|
|
Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL83934_cuf0 >transcript:BL83934_cuf0-protein ID=transcript:BL83934_cuf0-protein|Name=transcript:BL83934_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=166bp
MAEGYSLKPPSALDVHSRNLSVTWKRWKEEMTLYLDLTVDDAVKKKKTFL
YVIGEDARKVYETLTIVNNDNAPIAEKDRTVEQVMTAFEAYCNPKKNETV
ERHKFFTRSQASGETFDEYLTELRTLAAECGFGAIKDSLIRDRILCGISD
GKVRERLLRESDLSLX Run BLAST on NCBI mRNA from alignment at xpSc0039712:30322..31296+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL83934_cuf0 ID=transcript:BL83934_cuf0|Name=transcript:BL83934_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=975bp|location=Sequence derived from alignment at xpSc0039712:30322..31296+ (Branchiostoma lanceolatum)
TAACAAGATGTAACATGTGTGCTAGTTTAGCAACATTAACATATAGACTA
ACACGCATGCCCAAGAGTAAGACCTCAAGAGACTACCTGGCAGACTAAGA
TAGCGTCTGTCCAGCTTAGGAATAAACCATCAGAAAGTGCATACTGGAGT
GGTGTTATTCATTGGAACCCTACCAAGAGGTAGAAGAACAGTCCACGACG
AGACAGGACGTGTTACATGGTGATCAGAAGCGGGACTCCAACCGGAATCG
TTGAAAAGATACGAGAAGTTTGGAGAGGCAGCCCACGAGGAGCAGCGTAA
GGTTTGACTAGCCCTTTGTTCTACAACTTCTAGCCACATTCCAAGCGTCT
AGGAATTGACAGCTTAGGGACTTCCTAACAAGACTCCTGCTTCAGCAAGG
ACAGGTCAAAGTTGGTGGATACAGAGATCCATCACTGTCTTGTAAGTGCC
TGATTAACCTGACAACTTGTAAACAACATGGCGGAGGGGTATAGTTTGAA
ACCTCCCAGTGCTTTAGACGTGCATTCAAGAAACTTGAGTGTGACATGGA
AGAGATGGAAGGAAGAGATGACTTTGTACTTGGACCTTACAGTAGATGAT
GCTGTTAAGAAGAAGAAGACTTTTCTGTACGTAATTGGAGAAGATGCGAG
GAAGGTTTACGAGACGCTGACAATCGTGAACAATGATAACGCTCCAATAG
CAGAAAAAGACAGAACAGTAGAACAGGTGATGACAGCCTTCGAAGCCTAC
TGTAACCCGAAGAAGAATGAGACTGTCGAGAGGCACAAATTCTTCACACG
ATCTCAAGCTAGTGGTGAGACGTTTGACGAGTATCTCACCGAGTTGAGAA
CCCTAGCGGCGGAATGCGGATTTGGTGCCATCAAGGACTCCCTGATTAGA
GACAGAATCCTGTGTGGAATCTCAGATGGGAAGGTCCGAGAGAGACTACT
GAGAGAGAGTGACCTCAGCCTCAAN Coding sequence (CDS) from alignment at xpSc0039712:30322..31296+ >transcript:BL83934_cuf0 ID=transcript:BL83934_cuf0|Name=transcript:BL83934_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=498bp|location=Sequence derived from alignment at xpSc0039712:30322..31296+ (Branchiostoma lanceolatum)
ATGGCGGAGGGGTATAGTTTGAAACCTCCCAGTGCTTTAGACGTGCATTC
AAGAAACTTGAGTGTGACATGGAAGAGATGGAAGGAAGAGATGACTTTGT
ACTTGGACCTTACAGTAGATGATGCTGTTAAGAAGAAGAAGACTTTTCTG
TACGTAATTGGAGAAGATGCGAGGAAGGTTTACGAGACGCTGACAATCGT
GAACAATGATAACGCTCCAATAGCAGAAAAAGACAGAACAGTAGAACAGG
TGATGACAGCCTTCGAAGCCTACTGTAACCCGAAGAAGAATGAGACTGTC
GAGAGGCACAAATTCTTCACACGATCTCAAGCTAGTGGTGAGACGTTTGA
CGAGTATCTCACCGAGTTGAGAACCCTAGCGGCGGAATGCGGATTTGGTG
CCATCAAGGACTCCCTGATTAGAGACAGAATCCTGTGTGGAATCTCAGAT
GGGAAGGTCCGAGAGAGACTACTGAGAGAGAGTGACCTCAGCCTCAAN
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| xpSc0039712 | genome | xpSc0039712:30322..31296 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL83934_cuf0 |
| Biotype | protein_coding |
|
