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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL83315_cuf0 >transcript:BL83315_cuf0-protein ID=transcript:BL83315_cuf0-protein|Name=transcript:BL83315_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=429bp
MFSFSMSGQQELICGLSRVVTIAVLPRLNMEELIFELNRRIQNLDKENSI
KDRLVSILRDVMLEEYSQLKASSPDERTIPIQEQETVTMQEGVPTSTDSM
PSTHDTPTFSRQLQDTYNSMSTCAEKPLEGEETPMTSCQPTPNHDDLHIK
MEWRVFENDHIKQVSQPSNPDHPENYADNTEAGFITSEHEQRDRVKSEER
PLAPCQPIPDQDCDKMASLLPDRDSEIDSDGKHYLCDVCGFKTSYADSLS
KHRQRHKGEKPFMCGECGYRAYNKRRLADHMRKHTGEKPFKCELCDFETA
YQANLSYHLKRHTGEKPFKCNQCSYTASHKRRLVEHMKTHTGEKPYNCQI
CDYRTYRKFDVVKHMMSRHGGVKPYKCEDCDYRTAYKTALTSHRRRHTGE
RPYSCQECDYKASEKGSLVKHMRNMHQLK Run BLAST on NCBI mRNA from alignment at Sc0000003:5930487..5932322- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL83315_cuf0 ID=transcript:BL83315_cuf0|Name=transcript:BL83315_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1836bp|location=Sequence derived from alignment at Sc0000003:5930487..5932322- (Branchiostoma lanceolatum)
CAATGTTCATCCCGGCAATGCCGCCCAGTTAGTGCCTTCATTGCCTTGGG
TATTTTTATGCACCGAATCTTCTATCTACATGTACATCTTTATGATCTTA
GACAAACCCCCTCATGAGGCATTATAAGCGTCTATTTCATAACATGTATT
TCATCCATCAATGTTTTCCTTCAGCATGTCCGGACAACAGGAGTTAATCT
GTGGCCTCTCGCGCGTGGTTACCATAGCAGTCCTCCCCAGACTGAACATG
GAGGAGCTGATATTTGAGCTCAACAGGAGGATTCAAAACCTGGACAAAGA
GAACAGCATCAAGGACAGGTTGGTCAGTATCCTTAGGGACGTGATGTTGG
AGGAATACAGTCAGCTGAAAGCCAGTTCTCCAGATGAAAGGACCATACCC
ATACAAGAACAGGAGACAGTAACCATGCAAGAAGGCGTTCCGACTTCGAC
TGATTCAATGCCTTCAACTCATGACACTCCTACTTTTAGTAGGCAGTTGC
AAGATACATATAATTCAATGAGTACTTGCGCTGAGAAGCCTTTGGAAGGA
GAGGAAACGCCTATGACTTCTTGTCAACCGACTCCAAACCACGATGACTT
ACATATAAAGATGGAATGGCGTGTGTTCGAGAATGATCATATCAAGCAAG
TTTCTCAACCGTCCAACCCGGATCATCCCGAAAACTATGCTGACAACACA
GAGGCTGGTTTCATCACTAGTGAACATGAACAACGTGACAGAGTGAAAAG
TGAGGAAAGACCTTTGGCTCCTTGTCAACCAATTCCAGACCAGGATTGTG
ACAAAATGGCGTCCCTCCTTCCTGACCGTGACTCTGAAATCGATTCAGAC
GGCAAGCATTATTTGTGTGACGTGTGCGGCTTCAAAACATCGTACGCAGA
CAGTCTCTCCAAGCATAGGCAACGTCACAAAGGGGAAAAACCTTTCATGT
GCGGCGAATGTGGTTACAGGGCATACAATAAGCGTCGGCTTGCCGATCAC
ATGAGGAAACACACCGGTGAGAAACCGTTCAAGTGTGAACTATGCGACTT
CGAGACGGCATACCAAGCCAACCTTAGCTATCATTTGAAACGCCACACCG
GTGAGAAGCCGTTCAAATGTAACCAATGCAGTTACACGGCGTCACATAAA
AGAAGGCTAGTCGAACATATGAAAACGCACACAGGCGAGAAACCTTACAA
CTGTCAAATTTGTGACTACCGGACTTACCGAAAGTTCGACGTTGTGAAAC
ACATGATGAGCAGGCACGGTGGTGTGAAACCCTACAAATGTGAGGACTGT
