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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL83593_cuf1 >transcript:BL83593_cuf1-protein ID=transcript:BL83593_cuf1-protein|Name=transcript:BL83593_cuf1|organism=Branchiostoma lanceolatum|type=polypeptide|length=306bp
ENTSQNDDIPEIEANKLDKEGIDVHVEQEAFDDVKKTYENVTDEGAMPHH
TVEFTPISVPCSIITEESVEQQKDTSREVVEVDSETSQNGRDRKNTQDVA
EECNTIVPDEVKVTEIRDEVIENKVEQDSVKVEYSEDSAQENQEHTVVED
VAEKETVEAREESLMAESVTGRKDEEDKAKREESTEVSSLESQEPPVTST
TVEVVLNTSVEETPSEIRQTDKPSSVENIEDGDHQVKNSQGVVEEGQRSE
VTEERQNMREESSEIQGQGDSLENVTKEEKQNLLSQAKSAEELTADEIDE
LEDTYL Run BLAST on NCBI mRNA from alignment at Sc0000053:1050746..1053847- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL83593_cuf1 ID=transcript:BL83593_cuf1|Name=transcript:BL83593_cuf1|organism=Branchiostoma lanceolatum|type=mRNA|length=3102bp|location=Sequence derived from alignment at Sc0000053:1050746..1053847- (Branchiostoma lanceolatum)
AGAAAACACTTCTCAAAATGATGATATTCCTGAAATAGAAGCCAACAAAT
TAGACAAGGAAGGCATAGATGTGCATGTAGAGCAAGAGGCATTTGATGAT
GTTAAGAAAACTTATGAAAATGTCACAGATGAAGGAGCTATGCCTCATCA
TACAGTTGAATTTACACCGATTTCTGTACCTTGTAGCATAATCACTGAAG
AGAGTGTTGAACAACAGAAAGATACCTCTAGAGAAGTGGTTGAAGTTGAC
TCTGAGACATCACAAAATGGAAGGGATAGGAAAAACACACAGGATGTAGC
TGAGGAGTGTAATACAATTGTACCAGATGAGGTCAAGGTCACAGAGATTA
GGGATGAGGTCATAGAAAACAAGGTAGAACAGGATAGTGTCAAGGTCGAA
TATAGTGAAGACAGTGCACAGGAAAATCAGGAACATACAGTTGTTGAAGA
TGTGGCAGAGAAAGAAACTGTAGAAGCCAGGGAAGAAAGTCTGATGGCAG
AGTCAGTTACAGGGAGGAAAGATGAAGAGGATAAGGCTAAAAGGGAGGAA
AGCACAGAAGTTAGCAGTTTAGAGTCACAGGAACCTCCAGTAACAAGTAC
GACTGTCGAGGTAGTTTTAAACACTAGCGTAGAGGAAACGCCGTCAGAAA
TAAGACAGACAGACAAACCTTCCAGTGTAGAAAACATAGAGGATGGGGAT
CATCAGGTAAAGAACAGTCAAGGGGTTGTAGAAGAAGGTCAAAGGTCAGA
GGTTACAGAGGAAAGACAAAATATGAGAGAAGAAAGTTCTGAGATTCAGG
GACAGGGAGACTCCCTTGAAAATGTGACAAAAGAAGAAAAGCAGAATTTG
TTGAGTCAGGCAAAATCAGCGGAGGAATTGACAGCTGATGAAATAGATGA
ACTAGAGGACACTTATTTGTAAGTTGAATAAAAATAAATTTTTTACACAA
CAAAGATATAGAAATTCATTGATTCTTATTATTCCTCAAATCAAAGCAAT
GATACATATGCCTGATATGACATGGCAATTTGGTAGGATTTTACTGTTTT
AAAATTTACCATTTGTCTAAAAAGAAAGATATTTGATGCATTCAAAATGA
AGCCATATGAATTCCTGGGACATCAAGCAGTTTTCTGTACTAGACTGTGA
CAACCTTGTGGAAATGTGGATTAAACAAAGGCAGTTGAGATTAATGTTAT
CATGATAAGCAATACATTGCAATTGTAAATGCATGGAGAAGTTCCAAAGA
AAAGTATGTGTATTTTGGAAAAAGTGGTATATGAATAAAAAGATAAAAAT
GTTATGAAGGAACGCTGCACCATCACTTTACATGTAATTTTTTACCCCCA
AAAAGTTATCAAATTTTATAACTGACTCGATTGCGTCACAGGTTGAAATA
CTCAAACGCTGATATGTAGATATGCTGTAAAAAAAAAAGAAGTTACATTG
TGTGATTTTATATACAAATATATATGATATGACGTTACAGGGTAAAATTG
GTCCTAACGTAAGTACACAATTGGAATGGACAAATCCTCATTGTATCACA
GGTAACAGTTACTGTATTTTTTCATTACAGGGTTCTGTGTGTGAAAATGT
ACAATTATTCAAAATCTTGAAAAAGAAAGGCAACTTTTGCTTCGACAACA
TTTTTTCCAGTGTTAGTTCACTTTATTTAGCATGTGTTTCCTTCCCATCC
ATCTACAATGTTTCTACGCACATTGTTACCATGAACACAACTGTTGTTGT
TTACATGATGTATATACCATTATAAAGATTATGCAATGTATATACTGCTA
