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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL83131_cuf0 >transcript:BL83131_cuf0-protein ID=transcript:BL83131_cuf0-protein|Name=transcript:BL83131_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=616bp
SNSCLRNGYYPKEWSRCHIVPIHKSGDTALPDNYRGISIISCLGKLFSSI
LNTRLVNYAEHYSLFKPQQAGFRKKFRTTDNIFVLSTLVSRYLSRNKRLY
ACFVDFSKAFDSVWREGLLLKLNKLGIGGKFLLTIKDMYSKTTNCVKTSQ
GLTETFVTNCGVRQGCNLSPTLFNLFISDLADAFDDGICNPPTLHNKKVS
CLLYADDLVLFSETQRGLQTSLDKLENYCKSWHLNVNLKKTKVIVFTKGG
RLPKDCYFLFSNNVIDVVTNYCYLGIVVNSAGTFKANNKYLHSKGSRALF
GINQSLHQADPTISVKNKVFDACVKPILLYGSEIWGSFKSPKSSPIEAIH
LKFCKQTLKVPKSACNLAVMAELGRYPLRLEASLNAIKHYIRIRQNVPAD
SLSADALLCQLDLDTSGAKCWASGVRKTLEECGFAYVWHSPQNLFLNSSQ
IIPSIHQRLKDMYFQHFTTEMRNNNKLRTYRLFKNTYHEEKYLNITNSRH
KTAITKLRISSHKLNIEKGRHNRIPLQERICQFCNLDRIEDESHFVVECT
LYNDERNILYTYIQDKFPSFKYINSTEKFLFIMKLNKPCITSSISTYIYN
CLMKREEVEPVNSRQV Run BLAST on NCBI mRNA from alignment at Sc0000029:2572196..2574180+ Legend: CDSpolypeptideexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL83131_cuf0 ID=transcript:BL83131_cuf0|Name=transcript:BL83131_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1985bp|location=Sequence derived from alignment at Sc0000029:2572196..2574180+ (Branchiostoma lanceolatum)
TCTAACTCCTGTCTACGAAATGGTTACTATCCTAAAGAATGGTCACGTTG
TCATATTGTTCCTATTCATAAATCTGGAGACACCGCGCTCCCAGACAACT
ATCGGGGAATATCAATAATTAGTTGTCTGGGAAAGCTATTCTCATCTATC
TTAAATACACGTCTTGTTAACTATGCAGAACATTACAGCCTTTTCAAACC
CCAACAGGCCGGTTTTAGAAAGAAATTTAGAACAACTGATAACATTTTTG
TATTGTCTACTTTAGTAAGCAGATATCTAAGCAGGAATAAACGACTCTAT
GCATGTTTTGTAGATTTTAGCAAGGCCTTTGACTCGGTTTGGAGAGAGGG
TCTCTTGCTGAAATTGAATAAACTTGGAATAGGGGGTAAATTTTTGCTTA
CTATTAAAGACATGTATTCCAAAACAACAAATTGTGTAAAAACTAGCCAA
GGTCTAACTGAAACTTTTGTAACTAACTGTGGGGTTCGTCAAGGCTGTAA
CTTGAGTCCAACATTGTTTAATCTATTCATAAGTGATTTAGCAGATGCGT
TTGATGATGGTATTTGTAACCCTCCTACTTTACATAATAAGAAAGTGTCT
TGTTTATTATATGCAGATGACCTAGTGCTTTTCTCTGAAACCCAACGGGG
ACTGCAAACATCTTTAGACAAATTAGAAAACTATTGTAAATCATGGCATT
TGAATGTTAATCTCAAGAAAACGAAAGTAATTGTCTTTACAAAGGGAGGC
CGTCTGCCTAAAGACTGTTATTTCTTGTTTAGTAATAATGTTATAGATGT
TGTGACAAACTATTGTTATTTGGGTATTGTTGTAAACTCAGCTGGCACGT
TCAAGGCAAACAACAAATACTTACACAGCAAAGGCTCAAGAGCCCTCTTT
GGAATCAATCAATCTCTTCACCAAGCCGATCCTACAATTTCCGTTAAAAA
CAAAGTCTTTGATGCATGTGTAAAACCGATATTGTTGTATGGGTCTGAAA
TCTGGGGATCTTTCAAAAGTCCAAAATCATCCCCAATTGAAGCCATTCAC
TTAAAATTCTGCAAACAAACATTAAAAGTCCCCAAGTCTGCATGTAATCT
AGCTGTGATGGCGGAATTGGGGAGATACCCCCTTAGATTAGAAGCTTCCC
TGAACGCTATAAAACACTATATTAGAATACGCCAGAACGTGCCAGCTGAC
AGCCTTTCAGCAGACGCCCTTTTGTGTCAACTTGATTTAGATACATCAGG
GGCTAAATGCTGGGCTTCGGGAGTCCGCAAGACACTTGAGGAATGTGGTT
TTGCCTATGTATGGCATTCACCCCAGAATCTTTTTTTAAATTCTTCTCAG
ATTATTCCATCCATTCACCAACGTCTGAAAGATATGTATTTCCAACATTT
TACAACAGAAATGCGAAACAATAACAAATTACGAACGTACAGATTATTTA
AGAATACTTACCACGAGGAGAAATATCTAAACATTACAAACTCTCGACAC
AAAACAGCAATCACAAAACTTCGGATAAGTTCACACAAACTGAACATTGA
