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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL83292_cuf0 >transcript:BL83292_cuf0-protein ID=transcript:BL83292_cuf0-protein|Name=transcript:BL83292_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=226bp
MEQRHKALLLVKRLEITSDLRFRDIRRHLVNNGILNGTDLDEIEDRDTRT
DKVKALLDILPTRGPKAFTVFRDALKGRYPHLARILHNEEPRVFVIHAGE
DKDSFVRPLVTKLQQKGLAERDIFFDDVSIKPGDVIRDKILSTLSSQALK
LVVIVVSTSFLNKPYWPKLEFETCLINNKHVFPIWVDDNSDSFKAFSELV
GKYSPTLKQTSARRVQRDDVTAELPN Run BLAST on NCBI mRNA from alignment at xfSc0000020:15428..16799- Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL83292_cuf0 ID=transcript:BL83292_cuf0|Name=transcript:BL83292_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1372bp|location=Sequence derived from alignment at xfSc0000020:15428..16799- (Branchiostoma lanceolatum)
CTCCGAACTGGGTCTGATACATTTTAAAGCCCTGTTGCTTTGTTCAGTAC
AACAGTAGCAGCCAACAAACAGTTGCAACACAAAAGAACATAAACGTACG
ACGGGGCTTTGAGCAAACTCTTCACACCATCATTCAGATAGAAGATATAA
CACGAGCTACAGAGACAATATCAAGGATATTCAGTAACTTCATGGAGCAG
AGACACAAGGCCCTCCTTCTCGTCAAACGATTGGAGATAACGAGTGATCT
ACGGTTTAGAGACATTCGACGGCATCTTGTAAACAATGGGATCTTGAATG
GTACTGATCTTGACGAGATAGAAGATAGAGATACACGTACAGATAAAGTC
AAGGCCTTGCTGGACATTCTTCCTACCAGAGGACCAAAGGCATTCACGGT
GTTTCGGGATGCCCTGAAGGGCCGCTACCCGCATCTGGCACGGATCTTGC
ATAATGAAGGTAATCATGAGCCACATATAGACAGCGGAATAAAACGTATG
CAGTGAATGGTTTTAGACTGAATTGAGCACGTTTTGCATAGTTCCCTTCC
CCCATCTCTAATACGAGGGATACCCCCATACCGAATCCCAGGTTATTTGG
CTATCATATATTGATACAGAAACCCATGATGTGCATTCTTGGACGAAAAT
AGAAACATTCCTAAAGTAATGATTATAAATTGGTATGATAGAAAGACAAA
CTGTCATACTCCCATATAGTACTTTTAAGTAATTAGTATTCTGGACCCGT
ATATAGTGCTTTTCAGTGACAGGTGTTCTCATAGCCACAATATCTATATC
GCAATTTTCTCTTTAAGGTATTCGTATAACCCTTATATAGTGCTTTTCAC
GAAAAGGTATTCTCACAACACATATAATATACCGCAGTGTTTCATTTTCC
CGATGTAACGTTACATGACAATCTATTCATGTTTGTAGCGCCAAGTGATC
GTGTTTGTCTAGAACCACGTGTGTTCGTCATCCACGCAGGAGAAGACAAA
GACTCATTTGTCCGCCCGCTTGTTACCAAGTTGCAGCAAAAGGGGTTGGC
CGAAAGGGACATTTTCTTCGATGACGTTTCCATCAAACCTGGTGACGTCA
TTAGGGACAAAATACTTTCAACGCTCTCAAGTCAAGCTTTGAAACTTGTT
GTCATTGTCGTCAGCACATCATTTCTAAACAAGCCCTACTGGCCTAAGCT
GGAGTTTGAAACATGTCTGATAAACAACAAACATGTATTCCCCATTTGGG
TTGATGACAACAGTGACAGCTTTAAGGCATTCAGTGAACTAGTTGGAAAG
TACTCCCCCACATTGAAACAGACCAGTGCGAGACGTGTACAGAGAGATGA
TGTTACTGCTGAGCTACCAAAC Coding sequence (CDS) from alignment at xfSc0000020:15428..16799- >transcript:BL83292_cuf0 ID=transcript:BL83292_cuf0|Name=transcript:BL83292_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1356bp|location=Sequence derived from alignment at xfSc0000020:15428..16799- (Branchiostoma lanceolatum)
ATGGAGCAGAGACACAAGGCCCTCCTTCTCGTCAAACGATTGGAGATAAC
GAGTGATCTACGGTTTAGAGACATTCGACGGCATCTTGTAAACAATGGGA
TCTTGAATGGTACTGATCTTGACGAGATAGAAGATAGAGATACACGTACA
GATAAAGTCAAGGCCTTGCTGGACATTCTTCCTACCAGAGGACCAAAGGC
ATTCACGGTGTTTCGGGATGCCCTGAAGGGCCGCTACCCGCATCTGGCAC
GGATCTTGCATAATGAAGAACCACGTGTGTTCGTCATCCACGCAGGAGAA
GACAAAGACTCATTTGTCCGCCCGCTTGTTACCAAGTTGCAGCAAAAGGG
GTTGGCCGAAAGGGACATTTTCTTCGATGACGTTTCCATCAAACCTGGTG
ACGTCATTAGGGACAAAATACTTTCAACGCTCTCAAGTCAAGCTTTGAAA
CTTGTTGTCATTGTCGTCAGCACATCATTTCTAAACAAGCCCTACTGGCC
TAAGCTGGAGTTTGAAACATGTCTGATAAACAACAAACATGTATTCCCCA
TTTGGGTTGATGACAACAGTGACAGCTTTAAGGCATTCAGTGAACTAGTT
GGAAAGTACTCCCCCACATTGAAACAGACCAGTGCGAGACGTGTACAGAG
AGATGATGTTACTGCTGAGCTACCAAACATGGAGCAGAGACACAAGGCCC
TCCTTCTCGTCAAACGATTGGAGATAACGAGTGATCTACGGTTTAGAGAC
ATTCGACGGCATCTTGTAAACAATGGGATCTTGAATGGTACTGATCTTGA
CGAGATAGAAGATAGAGATACACGTACAGATAAAGTCAAGGCCTTGCTGG
ACATTCTTCCTACCAGAGGACCAAAGGCATTCACGGTGTTTCGGGATGCC
CTGAAGGGCCGCTACCCGCATCTGGCACGGATCTTGCATAATGAAGAACC
ACGTGTGTTCGTCATCCACGCAGGAGAAGACAAAGACTCATTTGTCCGCC
CGCTTGTTACCAAGTTGCAGCAAAAGGGGTTGGCCGAAAGGGACATTTTC
TTCGATGACGTTTCCATCAAACCTGGTGACGTCATTAGGGACAAAATACT
TTCAACGCTCTCAAGTCAAGCTTTGAAACTTGTTGTCATTGTCGTCAGCA
CATCATTTCTAAACAAGCCCTACTGGCCTAAGCTGGAGTTTGAAACATGT
CTGATAAACAACAAACATGTATTCCCCATTTGGGTTGATGACAACAGTGA
CAGCTTTAAGGCATTCAGTGAACTAGTTGGAAAGTACTCCCCCACATTGA
AACAGACCAGTGCGAGACGTGTACAGAGAGATGATGTTACTGCTGAGCTA
CCAAAC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| xfSc0000020 | genome | xfSc0000020:15428..16799 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL83292_cuf0 |
| Biotype | protein_coding |
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