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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL83930_cuf0 >transcript:BL83930_cuf0-protein ID=transcript:BL83930_cuf0-protein|Name=transcript:BL83930_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=170bp
VGKKTAWKVWEAHDEFTTTFYNLHDSPQHISDETEASLESFTILLFDRTS
TCSSINSLRKELFIRKNRQMSALPPTKAALHLHIRRAALQGGHYWGRATT
PCRQLPSPAEWDWSCPEEWRPLRTNLPEAVDSCTELLKCKCRNLCSTCKC
ARAQLKCTVYCGCRGECNNV Run BLAST on NCBI mRNA from alignment at xpSc0039711:36300..37546- Legend: CDSpolypeptideexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL83930_cuf0 ID=transcript:BL83930_cuf0|Name=transcript:BL83930_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1247bp|location=Sequence derived from alignment at xpSc0039711:36300..37546- (Branchiostoma lanceolatum)
GTTGGGAAGAAGACTGCGTGGAAAGTTTGGGAAGCACATGATGAATTCAC
AACCACATTTTACAACCTCCACGATTCACCACAACACATCTCGGACGAAA
CAGAAGCCTCACTTGAATCCTTCACTATCTTACTGTTTGACCGCACATCA
ACATGCAGCTCAATCAACTCACTACGAAAAGAACTGTTCATCCGTAAGAA
CAGACAAATGTCTGCACTTCCACCCACAAAAGCCGCTTTACACCTGCACA
TCAGAAGAGCAGCACTACAAGGCGGCCATTACTGGGGTAGAGCGACCACC
CCGTGCCGCCAGTTGCCATCTCCTGCTGAGTGGGACTGGAGCTGCCCAGA
AGAGTGGAGACCGCTCCGGACAAACCTACCAGAAGCTGTGGACTCATGCA
CCGAGCTCCTGAAATGTAAATGCAGAAATTTGTGCTCCACTTGTAAATGT
GCAAGAGCACAGCTAAAATGCACCGTGTATTGCGGTTGCAGGGGGGAGTG
TAACAATGTGTAAATCATCCTGTATCCTGTACATATGTATTAGAAAACTT
TGAATGCCATAGTTGTATTAGCTTGTTAACATTGTTATTATATGCATTTT
TCTGTATATTGTATAAAACCTAGCTGTTAGAATATGATGATTAGGGATAT
AATGTAACTACATTAAGGATACTATTCATCTAGACTTGTAAATAATTAAC
AATTCAAGTGACTGACTTTTCGATAGATGACTTCATTTGTCAACAAGTAT
GCATGAGATTGACATCTAGTTACGGATACTATGTATCTAGATGAAGGATA
CTATGTATCTACATTATGGACATTAAGAATACTATGTATCAATTTATAAG
TAATAAAAAAGAGCCTCTCTTTTAAGAGTTTTTTTCCCCTTTCCACTTAC
TGTGTATGTGCACATGTATTGTAAAGAGCTCCCATTAAACAGCTGTACTT
TTTTCTTTGCACTTTGTACGTAATGATACAATGTATATTCCTATTTCATA
AAAGCCAAGAAAATGATTTTTTGTGGGAAATGTATGAAAAAGCCAATGTC
TTTAAATAGAAGTATGGAAATTCCAACAAGTATAGCGTAGTCAGTGAAAG
ATCCTAAACTGTAAGTGCATAGCGAATTCCAACATTGTTTGATAAAATAA
GACATGATTATCGTAGTAAAACACCGGAAAATCGACATTTTTGGTTTAAA
GTAGCAAAAAAGGTCTTTTTGATTTAAATGATGATGACTAAATCAAC Coding sequence (CDS) from alignment at xpSc0039711:36300..37546- >transcript:BL83930_cuf0 ID=transcript:BL83930_cuf0|Name=transcript:BL83930_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=513bp|location=Sequence derived from alignment at xpSc0039711:36300..37546- (Branchiostoma lanceolatum)
GTTGGGAAGAAGACTGCGTGGAAAGTTTGGGAAGCACATGATGAATTCAC
AACCACATTTTACAACCTCCACGATTCACCACAACACATCTCGGACGAAA
CAGAAGCCTCACTTGAATCCTTCACTATCTTACTGTTTGACCGCACATCA
ACATGCAGCTCAATCAACTCACTACGAAAAGAACTGTTCATCCGTAAGAA
CAGACAAATGTCTGCACTTCCACCCACAAAAGCCGCTTTACACCTGCACA
TCAGAAGAGCAGCACTACAAGGCGGCCATTACTGGGGTAGAGCGACCACC
CCGTGCCGCCAGTTGCCATCTCCTGCTGAGTGGGACTGGAGCTGCCCAGA
AGAGTGGAGACCGCTCCGGACAAACCTACCAGAAGCTGTGGACTCATGCA
CCGAGCTCCTGAAATGTAAATGCAGAAATTTGTGCTCCACTTGTAAATGT
GCAAGAGCACAGCTAAAATGCACCGTGTATTGCGGTTGCAGGGGGGAGTG
TAACAATGTGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| xpSc0039711 | genome | xpSc0039711:36300..37546 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL83930_cuf0 |
| Biotype | protein_coding |
|
