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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL87065_cuf0 >transcript:BL87065_cuf0-protein ID=transcript:BL87065_cuf0-protein|Name=transcript:BL87065_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=433bp
MCEERTRISLLFPTVCNNTQGLTNVSNMENSSSVNTTNARIPYEDPLRTT
FLGKLLQLCWLVPSLVLILSLNCLFLVAILRTKKLWRPRFVLPASLCVLD
IVQGSLFIPSSAVNIVMGGNSSPAWFCWTQASFLFVGTVCTLSTLTLMAW
DRYQAICNALHYQINGSLQRLCAKIAVVWTFSVLLGALNVIIIYGNMAAP
NDIVVTYPFCSLMDLTLQVDTVDKRLTAISATYEIACIIVICFSYGKVYL
ETKRHQRRHMQNGRRHRQQRNTGNLRTEGTISAQLIVLFVFLVPRYVVLG
LYLSPRQEEKRVQMIILKRVTLLLYMTVPCFSNPVIYGLSSKDVRNAVVR
ICGRNVRRWKRRKSKVYEVSRSRAPSAGEEAVCRQVRMNSCRQKEIRILS
LNKLPEIDEHRDFVKSSKLSTDSIFLPPNNGYN Run BLAST on NCBI mRNA from alignment at Sc0000002:3698600..3701004- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL87065_cuf0 ID=transcript:BL87065_cuf0|Name=transcript:BL87065_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=2405bp|location=Sequence derived from alignment at Sc0000002:3698600..3701004- (Branchiostoma lanceolatum)
CGTCCTTGTCTGTCAAAAAACTAAGTATGGGTATGAAAAAAACACAGTTA
TAAATTTTTCAACAAAGAAGGTACTACTTCAATAACTCAACAGTACAACT
ACCAGTAAGTAACACATTATTGTTTAGTATGGCACAACAAAACAGTTATT
ACATGCCGTGCAAAGGCGGCGGTTTATGTTTGCATGCAGCAATGTATTGT
ACGAGTACTCGAGTGCTTGACTAGCCAAAGGTGTTTGCAGTGTTATGAAT
CGCGTGGAAACGACACCTAATGCGAAAGGACGGTCGTTCATTTTGGAAGA
GGGCACTAATGCATTTGCGACCGTTGTTCATCGCAAATGGGTAGAACTCA
CGAAAAACGGATTATTCAACTGGTTAATATCAGTTGATACCTGGCGACGT
CCGCCAAATACGCCAAAAATAGTTACTCAAGCAACTGGATAAGATTTTGA
AACAGTCAGACGATTCAGACAACATCTGCTATCTTTCGTAAGTGACTAAA
TAAGGATCTGGTAGAACTAGTTTTATACCAAAACTCTGAATAGATATGTT
AATGAATGGAAGACAATTTCAGATGGGAGACAATTTCAGTCCGCCAAATA
CTTTATCTTGTCGTTGAAGGCACGACTGATCTATGAGCGGAGAGCTCGAG
GAAACGCGAACTACCCTGCTTCCAACCGTCTGTACCAAGCTGCCTCTATC
AGACTTACTGCGACAGCGATAGGGGGAATATTATTTGTCAGGGAGGTTTG
GCCACCAGAGGGTTTCATTTGCAAGCTTCGCGGGCGAAATGTTTATTCTC
ACCGTGAACTGATCCTACTGGCCAACTATTCCTTTTTTGCCGAATTCTAC
GATCCATACGCCCGCAGGAAGGCCTGGTGAAGGCTAGCCAAGCTGCAGGA
TTTAATTAATGTGTCTAGATCTAACGTGGAGAACAGTAGTACTAGTTCTG
GCAACATAACCAAAGCTAGCATCCCCTAGGAAGACTCTTTCCAGACAACT
CTCCTGGGCAAACTTTTCCAGCTGTACTGAGAGACACGACTGAAATATGT
GCGAAGAGCGAACACGGATCAGTCTTCTGTTTCCAACCGTCTGTAACAAT
ACGCAGGGTCTAACAAATGTGTCGAACATGGAGAACAGCAGTTCTGTCAA
CACAACCAACGCTAGGATCCCCTACGAAGACCCTCTCCGGACAACTTTCC
TTGGCAAACTTCTCCAGCTGTGCTGGCTGGTCCCGTCCTTGGTACTGATA
CTCAGCCTGAACTGTCTCTTCCTCGTCGCCATCCTACGGACCAAGAAGCT
GTGGCGGCCACGGTTCGTCCTTCCCGCCAGTCTCTGCGTCCTGGACATCG
TCCAAGGCAGCCTCTTCATCCCCAGCTCGGCGGTGAACATCGTCATGGGA
GGGAACTCCAGCCCGGCTTGGTTCTGCTGGACGCAGGCGAGCTTCCTCTT
CGTCGGCACTGTCTGTACTCTGTCTACACTAACCCTCATGGCATGGGACC
GCTACCAAGCTATCTGCAACGCACTTCACTACCAAATAAACGGATCGCTA
CAACGCCTTTGTGCAAAAATTGCTGTCGTCTGGACATTTTCCGTCCTGTT
