|
|
Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL86032_cuf0 >transcript:BL86032_cuf0-protein ID=transcript:BL86032_cuf0-protein|Name=transcript:BL86032_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=128bp
MMIRSAPLGLWVCLVLSVQVAHTQDHGYSQTEQTTRTENVDFCSTEEECQ
LDGKGQKGESETQEQSGFFKNLPKPPRLPTPSEILQKLPDGPPQLPDLSK
VMDKLPRAAELLKKLPKAREVIKKLPKL Run BLAST on NCBI mRNA from alignment at Sc0000009:2725684..2728480- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL86032_cuf0 ID=transcript:BL86032_cuf0|Name=transcript:BL86032_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=2797bp|location=Sequence derived from alignment at Sc0000009:2725684..2728480- (Branchiostoma lanceolatum)
CTTCACTCTACAAGGCAAAGAAAACAGTGCTGGCTTAGAAGACCTGGCGT
CTTCGGCTGCAAGGAGGGTTTCTGAGGTAAACAAACCGGTTTGGACCATG
CCACGGGCCCGAGTGCGTGTCTCAGCGACATTCGGGGACACAGGGACCTA
CTGTAGGAGCCAACATGAGCTATGATGATCAGGAGCGCTCCGCTTGGGCT
CTGGGTGTGCCTGGTATTGTCAGTGCAAGTCGCACACACTCAGGATCATG
GCTACTCACAGACTGAACAGACGACAAGAACAGGTAAGTATGGGAAGTTA
ACAATTACACAGTCGCCATAGTATAATTATTAACAACATGTCAGTAGTGC
TGTGTTGATATAAGCCTGCATACTGAGTGGTCACTAATAAATCTATGATA
GAACATGATATTTGCCTAGTTTGTCTAGGTAGTTTGATTTGACAACAAGC
CTTTATCAATGCCATAAAATTTACGGTGGATTTTGACAGAGCGTCATACT
ATATGACCAAATTCAAGCTAAATAACCTATAAACATAATCATTTCAATGA
ATATTTCGACAAACTGTCTTATCTGCTGATTGATGTAGATGAATTCGTAT
GTTATTCTGGTTGGAAATGTTGTTAGACGATTCTACTATTCAAATATCGT
TGGTTGACCTTTGACCTAATTTTCTTTCAGAGAACGTCGACTTTTGCTCA
ACAGAGGAAGAATGCCAACTCGACGGCAAAGGACAGAAAGGTACACATTA
CTAATGGTCTCTGGTTAACAAAAGTCTTTATACACACAACCAGTACAGTT
CAAGGGTCAAGGTCAAGTACTAGTACATAATCAGCTGCGGACGTTTCAGT
GGCCGTCTGTCACACATGGTTATACTTTGCACTGCAGCTAGGTGTCGCTG
CTGCATTGTGATGAAACAGTTCAGGAAAGATACACTTATTACCTTCGCCG
AGAAGGTTATGCAGAGGGTAGCGTTTGTATGTATGTATGTTTGTAGTGGC
ACAGCATAACTCAAGAACGCCTTGATGGATTGTCTTGGTATTTGGTATGT
TGGTAGGTCTTGATGAGACCTGAAAACGATTAGATTTTGGGCCCCCTAGC
GGCTTCTTACAGTACTGCAGCGGAACTTCCTGTTTTGATATCTCGTGTTC
TAGACATGCTATGGAACTGATATTTGAGTGGGAGATAGACCTTTGGACAG
AGAATAAGTGGTACGGGTTTGGCCCCCCTAGCGGCTTTTTTGGAGCAGGT
TTTGTGTCTGACTTTGAAAGGGAATAACTCAAGAAGGGCTTGATAGATGG
TAATGATTTTTGGTAAGTAGATAGCTTGAGTGATGATGTACATGATTAAA
TACTTCTTATGCAAATAAGTATCTAATTTGCAGAATTAATGAGGAAAGTT
TATACATCCGCCAAATTCCATGATAGGACTCTGAAACATGTGACATATGT
AACTGAGGAACAGAGAAATATTAATTGATATGAACTATGAACTATGCAAA
TGAAGACCTCATTTGCATAATAAATGAGAAAATACTATAACAAGATGGCC
ATGATGGATGGTCATGATTTTTGGTATGTGGACAGCTTATGTGATGCTTA
GTTTGATTGAACGATAATTATGCAAATCAGATTCTAATTTGCATAATTAA
TGAGGCAACTTTAAAAGTCCGCTTTGTTCCATCATATGACTATTCAAATT
GTAACTGAGGAAGAGAGGATAGTTAATAGATAGAAAATATGCAAATGTGG
GCCTAATTTGCATACTTAATGAGTAACTTGTATTATTCCACACTGGCAAA
TGACGGCAATTTCATACATTTAATCCTTTTTTGTGGCATTGTGAACTTAT
GTTAATGTGAACATCGTTGAATCAAATTATGTTAATAAGGGCCTCATTTG
