transcript:BL84394_cuf0 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL84394_cuf0
Unique Nametranscript:BL84394_cuf0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



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Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL84394_cuf0

>transcript:BL84394_cuf0-protein ID=transcript:BL84394_cuf0-protein|Name=transcript:BL84394_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=143bp
RIFRIFRIFRIFRIFRIFRIFRIFRIFRIFRIFRIFRIFRIFRIFRIFRI
FRIFRIFRIFRIFRIFRIFRIFRIFRIFRIFRIFRIFRIFRLTAVTVTET
LLHIFNSCLQNGYYPKELSLFINPGTPCPQTTCYRGISIICCL
Run BLAST on NCBI

mRNA from alignment at Sc0000049:525092..525521-

Legend: CDSpolypeptideexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL84394_cuf0 ID=transcript:BL84394_cuf0|Name=transcript:BL84394_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=430bp|location=Sequence derived from alignment at Sc0000049:525092..525521- (Branchiostoma lanceolatum)
CGGATATTCCGGATATTCCGGATATTCCGGATATTCCGGATATTCCGGAT
ATTCCGGATATTCCGGATATTCCGGATATTCCGGATATTCCGGATATTCC
GGATATTCCGGATATTCCGGATATTCCGGATATTCCGGATATTCCGGATA
TTCCGGATATTCCGGATATTCCGGATATTCCGGATATTCCGGATATTCCG
GATATTCCGGATATTCCGGATATTCCGGATATTCCGGATATTCCGGATAT
TCCGGATATTCCGGATATTCCGTCTGACTGCTGTCACTGTCACGGAAACA
CTCCTACACATCTTCAACTCCTGTCTACAAAATGGTTACTATCCTAAAGA
ATTGTCCCTATTCATTAATCCGGGGACACCTTGTCCCCAGACAACATGCT
ATCGGGGAATATCAATAATTTGTTGTCTGG

Coding sequence (CDS) from alignment at Sc0000049:525092..525521-

>transcript:BL84394_cuf0 ID=transcript:BL84394_cuf0|Name=transcript:BL84394_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=429bp|location=Sequence derived from alignment at Sc0000049:525092..525521- (Branchiostoma lanceolatum)
CGGATATTCCGGATATTCCGGATATTCCGGATATTCCGGATATTCCGGAT
ATTCCGGATATTCCGGATATTCCGGATATTCCGGATATTCCGGATATTCC
GGATATTCCGGATATTCCGGATATTCCGGATATTCCGGATATTCCGGATA
TTCCGGATATTCCGGATATTCCGGATATTCCGGATATTCCGGATATTCCG
GATATTCCGGATATTCCGGATATTCCGGATATTCCGGATATTCCGGATAT
TCCGGATATTCCGGATATTCCGTCTGACTGCTGTCACTGTCACGGAAACA
CTCCTACACATCTTCAACTCCTGTCTACAAAATGGTTACTATCCTAAAGA
ATTGTCCCTATTCATTAATCCGGGGACACCTTGTCCCCAGACAACATGCT
ATCGGGGAATATCAATAATTTGTTGTCTG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL84394gene:BL84394Branchiostoma lanceolatumgene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL84394_cuf0-E1BL84394_cuf0-E1-1564476830-223410Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL84394_cuf0transcript:BL84394_cuf0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000049genomeSc0000049:525092..525521 -
Properties
Property NameValue
Transcript idBL84394_cuf0
Biotypeprotein_coding