AGGTGCGTTGAACGTTATCATAATATACGGGAACATGGCCGCACCCAACG
ACATTGTTGTTACATACCCTTTCTGCAGTTTAATGGATTTGACACTACAA
GTAGATACTGTTGACAAGCGCCTGACAGCGATTTCTGCAACGTACGAAAT
AGCTTGTATTATAGTGATATGTTTTTCGTACGGAAAAGTGTACCTGGAAA
CAAAGAGACACCAGAGACGGCACATGCAGAATGGGCGACGCCACAGACAG
CAAAGGAACACAGGAAACCTGCGAACCGAAGGGACAATATCAGCTCAACT
AATCGTTCTCTTCGTATTCTTGGTACCACGCTACGTCGTTTTAGGTCTGT
ATCTTTCACCAAGACAGGAAGAGAAAAGGGTACAAATGATAATCTTGAAA
CGGGTGACACTGTTACTGTACATGACAGTGCCTTGCTTCAGTAACCCTGT
CATCTACGGGTTGAGCAGTAAGGACGTGAGAAACGCTGTGGTGAGAATAT
GTGGACGAAACGTAAGACGTTGGAAAAGAAGAAAAAGCAAGGTTTACGAA
GTGTCTCGATCGAGAGCACCGTCTGCAGGCGAGGAAGCCGTCTGTCGTCA
AGTCAGGATGAACTCGTGTCGTCAGAAGGAAATAAGAATATTGTCGCTGA
ACAAACTGCCAGAAATAGACGAACACAGAGACTTCGTAAAATCATCAAAA
CTATCCACCGACTCAATATTTCTCCCTCCTAACAACGGTTATAATTGATT
CTATGACCATTCTAAACCGCCGTTTTTTACCAATGAGATGAAAATAAAGA
TGGAC Coding sequence (CDS) from alignment at Sc0000002:3698600..3701004- >transcript:BL87065_cuf0 ID=transcript:BL87065_cuf0|Name=transcript:BL87065_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1302bp|location=Sequence derived from alignment at Sc0000002:3698600..3701004- (Branchiostoma lanceolatum)
ATGTGCGAAGAGCGAACACGGATCAGTCTTCTGTTTCCAACCGTCTGTAA
CAATACGCAGGGTCTAACAAATGTGTCGAACATGGAGAACAGCAGTTCTG
TCAACACAACCAACGCTAGGATCCCCTACGAAGACCCTCTCCGGACAACT
TTCCTTGGCAAACTTCTCCAGCTGTGCTGGCTGGTCCCGTCCTTGGTACT
GATACTCAGCCTGAACTGTCTCTTCCTCGTCGCCATCCTACGGACCAAGA
AGCTGTGGCGGCCACGGTTCGTCCTTCCCGCCAGTCTCTGCGTCCTGGAC
ATCGTCCAAGGCAGCCTCTTCATCCCCAGCTCGGCGGTGAACATCGTCAT
GGGAGGGAACTCCAGCCCGGCTTGGTTCTGCTGGACGCAGGCGAGCTTCC
TCTTCGTCGGCACTGTCTGTACTCTGTCTACACTAACCCTCATGGCATGG
GACCGCTACCAAGCTATCTGCAACGCACTTCACTACCAAATAAACGGATC
GCTACAACGCCTTTGTGCAAAAATTGCTGTCGTCTGGACATTTTCCGTCC
TGTTAGGTGCGTTGAACGTTATCATAATATACGGGAACATGGCCGCACCC
AACGACATTGTTGTTACATACCCTTTCTGCAGTTTAATGGATTTGACACT
ACAAGTAGATACTGTTGACAAGCGCCTGACAGCGATTTCTGCAACGTACG
AAATAGCTTGTATTATAGTGATATGTTTTTCGTACGGAAAAGTGTACCTG
GAAACAAAGAGACACCAGAGACGGCACATGCAGAATGGGCGACGCCACAG
ACAGCAAAGGAACACAGGAAACCTGCGAACCGAAGGGACAATATCAGCTC
AACTAATCGTTCTCTTCGTATTCTTGGTACCACGCTACGTCGTTTTAGGT
CTGTATCTTTCACCAAGACAGGAAGAGAAAAGGGTACAAATGATAATCTT
GAAACGGGTGACACTGTTACTGTACATGACAGTGCCTTGCTTCAGTAACC
CTGTCATCTACGGGTTGAGCAGTAAGGACGTGAGAAACGCTGTGGTGAGA
ATATGTGGACGAAACGTAAGACGTTGGAAAAGAAGAAAAAGCAAGGTTTA
CGAAGTGTCTCGATCGAGAGCACCGTCTGCAGGCGAGGAAGCCGTCTGTC
GTCAAGTCAGGATGAACTCGTGTCGTCAGAAGGAAATAAGAATATTGTCG
CTGAACAAACTGCCAGAAATAGACGAACACAGAGACTTCGTAAAATCATC
AAAACTATCCACCGACTCAATATTTCTCCCTCCTAACAACGGTTATAATT
GA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000002 | genome | Sc0000002:3698600..3701004 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL87065_cuf0 |
| Biotype | protein_coding |
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