|
|
Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL84988_cuf0 >transcript:BL84988_cuf0-protein ID=transcript:BL84988_cuf0-protein|Name=transcript:BL84988_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=151bp
RRWRFQFAPEKSKCVVFGQSKKKNPSTEPNTGWRMGASTIPEVSQVTHVG
VIHEAGLRSASATEKACQKGKGKTSAILATGLEGRRLNPVTTKKLYHTLV
LPSMLHGCQLWFPTSTEMQKLERVKFTTRSYYPACCTDMSYGSQLPQKCR
H Run BLAST on NCBI mRNA from alignment at Sc0000189:556797..558262- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL84988_cuf0 ID=transcript:BL84988_cuf0|Name=transcript:BL84988_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1466bp|location=Sequence derived from alignment at Sc0000189:556797..558262- (Branchiostoma lanceolatum)
GAAGGAGATGGCGTTTCCAGTTTGCTCCGGAAAAGAGCAAGTGTGTAGTT
TTTGGGCAGAGTAAGAAGAAAAACCCCTCAACAGAGCCAAACACGGGATG
GAGAATGGGAGCAAGTACTATCCCAGAAGTCTCCCAAGTAACACATGTAG
GGGTAATACACGAAGCCGGCCTGCGATCAGCCAGTGCAACAGAAAAAGCT
TGTCAGAAGGGAAAGGGGAAGACAAGTGCAATATTAGCCACTGGTTTGGA
AGGTAGGAGGCTGAACCCTGTCACCACCAAAAAGCTCTACCACACGCTCG
TACTACCCAGCATGTTGCACGGATGTCAGCTATGGTTCCCAACTTCCACA
GAAATGCAGAAACTAGAGAGGGTNAAGTTCACCACACGCTCGTACTACCC
AGCATGTTGCACGGATATGAGCTATGGTTCCCAACTTCCACAGAAATGCA
GACACTAGAGAGGGTTCATAGGGCGAGTGCAAAGCGTATGCAGGGCATGA
ACTTTCAGACCGAGACAAATGCGAGCCTTTCAGCCCTTGGAATGATGCCG
CTCAGAGCGATACTGAACAAACACAAGCTACTGCTGTTTGGGAGACTGAC
AACACTACACCACACATGCTTGGCGAAGAAGATCTTCTTATACAGGTTAT
ACTCACATGTGTTAACCTCAAGCAAAAGGAAGACAGAAGGATTCCTGGGA
GACTGCTTCGAGATTGCAGAGCAATGTGGTCTACAAGTGTACCTAGAACA
GTACTAGATCACAGTGGAATTCCCAGGCAAAGACCAGTGGAAGACCATAG
TAAAGACAGCGATAGAAGAAACGGAAGAGCGGAGATGGAGAGAGAGGGTA
AATGACCGCACAACATGCCCCAGATTCTACAAGATACATGAGACAAACAG
GAGACCACACAAACTATGGCACCTGGCAAAGAAGAAGCCCACACATAGAG
AGAACCTTCAAAGGGTCATACACATGAGTACAGCGCCAACAGAGCAAATA
CCCAGACCATGCCCCACATGCGGAACGGCAACGCAGGATGTAGTAGGACA
CTTTATCACACAGTGTTCAACCTTTAATTCGACAAGGGATGCATTGATGG
ATAACATCACAGACTATCTGGGAACAAACGTGGCTGCAAATATATACCAA
CAGCAAGATGAGAGGCTTGTTGAAGTGTTGCTGGGGGCTAGAGTTGCGGA
AGAGGTGTCAGAGGAACAGTGGGAAGAGTTTATGACAACAGCAGCACAAA
CCATTAAACCGTTAGCAATAATGGCACTGAAGCACACGAGATGGAAATGA
TAGCAACAGCCTGCAACACACGCGCAAAGAACAAAGAACTTACAGACATT
GATATAGTAAAACCCAGGAACTGAGACGAACAGAAACTTTAACTATACCT
GGTAATTAGAGTCAGGAAAGGACACCAGAGAATGTATGTAAGGGTCACAA
TGTGGAAACTGTGAAA Coding sequence (CDS) from alignment at Sc0000189:556797..558262- >transcript:BL84988_cuf0 ID=transcript:BL84988_cuf0|Name=transcript:BL84988_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=456bp|location=Sequence derived from alignment at Sc0000189:556797..558262- (Branchiostoma lanceolatum)
AGGAGATGGCGTTTCCAGTTTGCTCCGGAAAAGAGCAAGTGTGTAGTTTT
TGGGCAGAGTAAGAAGAAAAACCCCTCAACAGAGCCAAACACGGGATGGA
GAATGGGAGCAAGTACTATCCCAGAAGTCTCCCAAGTAACACATGTAGGG
GTAATACACGAAGCCGGCCTGCGATCAGCCAGTGCAACAGAAAAAGCTTG
TCAGAAGGGAAAGGGGAAGACAAGTGCAATATTAGCCACTGGTTTGGAAG
GTAGGAGGCTGAACCCTGTCACCACCAAAAAGCTCTACCACACGCTCGTA
CTACCCAGCATGTTGCACGGATGTCAGCTATGGTTCCCAACTTCCACAGA
AATGCAGAAACTAGAGAGGGTNAAGTTCACCACACGCTCGTACTACCCAG
CATGTTGCACGGATATGAGCTATGGTTCCCAACTTCCACAGAAATGCAGA
CACTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000189 | genome | Sc0000189:556797..558262 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL84988_cuf0 |
| Biotype | protein_coding |
|