CATAATTGATGATAAATATTAGCATAACATTTTTCGTTAAGCTCAAAATT
TGTCAAGTTCATACTATGGACATGTTATATTTTAAGATAATCAACTGGTA
TGATTTATAATTGATGAGAAACACTCATAATACGTCAGTCATAAAGGTTA
AAATCAGTTGGCGAAGGTATGAGATCGTGGAACTCTAGTTTGTTCATATT
TTCTAGCCCTCATTTCAAAGGGGAGGAAGAACAACAAACATACATAAGGA
ATAGGAAAATAACACGTAACATATGTAATTGATTCTCTGGCATGATAAAT
TGACACTGAAAACAACGATACTAGACAACAAGCTTACTTCTACATCTACA
TTAGGTTACCCCCAAATAACCCCTTCGGTGGCAAAGTAGGGGGGTGGAGT
TGAGGTCCCGGGCTAAGGCGGGCAGGCCTCCAGCCTGGCACGGAACGATC
AACGGTGGTGGCCGTCGCAACCGTGCCAGGCAGGGCATTGCACTGTGGGA
TAGTACGGGGAAAGAAAGAGTGTTTATATGTTTCGGTTCTTCCGTGGATG
GTGTAAAACTTGAGGTCGTGGCTCCCCCGGGTGCGTCCCTGGGCTGGTTT
CAGCAAACTGTAAGACGGCAGGCTTACGCCATAGCTGTTTACCATGATAT
ACTTTGTGAAAGATATGTGTGGTTATCTCTATAGGTGAATCTGAGACTCA
GGAACAATCCGGCTTCTTCAAAAACCTACCGAAGCCGCCCAGACTACCGA
CGCCGTCAGAAATTCTACAGAAGTTGCCGGATGGCCCGCCTCAGCTCCCT
GACCTCTCTAAGGTCATGGATAAGTTACCCAGAGCTGCTGAATTGTTGAA
AAAGTTGCCAAAAGCGCGAGAAGTCATCAAGAAATTGCCGAAGCTGC Coding sequence (CDS) from alignment at Sc0000009:2725684..2728480- >transcript:BL86032_cuf0 ID=transcript:BL86032_cuf0|Name=transcript:BL86032_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1152bp|location=Sequence derived from alignment at Sc0000009:2725684..2728480- (Branchiostoma lanceolatum)
ATGATGATCAGGAGCGCTCCGCTTGGGCTCTGGGTGTGCCTGGTATTGTC
AGTGCAAGTCGCACACACTCAGGATCATGGCTACTCACAGACTGAACAGA
CGACAAGAACAGAGAACGTCGACTTTTGCTCAACAGAGGAAGAATGCCAA
CTCGACGGCAAAGGACAGAAAGGTGAATCTGAGACTCAGGAACAATCCGG
CTTCTTCAAAAACCTACCGAAGCCGCCCAGACTACCGACGCCGTCAGAAA
TTCTACAGAAGTTGCCGGATGGCCCGCCTCAGCTCCCTGACCTCTCTAAG
GTCATGGATAAGTTACCCAGAGCTGCTGAATTGTTGAAAAAGTTGCCAAA
AGCGCGAGAAGTCATCAAGAAATTGCCGAAGCTGATGATGATCAGGAGCG
CTCCGCTTGGGCTCTGGGTGTGCCTGGTATTGTCAGTGCAAGTCGCACAC
ACTCAGGATCATGGCTACTCACAGACTGAACAGACGACAAGAACAGAGAA
CGTCGACTTTTGCTCAACAGAGGAAGAATGCCAACTCGACGGCAAAGGAC
AGAAAGGTGAATCTGAGACTCAGGAACAATCCGGCTTCTTCAAAAACCTA
CCGAAGCCGCCCAGACTACCGACGCCGTCAGAAATTCTACAGAAGTTGCC
GGATGGCCCGCCTCAGCTCCCTGACCTCTCTAAGGTCATGGATAAGTTAC
CCAGAGCTGCTGAATTGTTGAAAAAGTTGCCAAAAGCGCGAGAAGTCATC
AAGAAATTGCCGAAGCTGATGATGATCAGGAGCGCTCCGCTTGGGCTCTG
GGTGTGCCTGGTATTGTCAGTGCAAGTCGCACACACTCAGGATCATGGCT
ACTCACAGACTGAACAGACGACAAGAACAGAGAACGTCGACTTTTGCTCA
ACAGAGGAAGAATGCCAACTCGACGGCAAAGGACAGAAAGGTGAATCTGA
GACTCAGGAACAATCCGGCTTCTTCAAAAACCTACCGAAGCCGCCCAGAC
TACCGACGCCGTCAGAAATTCTACAGAAGTTGCCGGATGGCCCGCCTCAG
CTCCCTGACCTCTCTAAGGTCATGGATAAGTTACCCAGAGCTGCTGAATT
GTTGAAAAAGTTGCCAAAAGCGCGAGAAGTCATCAAGAAATTGCCGAAGC
TG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000009 | genome | Sc0000009:2725684..2728480 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL86032_cuf0 |
| Biotype | protein_coding |
|