AAAGGGCAGACACAACCGCATTCCTCTGCAAGAAAGAATTTGTCAATTTT
GTAATTTAGATAGAATTGAGGACGAAAGCCATTTTGTTGTGGAATGTACA
TTATATAACGATGAGAGAAATATCCTTTATACTTATATACAAGATAAGTT
CCCTAGTTTTAAATATATAAACAGCACTGAAAAATTCCTATTTATAATGA
AACTGAACAAACCATGTATTACGAGTTCCATATCTACATACATCTACAAT
TGCCTTATGAAGCGAGAAGAAGTCGAACCTGTAAACAGTAGACAAGTATA
GATTAGTCCTATTAGACACAGTAAGATATCTCATTATATTTCGTTATATT
ATCACCACTGTATGTAGTCCTTTGCTTATCACCATGACCTGTACTTAGCT
TGTTTAAGCATAAATGTACAATAAAGGTCTTTCAT Coding sequence (CDS) from alignment at Sc0000029:2572196..2574180+ >transcript:BL83131_cuf0 ID=transcript:BL83131_cuf0|Name=transcript:BL83131_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1851bp|location=Sequence derived from alignment at Sc0000029:2572196..2574180+ (Branchiostoma lanceolatum)
TCTAACTCCTGTCTACGAAATGGTTACTATCCTAAAGAATGGTCACGTTG
TCATATTGTTCCTATTCATAAATCTGGAGACACCGCGCTCCCAGACAACT
ATCGGGGAATATCAATAATTAGTTGTCTGGGAAAGCTATTCTCATCTATC
TTAAATACACGTCTTGTTAACTATGCAGAACATTACAGCCTTTTCAAACC
CCAACAGGCCGGTTTTAGAAAGAAATTTAGAACAACTGATAACATTTTTG
TATTGTCTACTTTAGTAAGCAGATATCTAAGCAGGAATAAACGACTCTAT
GCATGTTTTGTAGATTTTAGCAAGGCCTTTGACTCGGTTTGGAGAGAGGG
TCTCTTGCTGAAATTGAATAAACTTGGAATAGGGGGTAAATTTTTGCTTA
CTATTAAAGACATGTATTCCAAAACAACAAATTGTGTAAAAACTAGCCAA
GGTCTAACTGAAACTTTTGTAACTAACTGTGGGGTTCGTCAAGGCTGTAA
CTTGAGTCCAACATTGTTTAATCTATTCATAAGTGATTTAGCAGATGCGT
TTGATGATGGTATTTGTAACCCTCCTACTTTACATAATAAGAAAGTGTCT
TGTTTATTATATGCAGATGACCTAGTGCTTTTCTCTGAAACCCAACGGGG
ACTGCAAACATCTTTAGACAAATTAGAAAACTATTGTAAATCATGGCATT
TGAATGTTAATCTCAAGAAAACGAAAGTAATTGTCTTTACAAAGGGAGGC
CGTCTGCCTAAAGACTGTTATTTCTTGTTTAGTAATAATGTTATAGATGT
TGTGACAAACTATTGTTATTTGGGTATTGTTGTAAACTCAGCTGGCACGT
TCAAGGCAAACAACAAATACTTACACAGCAAAGGCTCAAGAGCCCTCTTT
GGAATCAATCAATCTCTTCACCAAGCCGATCCTACAATTTCCGTTAAAAA
CAAAGTCTTTGATGCATGTGTAAAACCGATATTGTTGTATGGGTCTGAAA
TCTGGGGATCTTTCAAAAGTCCAAAATCATCCCCAATTGAAGCCATTCAC
TTAAAATTCTGCAAACAAACATTAAAAGTCCCCAAGTCTGCATGTAATCT
AGCTGTGATGGCGGAATTGGGGAGATACCCCCTTAGATTAGAAGCTTCCC
TGAACGCTATAAAACACTATATTAGAATACGCCAGAACGTGCCAGCTGAC
AGCCTTTCAGCAGACGCCCTTTTGTGTCAACTTGATTTAGATACATCAGG
GGCTAAATGCTGGGCTTCGGGAGTCCGCAAGACACTTGAGGAATGTGGTT
TTGCCTATGTATGGCATTCACCCCAGAATCTTTTTTTAAATTCTTCTCAG
ATTATTCCATCCATTCACCAACGTCTGAAAGATATGTATTTCCAACATTT
TACAACAGAAATGCGAAACAATAACAAATTACGAACGTACAGATTATTTA
AGAATACTTACCACGAGGAGAAATATCTAAACATTACAAACTCTCGACAC
AAAACAGCAATCACAAAACTTCGGATAAGTTCACACAAACTGAACATTGA
AAAGGGCAGACACAACCGCATTCCTCTGCAAGAAAGAATTTGTCAATTTT
GTAATTTAGATAGAATTGAGGACGAAAGCCATTTTGTTGTGGAATGTACA
TTATATAACGATGAGAGAAATATCCTTTATACTTATATACAAGATAAGTT
CCCTAGTTTTAAATATATAAACAGCACTGAAAAATTCCTATTTATAATGA
AACTGAACAAACCATGTATTACGAGTTCCATATCTACATACATCTACAAT
TGCCTTATGAAGCGAGAAGAAGTCGAACCTGTAAACAGTAGACAAGTATA
G
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000029 | genome | Sc0000029:2572196..2574180 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL83131_cuf0 |
| Biotype | protein_coding |
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