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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL83475_cuf0 >transcript:BL83475_cuf0-protein ID=transcript:BL83475_cuf0-protein|Name=transcript:BL83475_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=266bp
EMVFHPSKCSVVSMTRKTSPVEYPYSMSDSVLSRQDSYNDLGVHVQHNLS
WNSHVLKKISTCNSRLAMIKRSVGFNAPFTVKLNLYRSLVIPHLDYCSQV
WAPHTRLYQRKVEGVQRRATKYICNDYELNYKDRLTHTNLLPLCYRRELF
DILFLFKCFRNVYCTNISHVLNVSRPTRSLRSTDQFQLVPRPCKTESFSF
SYFSRIAVIWNNLPLDIRQHMYSNLTLQSVKKLLISYYRSRLSDTFSVDN
LCTWTTTCRCSSCIVT Run BLAST on NCBI mRNA from alignment at Sc0000080:524080..525074- Legend: CDSpolypeptideexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL83475_cuf0 ID=transcript:BL83475_cuf0|Name=transcript:BL83475_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=995bp|location=Sequence derived from alignment at Sc0000080:524080..525074- (Branchiostoma lanceolatum)
GAGATGGTATTTCATCCATCTAAGTGTTCAGTTGTTAGTATGACACGTAA
AACTTCACCTGTTGAATACCCTTATAGCATGTCAGATTCTGTACTCAGTC
GACAAGATAGTTATAATGACTTAGGAGTTCATGTACAACATAACTTATCC
TGGAATTCTCATGTACTTAAGAAGATATCAACATGTAACTCAAGACTTGC
AATGATCAAGAGATCAGTAGGCTTTAATGCCCCATTTACTGTTAAACTCA
ATTTGTATCGATCACTGGTGATACCACATTTAGACTACTGTTCTCAGGTA
TGGGCACCGCATACAAGATTGTATCAGCGCAAAGTAGAAGGTGTTCAAAG
ACGTGCTACCAAGTACATCTGTAATGATTACGAACTTAACTATAAGGACA
GATTAACCCATACCAACCTTCTACCATTGTGTTACAGACGAGAACTTTTT
GATATCTTATTTCTTTTCAAATGTTTCCGCAACGTGTACTGTACCAACAT
TTCTCATGTCCTCAATGTATCCAGACCTACTAGATCACTTCGCTCTACAG
ACCAATTCCAACTTGTACCACGGCCATGTAAAACTGAATCATTCTCATTC
TCTTACTTTAGTCGTATTGCCGTCATCTGGAACAATTTACCACTAGACAT
TCGCCAACATATGTACTCAAACCTCACTCTACAGTCCGTTAAAAAACTCT
TGATTTCATATTATAGATCCCGATTAAGTGACACATTTTCTGTTGATAAC
TTATGTACTTGGACGACCACTTGTCGTTGCTCATCTTGCATAGTGACATA
GCTTAACCGTTTACCCTGTTTTCCTTATCATTTGACCTTATTACTCTCAT
TTTTTTAATGTACTTCTTTCAGTATTTGATGTCTTTCATTTATTGTTTTT
ATCTCAACTTTGTAAATTTTCTGGGGGAGTCGGCCTCGTAGAGGAACTAG
ATTCCTGTTGCCGGCTCCCCTCAGATTGTACGCAATCTGTGAATT Coding sequence (CDS) from alignment at Sc0000080:524080..525074- >transcript:BL83475_cuf0 ID=transcript:BL83475_cuf0|Name=transcript:BL83475_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=801bp|location=Sequence derived from alignment at Sc0000080:524080..525074- (Branchiostoma lanceolatum)
GAGATGGTATTTCATCCATCTAAGTGTTCAGTTGTTAGTATGACACGTAA
AACTTCACCTGTTGAATACCCTTATAGCATGTCAGATTCTGTACTCAGTC
GACAAGATAGTTATAATGACTTAGGAGTTCATGTACAACATAACTTATCC
TGGAATTCTCATGTACTTAAGAAGATATCAACATGTAACTCAAGACTTGC
AATGATCAAGAGATCAGTAGGCTTTAATGCCCCATTTACTGTTAAACTCA
ATTTGTATCGATCACTGGTGATACCACATTTAGACTACTGTTCTCAGGTA
TGGGCACCGCATACAAGATTGTATCAGCGCAAAGTAGAAGGTGTTCAAAG
ACGTGCTACCAAGTACATCTGTAATGATTACGAACTTAACTATAAGGACA
GATTAACCCATACCAACCTTCTACCATTGTGTTACAGACGAGAACTTTTT
GATATCTTATTTCTTTTCAAATGTTTCCGCAACGTGTACTGTACCAACAT
TTCTCATGTCCTCAATGTATCCAGACCTACTAGATCACTTCGCTCTACAG
ACCAATTCCAACTTGTACCACGGCCATGTAAAACTGAATCATTCTCATTC
TCTTACTTTAGTCGTATTGCCGTCATCTGGAACAATTTACCACTAGACAT
TCGCCAACATATGTACTCAAACCTCACTCTACAGTCCGTTAAAAAACTCT
TGATTTCATATTATAGATCCCGATTAAGTGACACATTTTCTGTTGATAAC
TTATGTACTTGGACGACCACTTGTCGTTGCTCATCTTGCATAGTGACATA
G
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000080 | genome | Sc0000080:524080..525074 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL83475_cuf0 |
| Biotype | protein_coding |
|
