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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL84064_cuf0 >transcript:BL84064_cuf0-protein ID=transcript:BL84064_cuf0-protein|Name=transcript:BL84064_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=108bp
MLRFTTPTDPMFQTVRHLRTFDSSCVYTGPLSTTRASGSPYPAKCHQLAT
AVAQAQGQEDKTRCGNIYGTGKANKSQKKEETSFPQTNITKVTQVLGWAI
ENSVFLQD Run BLAST on NCBI mRNA from alignment at Sc0000747:29121..31342+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL84064_cuf0 ID=transcript:BL84064_cuf0|Name=transcript:BL84064_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=2222bp|location=Sequence derived from alignment at Sc0000747:29121..31342+ (Branchiostoma lanceolatum)
CGTCACCAATCTGCAACGGCAAAGGCATCTGACAAGGCGGCTGTCTGTAA
GGATATTATCCCGTACTTCAGTTGTTTTTACACGTTCGGACTGATACATA
GGCGAGTGGAATCGGTCGGTAAACCCAGGACGATAGAGAACCGCGCAAAC
AGAGGAAAACTAAGCTAACAAGACTGACAATGATAAAAAGACATTGCCAT
GGCGACGGTGGTTGTTGTTTTAATTTTTACTGTACCCTGCTTAGGGCACA
GTGATAGGTGGTGCTGTTCATGCAGGATTTCTAACAAAAAGGCTGACGGG
TACCTGTTCTACTGGACAAATACACACACACACAGACACGCACACACACA
GACAGACAGCGACAGTTCCACTAGATTCTACCAGACACACCCCACTGCCA
GAACAAACATCGATTTCATCACAGCCTGATCATGACAACTGAAAACAGCC
CACGGACCGGGTTCCCACCATACAAAATGACTATTCTACTCTGATAGGAC
TGCTGTTTACATGAACAACATGTTAGGCCAAATCTACACAAATTCTAACA
TCATAGTCCACTTACCAACAGACACAGCATACACCATGCAACAGTTTGTA
CACTTATGTTCCCTGAACTATAGAACTAAGTCCTCTAGAGCGTGAATGGC
CAGGGATGTTAGCTAAGGATGGAATGCCAGGATGGAATCCCATGATGGAA
TGCCAGGATGGAATCCCAGGATGGAATTCCAGGATGGAATGCCAGGATGG
AATCCCATGATGGAATGCCAGGATGGAATGCCAGGATGGAATGCCAGGAT
GGAATGCCAGGATGGAATTCGAGTCCCACTGGAATACCAGGCACACCAGT
CGTAAAGGAATTTGCCAGTAATAGACCGATCCCGAAGCCACGCCCCCCTT
AGCAACGCCCTAGCAACTCGAACACCTCCGTCAAAATCAGCCACATGTCC
GTCAAAATGGCGGCGCCGGCTCTGTTGGCGGTTTTGCCACCCGACATTAG
TTTATCCTTTTTTGGCGACGAAAGGTTGTCAGAGCGGGGAAAGAAGAGGG
GCTATTCATTTTTTATGTCCTCCTATGTTCATGATGTTTTTTTGGCGCCG
GAGGAGGGTGACGTAGTCGGGGTAAAAGCCCGATGTTACCGATCAATGCG
GAAACATGAGTCGCCACACAAACTGCACATGCTGTTTGACAGGAAGGACA
GATCCATAACAAGCTCCAATTGCACTTGTGTAGTGGGGTACGTATTTTTG
TGACTGAGGTTTCGTTGCCCTTGTTGCTACATATATGGAGAGAAAAATAG
AAAAACATCCACGGCCGGTTGGGTCAAAATACAGTTCGGGCAAACGTAGG
GAGGGGGGCAATCGATAGTTTGAAAGAAACGTTCACACTAACGTTATAGC
GCTATTCAGAGAACTCAAGACAAAGAAGTCTTCAGGTTGAGTTCAAACTG
AAGTGAAATAAAAAACACCATTTACTTTGATACATTAAACTATCGAATTC
GTTCTTAGTTTGATCCAGACGCGTCAGTTACATGCTCGTGTTGTGGCATG
CAGAAGCGCCATTACAAAACAACATGACACACTGCCGACATTCAACTCTT
TTCAACACGTTGTTGAGTTGTCCTAAATCTTTGTGTACATTCCTCATTTC
TAAAGTACAGATATTTCTTCAAATTAAAGAGGTTATGACCTCCGTGTTCA
AATATACTAACTCTTCTAACGAACCTACATGAAGAGAGATTGATCTATCC
AAAATGACGGATGTAATGCCTGAATGCTGAGATTTACAACTCCCACTGAT
CCAATGTTTCAGACTGTCCGGCACCTGCGCACATTTGATAGCTCTTGTGT
ATACACTGGCCCATTATCAACAACAAGGGCTAGTGGAAGTCCCTACCCAG
CCAAGTGCCACCAGCTTGCCACAGCAGTGGCACAAGCCCAGGGGCAAGAA
GATAAAACCAGATGCGGTAACATCTATGGTACTGGCAAAGCCAACAAAAG
TCAAAAGAAAGAGGAAACCAGTTTTCCACAAACCAACATCACAAAGGTAA
CCCAGGTTCTGGGATGGGCGATTGAAAATTCTGTTTTTCTGCAAGACTAA
AGATGCACTTGATTCAACTAAAAATGGACGATTGACAAATAGCCTTGACA
AAACGACATGACATGCTGCAGAGACTCAACTTGTTGAAGGATAGTAGTTG
AAGGAAGTTCAATTAAAATTTG Coding sequence (CDS) from alignment at Sc0000747:29121..31342+ >transcript:BL84064_cuf0 ID=transcript:BL84064_cuf0|Name=transcript:BL84064_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=327bp|location=Sequence derived from alignment at Sc0000747:29121..31342+ (Branchiostoma lanceolatum)
ATGCTGAGATTTACAACTCCCACTGATCCAATGTTTCAGACTGTCCGGCA
CCTGCGCACATTTGATAGCTCTTGTGTATACACTGGCCCATTATCAACAA
CAAGGGCTAGTGGAAGTCCCTACCCAGCCAAGTGCCACCAGCTTGCCACA
GCAGTGGCACAAGCCCAGGGGCAAGAAGATAAAACCAGATGCGGTAACAT
CTATGGTACTGGCAAAGCCAACAAAAGTCAAAAGAAAGAGGAAACCAGTT
TTCCACAAACCAACATCACAAAGGTAACCCAGGTTCTGGGATGGGCGATT
GAAAATTCTGTTTTTCTGCAAGACTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000747 | genome | Sc0000747:29121..31342 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL84064_cuf0 |
| Biotype | protein_coding |
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