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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL85373_cuf0 >transcript:BL85373_cuf0-protein ID=transcript:BL85373_cuf0-protein|Name=transcript:BL85373_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=118bp
MKDMSCHSPDNDTVYLIVGGGGAAIACAETLRQEGFKGKVVMATKEPHLP
YDRPKLSKALDSTGEALALRDKNFFSVYDIEVLTEKEATSVDCPSKVVTF
ADGQTIAYDKLLIATGGK Run BLAST on NCBI mRNA from alignment at Sc0000196:239049..240302+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL85373_cuf0 ID=transcript:BL85373_cuf0|Name=transcript:BL85373_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1254bp|location=Sequence derived from alignment at Sc0000196:239049..240302+ (Branchiostoma lanceolatum)
TAATGTCACATCTACTTTTTGTTGCATGTTAAGGTAACTTTGCCCTTCTT
TTTAGGTTCTTGAGAAGCCCAAGAGGATGAAGGATATGTCTTGTCACTCT
CCAGACAATGACACAGTGTATCTCATTGTAGGAGGAGGTAAGGGTAATTC
CTTATCAAGTATCATGCCCAATACGTTTATGAATGTTAAACATCCAGGTA
AGCAAATAGAGTGGTACAATTTAAGCATTACTACTGGACAAAATATGATA
AAAATCATATACGATAAAAATCGTATTTTGTCCAGTAGTAATGTTTAAAT
TGTACCACTCTATCATGCCCAATGTTCTAGAATCAACATTGTAAAAAATT
ACTGATCTTATCACGTCTCTGATATCTCACCATGTACATAAATCTTCAAT
TGTTGCCCTGCAATAGTCACAAGAAATTTCAGAAAATTAACAGCAGATAG
ATAATGAGAGTGTCTGTTGTGAGTCATGATATGTCATGTTTCTAGTAATT
AGTCTACTTTGGTACATTAATATATAACGGTAGTTTAACTAAGTAATAAG
TTCCACTCACACACTGCTGTACATTAATATTGTCATGTCATCACACATGT
ACTGCTGTACATTAATATTGCCATGTAATTTTATCACTGCCCTCTAGGTG
GCGCTGCCATAGCCTGTGCAGAGACCCTCAGACAAGAAGGTTTCAAGGGG
AAGGTTGTCATGGCAACAAAGGAGCCACACCTACCCTATGACAGACCCAA
ACTGAGCAAGGTGAAACTAGCACTTAATGAATATTACTTCTTTGATTTCT
ATTATGTTACTGTTGGCGCAATTGTTGTTTGAATTTGTTTGTGTTTCATA
TATAACAGTTTCTATAATCTGTCTTACCATTTCAGGCTCTAGATTCCACA
GGAGAGGCCTTGGCACTCAGGGACAAGAACTTTTTCTCAGTGTATGATAT
TGAAGTCCTAACAGAGAAAGAGGTAAGACAAATGCTTGGGAAACATATGG
ATTGCTGGCTTATTTTAAAACTATCAGTTACTGTAGGTTTTAACCAGTAT
CATCAATGCAGTCGATCAGTCTGAATAAGACAGTACATTGCTAGGAATGT
ATTTCTTATAGCGTCTTTCTTGATTCTAGGCCACCTCTGTGGACTGCCCC
TCTAAGGTGGTGACATTTGCAGATGGACAGACAATAGCTTATGACAAACT
CCTCATTGCAACAGGTGGCAAGTAAGTTCTAATGGTCTTTTTCCATACTC
CTGA Coding sequence (CDS) from alignment at Sc0000196:239049..240302+ >transcript:BL85373_cuf0 ID=transcript:BL85373_cuf0|Name=transcript:BL85373_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1428bp|location=Sequence derived from alignment at Sc0000196:239049..240302+ (Branchiostoma lanceolatum)
ATGAAGGATATGTCTTGTCACTCTCCAGACAATGACACAGTGTATCTCAT
TGTAGGAGGAGGTGGCGCTGCCATAGCCTGTGCAGAGACCCTCAGACAAG
AAGGTTTCAAGGGGAAGGTTGTCATGGCAACAAAGGAGCCACACCTACCC
TATGACAGACCCAAACTGAGCAAGGCTCTAGATTCCACAGGAGAGGCCTT
GGCACTCAGGGACAAGAACTTTTTCTCAGTGTATGATATTGAAGTCCTAA
CAGAGAAAGAGGCCACCTCTGTGGACTGCCCCTCTAAGGTGGTGACATTT
GCAGATGGACAGACAATAGCTTATGACAAACTCCTCATTGCAACAGGTGG
CAAGTAAATGAAGGATATGTCTTGTCACTCTCCAGACAATGACACAGTGT
ATCTCATTGTAGGAGGAGGTGGCGCTGCCATAGCCTGTGCAGAGACCCTC
AGACAAGAAGGTTTCAAGGGGAAGGTTGTCATGGCAACAAAGGAGCCACA
CCTACCCTATGACAGACCCAAACTGAGCAAGGCTCTAGATTCCACAGGAG
AGGCCTTGGCACTCAGGGACAAGAACTTTTTCTCAGTGTATGATATTGAA
GTCCTAACAGAGAAAGAGGCCACCTCTGTGGACTGCCCCTCTAAGGTGGT
GACATTTGCAGATGGACAGACAATAGCTTATGACAAACTCCTCATTGCAA
CAGGTGGCAAGTAAATGAAGGATATGTCTTGTCACTCTCCAGACAATGAC
ACAGTGTATCTCATTGTAGGAGGAGGTGGCGCTGCCATAGCCTGTGCAGA
GACCCTCAGACAAGAAGGTTTCAAGGGGAAGGTTGTCATGGCAACAAAGG
AGCCACACCTACCCTATGACAGACCCAAACTGAGCAAGGCTCTAGATTCC
ACAGGAGAGGCCTTGGCACTCAGGGACAAGAACTTTTTCTCAGTGTATGA
TATTGAAGTCCTAACAGAGAAAGAGGCCACCTCTGTGGACTGCCCCTCTA
AGGTGGTGACATTTGCAGATGGACAGACAATAGCTTATGACAAACTCCTC
ATTGCAACAGGTGGCAAGTAAATGAAGGATATGTCTTGTCACTCTCCAGA
CAATGACACAGTGTATCTCATTGTAGGAGGAGGTGGCGCTGCCATAGCCT
GTGCAGAGACCCTCAGACAAGAAGGTTTCAAGGGGAAGGTTGTCATGGCA
ACAAAGGAGCCACACCTACCCTATGACAGACCCAAACTGAGCAAGGCTCT
AGATTCCACAGGAGAGGCCTTGGCACTCAGGGACAAGAACTTTTTCTCAG
TGTATGATATTGAAGTCCTAACAGAGAAAGAGGCCACCTCTGTGGACTGC
CCCTCTAAGGTGGTGACATTTGCAGATGGACAGACAATAGCTTATGACAA
ACTCCTCATTGCAACAGGTGGCAAGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000196 | genome | Sc0000196:239049..240302 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL85373_cuf0 |
| Biotype | protein_coding |
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