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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL87105_cuf0 >transcript:BL87105_cuf0-protein ID=transcript:BL87105_cuf0-protein|Name=transcript:BL87105_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=392bp
NISGLVPNFDKCIILRMGPLKDTGFQLPCTFPVKWSDGPADLLGIHIPQD
MNTLISDNFSRKLQKVDRILQPWKGKTLTLYGKVTLINTLVVSQFTYLFM
SLPSPDAEFFQTYEKKVFKFLWSGGPERVKRNIVYNMYEYGGLKLINLEA
FNAALKAAWVPRMYLNKSWFCRKMLNHCIHFNYDIFPFLQLTEAHFHNVV
SKHSHLSTFFEEVMLAWLKAQKKPPDNMSEYLRQFLWFNSNILIDGLPFF
WETFSQRGILFVNDLLNMDGYFMTYRSFIGKYGRICDELKFIQLLSSIPF
KWKQSIQGISLCETAIMPVTKYSKWVKGLNKELYRFYLVERKCVDFHCKA
QEYWIELFNDQIQWDVVYSLTYKTTIDSYLRSFQFKFLHNFL Run BLAST on NCBI mRNA from alignment at Sc0001033:5205..6382- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL87105_cuf0 ID=transcript:BL87105_cuf0|Name=transcript:BL87105_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1178bp|location=Sequence derived from alignment at Sc0001033:5205..6382- (Branchiostoma lanceolatum)
AAATATTTCTGGGCTAGTGCCAAATTTTGACAAATGTATAATCTTAAGAA
TGGGTCCACTGAAGGACACTGGTTTTCAACTACCATGTACTTTTCCTGTT
AAGTGGTCAGATGGTCCAGCTGACCTTTTGGGAATTCACATTCCCCAAGA
TATGAACACTTTGATTTCTGATAATTTCAGTAGAAAACTACAAAAAGTAG
ATAGGATACTCCAGCCTTGGAAAGGAAAGACTCTTACCCTGTATGGCAAA
GTGACACTGATAAATACTTTGGTTGTTTCTCAGTTTACATACTTATTCAT
GTCACTGCCCTCTCCAGATGCTGAGTTTTTTCAGACTTATGAGAAAAAAG
TATTCAAGTTTCTTTGGTCAGGAGGGCCAGAACGTGTCAAAAGGAATATA
GTTTATAATATGTATGAATATGGTGGATTAAAACTGATCAATTTAGAAGC
CTTTAATGCTGCACTTAAGGCAGCATGGGTTCCTAGAATGTATTTGAACA
AAAGCTGGTTTTGTAGGAAGATGTTAAATCATTGTATACACTTTAACTAT
GATATTTTTCCATTCTTACAACTTACCGAAGCACACTTTCACAATGTTGT
TTCTAAACATTCACATTTAAGTACTTTCTTTGAAGAGGTGATGTTAGCCT
GGCTGAAGGCCCAGAAAAAACCTCCTGATAATATGTCTGAATACTTGAGA
CAATTTCTCTGGTTCAATTCCAATATACTTATTGATGGACTACCTTTTTT
CTGGGAAACCTTTAGCCAAAGAGGAATTTTGTTTGTTAATGATTTATTGA
ACATGGATGGATACTTTATGACATACAGATCATTTATTGGTAAATATGGA
AGAATTTGTGATGAGCTTAAATTCATACAATTGTTATCCAGTATTCCCTT
TAAATGGAAACAAAGTATTCAAGGTATTTCTCTATGTGAAACAGCTATTA
TGCCTGTTACAAAATATTCCAAGTGGGTAAAAGGACTTAACAAGGAATTG
TACCGTTTTTACTTAGTTGAAAGGAAATGTGTTGACTTCCATTGTAAAGC
TCAGGAATATTGGATAGAATTGTTTAATGACCAGATACAATGGGATGTAG
TTTACAGTCTCACCTATAAAACAACTATTGACTCCTATTTAAGATCCTTT
CAATTTAAGTTTTTGCATAATTTTCTTG Coding sequence (CDS) from alignment at Sc0001033:5205..6382- >transcript:BL87105_cuf0 ID=transcript:BL87105_cuf0|Name=transcript:BL87105_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1176bp|location=Sequence derived from alignment at Sc0001033:5205..6382- (Branchiostoma lanceolatum)
AATATTTCTGGGCTAGTGCCAAATTTTGACAAATGTATAATCTTAAGAAT
GGGTCCACTGAAGGACACTGGTTTTCAACTACCATGTACTTTTCCTGTTA
AGTGGTCAGATGGTCCAGCTGACCTTTTGGGAATTCACATTCCCCAAGAT
ATGAACACTTTGATTTCTGATAATTTCAGTAGAAAACTACAAAAAGTAGA
TAGGATACTCCAGCCTTGGAAAGGAAAGACTCTTACCCTGTATGGCAAAG
TGACACTGATAAATACTTTGGTTGTTTCTCAGTTTACATACTTATTCATG
TCACTGCCCTCTCCAGATGCTGAGTTTTTTCAGACTTATGAGAAAAAAGT
ATTCAAGTTTCTTTGGTCAGGAGGGCCAGAACGTGTCAAAAGGAATATAG
TTTATAATATGTATGAATATGGTGGATTAAAACTGATCAATTTAGAAGCC
TTTAATGCTGCACTTAAGGCAGCATGGGTTCCTAGAATGTATTTGAACAA
AAGCTGGTTTTGTAGGAAGATGTTAAATCATTGTATACACTTTAACTATG
ATATTTTTCCATTCTTACAACTTACCGAAGCACACTTTCACAATGTTGTT
TCTAAACATTCACATTTAAGTACTTTCTTTGAAGAGGTGATGTTAGCCTG
GCTGAAGGCCCAGAAAAAACCTCCTGATAATATGTCTGAATACTTGAGAC
AATTTCTCTGGTTCAATTCCAATATACTTATTGATGGACTACCTTTTTTC
TGGGAAACCTTTAGCCAAAGAGGAATTTTGTTTGTTAATGATTTATTGAA
CATGGATGGATACTTTATGACATACAGATCATTTATTGGTAAATATGGAA
GAATTTGTGATGAGCTTAAATTCATACAATTGTTATCCAGTATTCCCTTT
AAATGGAAACAAAGTATTCAAGGTATTTCTCTATGTGAAACAGCTATTAT
GCCTGTTACAAAATATTCCAAGTGGGTAAAAGGACTTAACAAGGAATTGT
ACCGTTTTTACTTAGTTGAAAGGAAATGTGTTGACTTCCATTGTAAAGCT
CAGGAATATTGGATAGAATTGTTTAATGACCAGATACAATGGGATGTAGT
TTACAGTCTCACCTATAAAACAACTATTGACTCCTATTTAAGATCCTTTC
AATTTAAGTTTTTGCATAATTTTCTT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0001033 | genome | Sc0001033:5205..6382 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL87105_cuf0 |
| Biotype | protein_coding |
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