TGTATCAGTGCTGTTATATTAATGCAGTGTTGTCATTGATTTTTATGCCA
CAAAAATAGTACTAGTAAACAATATTACTAAACATAATGTGGAACAAATA
TAAGCCATTGTATTGCCAAATCCTGGAGAAATTGTTGACTTTGTGACACT
TTTTATTGTATACGTATTGTACATGTATGTAATTACAATCAGTATGTAAC
TAGTTAAAAGCACAGCAGGACAGGAATAAAAGAAATTACTCATAAAATAT
ATTAAGTATGGCATTGTAGACTGCATCTTCATCATCAGAAAGTTTCAGAT
TGAATAACAAAATACCAATACACATCGAAAGTGCAATTTACCAATGTATC
AACATTTTTGAAGAGAATTCTGTAGTTTTTCAGCAAATGTATGATCGACT
TGAAGTCATGATATTGGTTGCCTATGCCTGAGACTTTTGTATTGTGGTTA
TGATAGTTTTCCTTTTTTTAAATCTAGTTACAATGGCTGCATGTATTATT
CTCAAGTAAACAGGAATGCAATATTTCACGTATGACAATGTTAATGTAGG
TTTTGATAGTTTTTTTAGATCCATAGTTACAATGGCTGCATGTATTATTC
TCAAATGTAAACATGTATGCAATATTTCATGTATGACAATATAAATGTAT
CAGACTTAGTGCAACATAGTATTTCTCAGTACCTGACAATTTTAGCCATA
AACAAGCTTAAACTTTCAAAAGACATATTACATCAATAACAATGGATGAT
TTGAACAATGTTGAAGGTTCCTTACCTCTTTTTGTACAGCGGAAAACGTA
GACACCTGTACATGTGTGGAAATTCTTCCATAAGAGTGTCTTAGATTGGC
ACAAGAATACTTGTCAAATTGCTAAGGGCCGTGTGATGTAGATATTTTTA
TACAAACTATCTTTCTCACATTTAAGTGTATGTGTAATTCTATTGTGCAC
AGGTAAGAGAAATAAAGTGGAAATACAGACAGAATTGGTGAGTTTGCTCA
ACTTTGCTGTAATACATGTGGATGTCACTAAATCGTCTCTGAAGTCCTAC
AGTAATAACTGTATTTTCTCTGATATATGTGCATGTTGCCATATTCAAAT
CCTCATGTGCTGTCCTTTAATGAACAAGTTTCTAGTTGGTTTCACACAAC
GTCACATTCTTGAAAGTTCAGTTAGAAGTACATATATATTGGAGCTGTGC
ACTTACATGTATTAGCAATAATACATTACTTTTGAAGGTGGAATGTTCAA
TAACAGGAGAATGGTATACTAGGCATAAACATTGATGTTTATTGAATGAT
TC Coding sequence (CDS) from alignment at Sc0000053:1050746..1053847- >transcript:BL83593_cuf1 ID=transcript:BL83593_cuf1|Name=transcript:BL83593_cuf1|organism=Branchiostoma lanceolatum|type=CDS|length=921bp|location=Sequence derived from alignment at Sc0000053:1050746..1053847- (Branchiostoma lanceolatum)
GAAAACACTTCTCAAAATGATGATATTCCTGAAATAGAAGCCAACAAATT
AGACAAGGAAGGCATAGATGTGCATGTAGAGCAAGAGGCATTTGATGATG
TTAAGAAAACTTATGAAAATGTCACAGATGAAGGAGCTATGCCTCATCAT
ACAGTTGAATTTACACCGATTTCTGTACCTTGTAGCATAATCACTGAAGA
GAGTGTTGAACAACAGAAAGATACCTCTAGAGAAGTGGTTGAAGTTGACT
CTGAGACATCACAAAATGGAAGGGATAGGAAAAACACACAGGATGTAGCT
GAGGAGTGTAATACAATTGTACCAGATGAGGTCAAGGTCACAGAGATTAG
GGATGAGGTCATAGAAAACAAGGTAGAACAGGATAGTGTCAAGGTCGAAT
ATAGTGAAGACAGTGCACAGGAAAATCAGGAACATACAGTTGTTGAAGAT
GTGGCAGAGAAAGAAACTGTAGAAGCCAGGGAAGAAAGTCTGATGGCAGA
GTCAGTTACAGGGAGGAAAGATGAAGAGGATAAGGCTAAAAGGGAGGAAA
GCACAGAAGTTAGCAGTTTAGAGTCACAGGAACCTCCAGTAACAAGTACG
ACTGTCGAGGTAGTTTTAAACACTAGCGTAGAGGAAACGCCGTCAGAAAT
AAGACAGACAGACAAACCTTCCAGTGTAGAAAACATAGAGGATGGGGATC
ATCAGGTAAAGAACAGTCAAGGGGTTGTAGAAGAAGGTCAAAGGTCAGAG
GTTACAGAGGAAAGACAAAATATGAGAGAAGAAAGTTCTGAGATTCAGGG
ACAGGGAGACTCCCTTGAAAATGTGACAAAAGAAGAAAAGCAGAATTTGT
TGAGTCAGGCAAAATCAGCGGAGGAATTGACAGCTGATGAAATAGATGAA
CTAGAGGACACTTATTTGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000053 | genome | Sc0000053:1050746..1053847 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL83593_cuf1 |
| Biotype | protein_coding |
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