GACTACAGGACTGCTTACAAAACCGCTCTTACCAGTCACAGGAGACGTCA
CACCGGTGAGAGACCTTACAGTTGTCAAGAGTGTGACTACAAGGCAAGTG
AAAAGGGCAGCCTTGTCAAGCATATGAGAAACATGCACCAATTAAAATAG
TGCCAGTTACTAGCTGGAGATGAAACCTTGTAAATATTTCTTCCAGCAAT
GTTAACTATAGATGAGAAACTCATTTTACAATTGCCCAAGATTCAAGAGT
ACTTTGATACTAAGAAAGGTCGTTGTAATCTCTTGCATTTCGAGTTCACT
TCCGATACTAAGCACAAAGTTTGAGTCTGTGTTTGTACTCTGTAATTATA
ATGATAATAACCCTTATTGTACATTCAATAATATAGAGAAGTAAAGGTAC
AACGATGTTAACAATACTCTAGACGGTGTGCATTCTTGTGTTAGTTTTCT
AGTTATATTACATACTTTTTATCTGTGTGTCTCTATACTTGCCGACAGCA
ATAAAGTTGAACATTGGCAAAGATTTTGTATTTCTG Coding sequence (CDS) from alignment at Sc0000003:5930487..5932322- >transcript:BL83315_cuf0 ID=transcript:BL83315_cuf0|Name=transcript:BL83315_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1290bp|location=Sequence derived from alignment at Sc0000003:5930487..5932322- (Branchiostoma lanceolatum)
ATGTTTTCCTTCAGCATGTCCGGACAACAGGAGTTAATCTGTGGCCTCTC
GCGCGTGGTTACCATAGCAGTCCTCCCCAGACTGAACATGGAGGAGCTGA
TATTTGAGCTCAACAGGAGGATTCAAAACCTGGACAAAGAGAACAGCATC
AAGGACAGGTTGGTCAGTATCCTTAGGGACGTGATGTTGGAGGAATACAG
TCAGCTGAAAGCCAGTTCTCCAGATGAAAGGACCATACCCATACAAGAAC
AGGAGACAGTAACCATGCAAGAAGGCGTTCCGACTTCGACTGATTCAATG
CCTTCAACTCATGACACTCCTACTTTTAGTAGGCAGTTGCAAGATACATA
TAATTCAATGAGTACTTGCGCTGAGAAGCCTTTGGAAGGAGAGGAAACGC
CTATGACTTCTTGTCAACCGACTCCAAACCACGATGACTTACATATAAAG
ATGGAATGGCGTGTGTTCGAGAATGATCATATCAAGCAAGTTTCTCAACC
GTCCAACCCGGATCATCCCGAAAACTATGCTGACAACACAGAGGCTGGTT
TCATCACTAGTGAACATGAACAACGTGACAGAGTGAAAAGTGAGGAAAGA
CCTTTGGCTCCTTGTCAACCAATTCCAGACCAGGATTGTGACAAAATGGC
GTCCCTCCTTCCTGACCGTGACTCTGAAATCGATTCAGACGGCAAGCATT
ATTTGTGTGACGTGTGCGGCTTCAAAACATCGTACGCAGACAGTCTCTCC
AAGCATAGGCAACGTCACAAAGGGGAAAAACCTTTCATGTGCGGCGAATG
TGGTTACAGGGCATACAATAAGCGTCGGCTTGCCGATCACATGAGGAAAC
ACACCGGTGAGAAACCGTTCAAGTGTGAACTATGCGACTTCGAGACGGCA
TACCAAGCCAACCTTAGCTATCATTTGAAACGCCACACCGGTGAGAAGCC
GTTCAAATGTAACCAATGCAGTTACACGGCGTCACATAAAAGAAGGCTAG
TCGAACATATGAAAACGCACACAGGCGAGAAACCTTACAACTGTCAAATT
TGTGACTACCGGACTTACCGAAAGTTCGACGTTGTGAAACACATGATGAG
CAGGCACGGTGGTGTGAAACCCTACAAATGTGAGGACTGTGACTACAGGA
CTGCTTACAAAACCGCTCTTACCAGTCACAGGAGACGTCACACCGGTGAG
AGACCTTACAGTTGTCAAGAGTGTGACTACAAGGCAAGTGAAAAGGGCAG
CCTTGTCAAGCATATGAGAAACATGCACCAATTAAAATAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000003 | genome | Sc0000003:5930487..5932322 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL83315_cuf0 |
| Biotype | protein_coding |
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