|
|
Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL83407_cuf0 >transcript:BL83407_cuf0-protein ID=transcript:BL83407_cuf0-protein|Name=transcript:BL83407_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=167bp
LMSASTITWGFIMTHPFLLLILPSLIFSPLSSSPLSHLFPSLIFSPLSSS
PLSHLLPSLIFSPLSSSPLSHLLPSLIFSPLSSSPLSHLLPSLIFSPLSS
SPLSHLLPSLIFSPLSSSPLSHLLPSLIFSPLSSHSHSILIPVLIPFLNP
FFPNVPILIPVSTLTKA Run BLAST on NCBI mRNA from alignment at Sc0000002:2719647..2721306+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL83407_cuf0 ID=transcript:BL83407_cuf0|Name=transcript:BL83407_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1660bp|location=Sequence derived from alignment at Sc0000002:2719647..2721306+ (Branchiostoma lanceolatum)
CTCTAATGTCTGCCAGCACGATAACTTGGGGATTCATTATGACACACCCA
TTCCTTTTACTTATCCTCCCCTCTCTCATCTTCTCCCCTCTCTCATCTTC
TCCCCTCTCTCATCTTTTCCCCTCTCTCATCTTCTCCCCTCTCTCATCTT
CTCCCCTCTCTCATCTTCTCCCCTCTCTCATCTTCTCCCCTCTCTCATCT
TCTCCCCTCTCTCATCTTCTCCCCTCTCTCATCTTCTCCCCTCTCTCATC
TTCTCCCCTCTCTCATCTTCTCCCCTCTCTCATCTTCTCCCCTCTCTCAT
CTTCTCCCCTCTCTCATCTTCTCCCCTCTCTCATCTTCTCCCCTCTCTCA
TCTTCTCCCCTCTCTCATCTTCTCCCCTCTCTCATCTTCTCCCCACTCTC
ATCCCACTCTCATTCCATTCTTATCCCTGTTCTTATCCCCTTCCTTAACC
CTTTCTTCCCCAATGTTCCCATTCTCATCCCCGTGTCTACTCTGACCAAA
GCATAGCACAGCTGGAAACTTAATACATTGAATGTTATATCCCTTACCGT
CCTATAGACCTATTCACATACTTGACCTTACATTTCAGATGCCTTTCAAC
GTTTCCCCATAACGTAAAATGACCGGTTTACGTCCGATTTATTTAAAACG
TTATTTCATCCTAAAACCTCGCGGACAGAGTCAAATGTTTAACCCATGGG
TAGAAATATCAGCTCTTCTAACAAGAAAATGCATGGTCTGTAAGTTTTTC
TCCGCCAGTTTAACGCCGTGCGAGCATGTATTTATACTGGGGTATATGGT
GTAGAATTGTGCTAAGCNCTACTCTGACCAAAGCATAGCACAGCTGGAAA
CTTAATACATTGAATGTTATATCCCTTACCGTCCTATAGACCTATTCACA
TACTTGACCTTACATTTCAGATGCCTTTCAACGTTTCCCCATAACGTAAA
ATGACCGGTTTACGTCAGATTTATTTACAACGTTATTTCATCCTAAAACC
TCGCGGACAGAGTCAAATGTTTAACCCATGGGTAGAAATATCAGCTCTTC
TAACAAGAAAATGCATGGTCTGTAAGTTTTTCTCCGCCAGTTTAACGCCG
TGCGAGCATGTATTTATACTGGGGTATATGGTGTAGAATTGTGCTAAGCT
TACCCTTTATCGTCCACCTCAGTATTTTCCCTTCTAGCGCTATGCTTGAA
GAACACAGGCCGGGAAAAAAATCACAGTATCTGTCGAAAGTAGTCTACAG
ACAAATGACAGTACAGTCACTACGTTTGTCCCTCCGCTTGCCCGACGCGA
TGGAAGAAACATTTTTGTATTGTGAGTTTCCCCGACATCAGCAGCACGTG
GCGTTCACGTGATAAACGAATGGCCATGCTGTTCTGCCGTGCAAAAATGT
ATCATCTGAGCGGGGGTCGCTAGGTTGTATCAAACCTTCCTAAAACTGGC
AAGAGTTTCAAACCTCGAATCACCATGGATAGTGTGCATATCAAAGAAAG
GTTTAACGTCAGCTACTTTTACAAGATACTAGCTATCGTGTGAGTTAGAA
AACATGATGAAATACGCGGTGTCGAATTACATATGAAGAGTTTATTCTGT
TATGTCGCTGGACGTAAACACTTTTAAATGTTTTGTATAAAAGAGAGAGA
GATGGCTGAA Coding sequence (CDS) from alignment at Sc0000002:2719647..2721306+ >transcript:BL83407_cuf0 ID=transcript:BL83407_cuf0|Name=transcript:BL83407_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=504bp|location=Sequence derived from alignment at Sc0000002:2719647..2721306+ (Branchiostoma lanceolatum)
CTAATGTCTGCCAGCACGATAACTTGGGGATTCATTATGACACACCCATT
CCTTTTACTTATCCTCCCCTCTCTCATCTTCTCCCCTCTCTCATCTTCTC
CCCTCTCTCATCTTTTCCCCTCTCTCATCTTCTCCCCTCTCTCATCTTCT
CCCCTCTCTCATCTTCTCCCCTCTCTCATCTTCTCCCCTCTCTCATCTTC
TCCCCTCTCTCATCTTCTCCCCTCTCTCATCTTCTCCCCTCTCTCATCTT
CTCCCCTCTCTCATCTTCTCCCCTCTCTCATCTTCTCCCCTCTCTCATCT
TCTCCCCTCTCTCATCTTCTCCCCTCTCTCATCTTCTCCCCTCTCTCATC
TTCTCCCCTCTCTCATCTTCTCCCCTCTCTCATCTTCTCCCCACTCTCAT
CCCACTCTCATTCCATTCTTATCCCTGTTCTTATCCCCTTCCTTAACCCT
TTCTTCCCCAATGTTCCCATTCTCATCCCCGTGTCTACTCTGACCAAAGC
ATAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000002 | genome | Sc0000002:2719647..2721306 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL83407_cuf0 |
| Biotype | protein_coding |
|
