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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL87044_cuf0 >transcript:BL87044_cuf0-protein ID=transcript:BL87044_cuf0-protein|Name=transcript:BL87044_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=228bp
MPANGSQKFLTAIFETFSTALEWISRKKLHIPFPTHILDDFLFANRSYHL
CERDLTAFSNMCVDVGIPLADDKTYSPNTIMTFLGIELDTIAMEARIPTD
KLHKCRDQLHSFLTVTSATLKQIQSLIGLLNHVCQVVLPGRAFLRRLIDL
TKSRSSPTTLIRIPTHVRQDLIMWYDFLSSFNGKSFFLEDSFTYDSTLHL
YTDAAASLGFGAVFQTSWLYGTWPHSFC Run BLAST on NCBI mRNA from alignment at xfSc0001152:350..2075- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL87044_cuf0 ID=transcript:BL87044_cuf0|Name=transcript:BL87044_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1726bp|location=Sequence derived from alignment at xfSc0001152:350..2075- (Branchiostoma lanceolatum)
TCTGAGGCCGAGGGACCTCCCACATTGACCCTTGCTAACCGCCTCGCTAA
CAAACAGCCCCTTACCCTCGATCGATGGCTAAACGCCTTCTCCATATTTC
ACTACGTCTACATACAAAACCACCCCTCCCGCAGTCCACAGCTCATCTCA
TACCAGTCCCTGATCCGCTCCCTGGCAGCTAAGGGAGCGGATTGGCAAAC
GTATGATGTCCTATTCCGTCAATACCGACAGGCCTTCCCGGCTGCCCCCT
GGGACGTTCCCCAGACGCACCTTTACGTTAATGCCCTGACCGACTCTAAA
CCTGCGTCGTCTTCCCCGCTCCCGTATCGCCGAGCGCAAACGCAATCTTC
TCCCACTCAAGTTCCAAAAGGGTACTGTTTTCGCTACCACGATGCCAACA
ATGACTGCACTCACGCCAACTGCAAGTACAAGCACATGTGCTACAAGTGC
AACAAGGCCCACAAAGCCTCCCTCTGCGACCATAGGTCCTCTACCGCCCA
TTCCTACTCCCGTCCGCGCTAGTACGCTTTGTCACTACCTTCAGGGATAT
ACTGACAAGGATAAACAATATCTTGTCAACGGCTTCACCTTTGGGTTTCC
TTTAGAATTTTTCGGTCCTAGATACGGATTCTCTCCAACTTTGCCGCCTC
AAGCCAAAAATTCACACAACCCTGTGATTTCCGATAAGCTCCACCAGGAG
CTACAATCTGGGCGTGTTGCTGGCCCATTCACTTCTCCCCCATTCCCAAA
TTTGTTCCTTTCCCCACTTTACGCCGTGCCCAAGAAAACGCCAGGTAAAT
TTCGCCTGATCCACGATCTCTCCTTTCCCCACGGGGCGTCGGTCAACGAC
TTTATCCCCCGAGAGCTCTCTACAGTGTCATATGCATCCATAGATACAGC
TATTAAGCACATCAAAACCTTAGGATCCGGCTGCTATCTCGCCAAAACAG
ACATACAATCTGCATTTCGCTTAATCCCTGTCCACCCAGATGACCACCAT
CTTCTTGGTTTCCGGTATAATAATGCATTCTACTACGATCGATGCCTGCC
AATGGGAGCCAAAAGTTCCTGACTGCCATATTCGAGACTTTTAGTACTGC
CTTGGAATGGATTTCCCGTAAGAAACTACACATTCCATTTCCCACCCACA
TTCTAGACGATTTTCTCTTTGCTAATCGGTCCTATCACCTCTGTGAACGA
GACTTGACAGCCTTCTCAAATATGTGCGTAGATGTCGGCATCCCATTGGC
CGACGACAAAACCTATTCGCCCAACACAATTATGACTTTCCTCGGCATCG
AATTGGATACAATCGCAATGGAAGCCAGAATCCCTACGGATAAACTACAC
AAATGCAGAGACCAACTCCACTCCTTTCTGACGGTCACATCTGCCACCCT
CAAACAAATCCAATCCCTCATTGGCCTATTGAACCACGTCTGTCAGGTAG
TCCTCCCTGGCCGAGCGTTCTTAAGGCGTCTTATCGACCTAACCAAATCA
CGATCTTCCCCAACAACACTAATTCGCATTCCCACCCACGTTCGTCAGGA
TCTAATCATGTGGTACGACTTCCTCTCTTCGTTTAACGGCAAATCCTTTT
TCCTCGAGGATAGTTTCACGTACGACTCAACTCTTCATCTATATACAGAC
GCAGCAGCCTCGCTGGGTTTCGGGGCCGTTTTCCAAACTTCCTGGCTTTA
CGGTACATGGCCCCACTCGTTCTGTG Coding sequence (CDS) from alignment at xfSc0001152:350..2075- >transcript:BL87044_cuf0 ID=transcript:BL87044_cuf0|Name=transcript:BL87044_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=684bp|location=Sequence derived from alignment at xfSc0001152:350..2075- (Branchiostoma lanceolatum)
ATGCCTGCCAATGGGAGCCAAAAGTTCCTGACTGCCATATTCGAGACTTT
TAGTACTGCCTTGGAATGGATTTCCCGTAAGAAACTACACATTCCATTTC
CCACCCACATTCTAGACGATTTTCTCTTTGCTAATCGGTCCTATCACCTC
TGTGAACGAGACTTGACAGCCTTCTCAAATATGTGCGTAGATGTCGGCAT
CCCATTGGCCGACGACAAAACCTATTCGCCCAACACAATTATGACTTTCC
TCGGCATCGAATTGGATACAATCGCAATGGAAGCCAGAATCCCTACGGAT
AAACTACACAAATGCAGAGACCAACTCCACTCCTTTCTGACGGTCACATC
TGCCACCCTCAAACAAATCCAATCCCTCATTGGCCTATTGAACCACGTCT
GTCAGGTAGTCCTCCCTGGCCGAGCGTTCTTAAGGCGTCTTATCGACCTA
ACCAAATCACGATCTTCCCCAACAACACTAATTCGCATTCCCACCCACGT
TCGTCAGGATCTAATCATGTGGTACGACTTCCTCTCTTCGTTTAACGGCA
AATCCTTTTTCCTCGAGGATAGTTTCACGTACGACTCAACTCTTCATCTA
TATACAGACGCAGCAGCCTCGCTGGGTTTCGGGGCCGTTTTCCAAACTTC
CTGGCTTTACGGTACATGGCCCCACTCGTTCTGT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| xfSc0001152 | genome | xfSc0001152:350..2075 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL87044_cuf0 |
| Biotype | protein_coding |
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