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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL85602_cuf0 >transcript:BL85602_cuf0-protein ID=transcript:BL85602_cuf0-protein|Name=transcript:BL85602_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=135bp
KRDPTTRYKKELVSVLQDIEKEGGINFITYRRLYPTTETPPKSYGLPKIH
KPDTPLRPIISSIGSITYNSARFLADTLSPLVGKSEHHIVNSQQFAELIK
HRTKAPSTEQQEPGNKLPGTFDQLLTSHIRNDTCQ Run BLAST on NCBI mRNA from alignment at xfSc0004840:1..1579- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL85602_cuf0 ID=transcript:BL85602_cuf0|Name=transcript:BL85602_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1579bp|location=Sequence derived from alignment at xfSc0004840:1..1579- (Branchiostoma lanceolatum)
GAAAAAGAGACCCTACCACTAGATACAAGAAAGAACTGGTTTCTGTCCTG
CAAGACATCGAGAAGGAAGGGGGGATCAACTTTATCACTTACCGACGATT
GTACCCTACAACCGAAACACCACCGAAATCCTATGGTCTGCCAAAGATAC
ACAAACCCGACACACCACTGAGGCCAATCATTAGCAGCATTGGTTCCATC
ACTTACAACAGCGCCAGATTCCTTGCAGACACTCTGTCACCACTGGTTGG
GAAATCAGAACATCATATCGTGAATTCTCAACAGTTTGCAGAACTCATCA
AACACCGCACCAAAGCTCCCTCAACAGAACAACAGGAACCTGGGAACAAA
CTTCCCGGCACGTTTGACCAATTGCTGACTTCACATATCCGTAATGACAC
GTGTCAATAAAGTCACGTGTCTGTAACTCTCGCAAGTTTACGTTCGGCAG
TGATTGCTCATTATTGATCCTGAAGAAGGCAACAGTGGTCGTCGAAAATT
TGATCCGTGAATACCTTATATATATAGTGTTGGAAGAAAGTTATTTAGTG
ATCCCTTTAGTTTCATGCGCCTAGTGTACCGGTAATTAGACTGAAGCAGA
ACGCAATCCGTTTTTCGTTGGTAATGCACCGTTCCCATTGAACACCATAT
AGAACACCCTATTTTACATGTATTTGGAACACCTCCGTGGTACCAGCGCT
GGTAGGACAGAAATGACAAGCAGGGTTTGTATATCTGTGACAGATTTCTT
ACTGCATTGGCTACATGAATGCTCAGGAAAAAAAGAAAAAAAGAAAAAGA
AAACATCTTGGGCACTCAAGGGGACGAAGCTTATAACACACTGCCAACTA
CATGTACGTCTAAGTCTGCTAGTGCAGAGTACCGTCTCTTTTGTAGTAAT
GTGCCTAATTCTGGTGTTAGACTGGAATAGGTTCCGGCAACGTGACGCCA
GGCTCCAAGAAGTCGGAAAATTTGAAGGAAAAAAAATGGCTGCTCCCAGT
GGCGCTGACAGCGCTTTGATTTTGTACCAGTGCTCATTACACAACGATAT
CGCATCTTTGCTCCTTGAATGTCGATATTTAATGGTAATTAATAGTGTTA
TTGAAACTTACTATGTGTAGAAATGACTAAAAATTGGAGTTTTCTAATTC
ATGTTTGAAGCCACATAAAGTGCTCTGAGTGCCTTTAAAAGTCAGAACAA
GTGTAAAGTGGGCCTAATTCAATCATCAGGCAAGTATATAAAGTGTAGCC
GTCAGCACCAAGACACAGTGTGAGTTGAAAATGGTGCGAGAGCCCTGAAC
TTTGACGGACATAATGTAGAACAAGGGAGAACTTGACTTTGGGTTGTATT
TAGCGTATACGCGAAGTAATAGCAGGCTTTTTAATTTTAAGTTTGGCCCC
CCTTTAACATTTCCTCATTGCCTATGCAAATGATGTCCATTATAATGAAA
GCTCATCTGTGTTGGTAGTAATCATAATACAATGCTAAACTTTCTTCCAA
CACGTTAAGACGTTACTCCACAGAGCTGACACGATCATAACGGATCCACA
CGACAGAGAGACAGAGAAACAACACATCA Coding sequence (CDS) from alignment at xfSc0004840:1..1579- >transcript:BL85602_cuf0 ID=transcript:BL85602_cuf0|Name=transcript:BL85602_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=408bp|location=Sequence derived from alignment at xfSc0004840:1..1579- (Branchiostoma lanceolatum)
AAAAGAGACCCTACCACTAGATACAAGAAAGAACTGGTTTCTGTCCTGCA
AGACATCGAGAAGGAAGGGGGGATCAACTTTATCACTTACCGACGATTGT
ACCCTACAACCGAAACACCACCGAAATCCTATGGTCTGCCAAAGATACAC
AAACCCGACACACCACTGAGGCCAATCATTAGCAGCATTGGTTCCATCAC
TTACAACAGCGCCAGATTCCTTGCAGACACTCTGTCACCACTGGTTGGGA
AATCAGAACATCATATCGTGAATTCTCAACAGTTTGCAGAACTCATCAAA
CACCGCACCAAAGCTCCCTCAACAGAACAACAGGAACCTGGGAACAAACT
TCCCGGCACGTTTGACCAATTGCTGACTTCACATATCCGTAATGACACGT
GTCAATAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| xfSc0004840 | genome | xfSc0004840:1..1579 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL85602_cuf0 |
| Biotype | protein_coding |
|
