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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL86149_cuf0 >transcript:BL86149_cuf0-protein ID=transcript:BL86149_cuf0-protein|Name=transcript:BL86149_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=282bp
MLNVSQISMQVPSNADSVSLWDVPLFSGRVWKVQGKALPLCGPRLPETAS
EGYWFNGAWTSLRCQARRFRTVQSVVECLQNKTVFFRGDSTTRQWFRYLM
LLLKLQQHGRGSQPAFGIDEKNKIKFHFLFHKFPRNQMPVMDGNDMGYAA
EEIDGIAGGKDVVIILGLWAHFLAEPIQTFRSRLYGIRHAIERLHSRHPD
TKVIWRTPNTGHHHQFQHYVENSDWYAYQLLHIVKEILGDLNISIINVWE
MSESMWHDDNMHPPNDVIENHIDLVLSHLCPL Run BLAST on NCBI mRNA from alignment at xfSc0005744:1..1444- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL86149_cuf0 ID=transcript:BL86149_cuf0|Name=transcript:BL86149_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1444bp|location=Sequence derived from alignment at xfSc0005744:1..1444- (Branchiostoma lanceolatum)
CCTTGGTCCGAGGACCGCAACTCCAACTAACTTCTTAGACAAGTACATCT
TCCATGCTCAACTCTGGTCGGGTAGTTTACGGGCATTTTGTTGCACTTTT
GGGTGCTGCCCGTGGGGCTACCAGTGGCTGTCGGGTTTAAATCTTTTTAA
TCCGAAAAATTACTCAGGATCCAAGACGTTGAACGGGACCCCGCCGGATC
TCAGGCTTATTTTAACACGTCAACGTTTAGTTTATTGCAAATTCCTGCCC
GTAGGCTAATTGCAAGTACATATACATGTAACACGGAGTGGACGTACCGA
CAATAATAACAATATAACATATGACTACTCTAGTCTTAGCTACTGACACT
AAGTTATAACTTTTTGGGTTCGGCTTCTTTTTCGGAGACAGTGGAAGACG
ATGGGGAATTGCTTTGAAAATGTGACTGTAGCACGACTGTGAAAGCCGAT
GTCCGCCTTTAGAGCTCTAGATTCTGTACACTAGTATGTATCAATGCCTT
GTATTAAAACTGGAAACAACAGACAATGAAATTATGAGATGCTGAATGTA
TCTCAAATTTCCATGCAAGTGCCTTCAAATGCCGATTCCGTATCATTGTG
GGATGTTCCTCTTTTCTCAGGTCGCGTGTGGAAAGTTCAAGGAAAAGCGC
TGCCACTTTGCGGCCCACGGCTACCAGAGACAGCGTCTGAAGGATACTGG
TTCAACGGAGCCTGGACTTCGCTGAGATGCCAAGCCCGAAGATTTCGTAC
AGTCCAATCCGTCGTCGAATGTCTTCAGAACAAAACTGTGTTCTTTCGTG
GAGACTCAACAACCAGGCAGTGGTTTCGTTATCTCATGCTACTGCTAAAG
TTACAACAGCATGGCCGTGGGTCTCAACCGGCGTTTGGGATTGACGAGAA
AAATAAGATAAAATTCCATTTCCTTTTCCACAAGTTCCCGCGAAACCAAA
TGCCAGTGATGGACGGGAATGACATGGGATACGCGGCTGAGGAAATAGAC
GGCATTGCCGGTGGAAAAGATGTTGTTATCATTCTAGGTTTGTGGGCTCA
TTTTTTGGCTGAACCCATCCAAACCTTTCGTTCGCGGCTGTACGGAATTC
GCCACGCCATAGAACGGTTACACAGTCGTCATCCTGACACAAAGGTTATT
TGGAGAACGCCAAACACCGGTCACCATCATCAGTTTCAACACTATGTTGA
AAACAGTGATTGGTATGCATACCAGTTGTTACATATAGTCAAAGAAATCC
TCGGAGATTTGAACATTTCTATTATCAACGTTTGGGAAATGTCCGAGTCT
ATGTGGCATGATGACAACATGCATCCACCTAATGACGTAATCGAGAACCA
TATTGACCTGGTACTATCGCACTTATGCCCATTATAAGGGGTCGAACATG
GTAACTACATATGTTACATGTGTCGAACATGGTAACATCTCATA Coding sequence (CDS) from alignment at xfSc0005744:1..1444- >transcript:BL86149_cuf0 ID=transcript:BL86149_cuf0|Name=transcript:BL86149_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=849bp|location=Sequence derived from alignment at xfSc0005744:1..1444- (Branchiostoma lanceolatum)
ATGCTGAATGTATCTCAAATTTCCATGCAAGTGCCTTCAAATGCCGATTC
CGTATCATTGTGGGATGTTCCTCTTTTCTCAGGTCGCGTGTGGAAAGTTC
AAGGAAAAGCGCTGCCACTTTGCGGCCCACGGCTACCAGAGACAGCGTCT
GAAGGATACTGGTTCAACGGAGCCTGGACTTCGCTGAGATGCCAAGCCCG
AAGATTTCGTACAGTCCAATCCGTCGTCGAATGTCTTCAGAACAAAACTG
TGTTCTTTCGTGGAGACTCAACAACCAGGCAGTGGTTTCGTTATCTCATG
CTACTGCTAAAGTTACAACAGCATGGCCGTGGGTCTCAACCGGCGTTTGG
GATTGACGAGAAAAATAAGATAAAATTCCATTTCCTTTTCCACAAGTTCC
CGCGAAACCAAATGCCAGTGATGGACGGGAATGACATGGGATACGCGGCT
GAGGAAATAGACGGCATTGCCGGTGGAAAAGATGTTGTTATCATTCTAGG
TTTGTGGGCTCATTTTTTGGCTGAACCCATCCAAACCTTTCGTTCGCGGC
TGTACGGAATTCGCCACGCCATAGAACGGTTACACAGTCGTCATCCTGAC
ACAAAGGTTATTTGGAGAACGCCAAACACCGGTCACCATCATCAGTTTCA
ACACTATGTTGAAAACAGTGATTGGTATGCATACCAGTTGTTACATATAG
TCAAAGAAATCCTCGGAGATTTGAACATTTCTATTATCAACGTTTGGGAA
ATGTCCGAGTCTATGTGGCATGATGACAACATGCATCCACCTAATGACGT
AATCGAGAACCATATTGACCTGGTACTATCGCACTTATGCCCATTATAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| xfSc0005744 | genome | xfSc0005744:1..1444 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL86149_cuf0 |
| Biotype | protein_coding |
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