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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL83105_cuf0 >transcript:BL83105_cuf0-protein ID=transcript:BL83105_cuf0-protein|Name=transcript:BL83105_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=541bp
PTLSSFLEHSIQSVPSQTQLTTAPSLSPSPSFVIDPTITIMPTPSFVSPG
MSSNIFVPTQSYKMETVSMATPAMSSVFSSVGLDFEGSGDDGVSSITLPT
VVMTTPMTSFSLDFPGSGDSTVSLMPSVTMATIAMTTSTTSQSLDFEGSG
DSSTTVFPTASFSLSTPPATAMPNTTKPAVTQAAETTSHAATEIITTDYN
TVMGTTEGVNTVTVTTESDLTTEGTTEMATVLEQTTFTETADNTTGISNV
TSTTFPTSTETTDVTALTTVTEVLTTIISDENDTTTVINTTDSTFTAEPT
LTMATSTETTDVTALTTVTEVLTTIISDENDTTTMISTTDGTTEPTPMMA
TSTETTDITGLTTVTEILTTIISDENETTTVVSTTEGENITAEPTSTMAT
STETTDVTALTTVTEVLTTIISDENDTTTEPTSTLATSIETETETVNATT
MPPSQTTGFTIILDTESITTVKPTVEMTTTGEMMTTTVQPAVTVPANMVL
NVVLNVAVTITEVTDVILSALLNLLKEWFLLGLSKQQSNAM Run BLAST on NCBI mRNA from alignment at Sc0000288:18347..19971+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL83105_cuf0 ID=transcript:BL83105_cuf0|Name=transcript:BL83105_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1625bp|location=Sequence derived from alignment at Sc0000288:18347..19971+ (Branchiostoma lanceolatum)
CTCCAACACTGTCCTCCTTCTTGGAACATAGTATACAATCAGTACCTTCC
CAAACACAGTTGACCACAGCCCCATCCCTGTCTCCCTCTCCAAGTTTTGT
CATAGACCCCACCATCACAATAATGCCGACACCCAGTTTTGTGTCACCAG
GCATGTCATCCAACATTTTTGTCCCAACTCAAAGCTACAAAATGGAAACT
GTCTCCATGGCAACACCAGCAATGTCTTCAGTCTTCTCAAGTGTAGGATT
GGATTTTGAAGGTTCTGGAGACGATGGAGTGTCGTCTATCACCTTGCCAA
CTGTTGTCATGACAACCCCTATGACGTCCTTCAGCTTAGACTTCCCTGGG
TCTGGAGATAGCACAGTGTCATTGATGCCATCTGTGACCATGGCAACTAT
TGCCATGACAACATCAACAACTTCACAGAGTTTGGACTTTGAGGGTTCTG
GTGATAGTTCAACTACAGTGTTCCCCACAGCATCCTTCAGTCTGTCTACT
CCACCTGCCACAGCCATGCCTAACACCACCAAGCCTGCGGTTACACAGGC
AGCAGAAACAACGTCACATGCAGCAACCGAGATAATCACAACTGATTACA
ATACTGTCATGGGCACTACGGAGGGGGTGAACACAGTCACAGTGACGACT
GAGTCTGATCTAACCACAGAGGGAACAACAGAAATGGCAACAGTTCTCGA
ACAAACCACATTTACAGAGACTGCAGACAACACAACAGGAATTTCCAATG
TAACCAGTACAACATTCCCAACCTCCACTGAAACAACTGATGTAACAGCG
CTGACGACAGTGACAGAGGTTTTAACAACCATAATAAGTGATGAGAACGA
CACTACAACAGTGATCAATACAACAGACAGCACATTCACCGCAGAACCTA
CTTTAACAATGGCAACCTCCACTGAAACAACTGATGTAACAGCGCTGACA
ACAGTGACAGAAGTTTTAACCACTATAATAAGTGATGAGAATGACACAAC
AACAATGATCAGTACAACAGACGGCACAACTGAACCAACGCCAATGATGG
CAACCTCCACTGAAACAACAGACATAACAGGGCTGACGACAGTAACAGAG
ATCTTAACAACCATAATAAGTGATGAGAACGAGACTACAACAGTAGTCAG
TACAACAGAGGGGGAAAACATCACAGCAGAACCTACTTCAACCATGGCAA
CCTCCACTGAAACAACCGATGTAACAGCACTGACTACAGTAACAGAAGTT
TTAACAACTATAATAAGTGATGAAAACGATACTACAACTGAACCTACTTC
AACACTGGCAACCTCCATTGAGACAGAAACTGAGACTGTCAACGCTACCA
CGATGCCTCCATCACAGACTACTGGTTTTACTATCATACTTGACACAGAA
AGTATCACCACTGTTAAACCTACAGTAGAAATGACGACTACTGGAGAAAT
GATGACCACAACAGTGCAGCCAGCTGTGACAGTTCCAGCCAACATGGTGT
TGAATGTGGTTCTAAATGTGGCAGTGACCATTACCGAAGTGACCGATGTA
ATTCTGTCTGCTTTGCTGAACCTGCTCAAGGAATGGTTTCTCCTGGGGCT
GTCCAAACAGCAGTCCAATGCAATG Coding sequence (CDS) from alignment at Sc0000288:18347..19971+ >transcript:BL83105_cuf0 ID=transcript:BL83105_cuf0|Name=transcript:BL83105_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1623bp|location=Sequence derived from alignment at Sc0000288:18347..19971+ (Branchiostoma lanceolatum)
CCAACACTGTCCTCCTTCTTGGAACATAGTATACAATCAGTACCTTCCCA
AACACAGTTGACCACAGCCCCATCCCTGTCTCCCTCTCCAAGTTTTGTCA
TAGACCCCACCATCACAATAATGCCGACACCCAGTTTTGTGTCACCAGGC
ATGTCATCCAACATTTTTGTCCCAACTCAAAGCTACAAAATGGAAACTGT
CTCCATGGCAACACCAGCAATGTCTTCAGTCTTCTCAAGTGTAGGATTGG
ATTTTGAAGGTTCTGGAGACGATGGAGTGTCGTCTATCACCTTGCCAACT
GTTGTCATGACAACCCCTATGACGTCCTTCAGCTTAGACTTCCCTGGGTC
TGGAGATAGCACAGTGTCATTGATGCCATCTGTGACCATGGCAACTATTG
CCATGACAACATCAACAACTTCACAGAGTTTGGACTTTGAGGGTTCTGGT
GATAGTTCAACTACAGTGTTCCCCACAGCATCCTTCAGTCTGTCTACTCC
ACCTGCCACAGCCATGCCTAACACCACCAAGCCTGCGGTTACACAGGCAG
CAGAAACAACGTCACATGCAGCAACCGAGATAATCACAACTGATTACAAT
ACTGTCATGGGCACTACGGAGGGGGTGAACACAGTCACAGTGACGACTGA
GTCTGATCTAACCACAGAGGGAACAACAGAAATGGCAACAGTTCTCGAAC
AAACCACATTTACAGAGACTGCAGACAACACAACAGGAATTTCCAATGTA
ACCAGTACAACATTCCCAACCTCCACTGAAACAACTGATGTAACAGCGCT
GACGACAGTGACAGAGGTTTTAACAACCATAATAAGTGATGAGAACGACA
CTACAACAGTGATCAATACAACAGACAGCACATTCACCGCAGAACCTACT
TTAACAATGGCAACCTCCACTGAAACAACTGATGTAACAGCGCTGACAAC
AGTGACAGAAGTTTTAACCACTATAATAAGTGATGAGAATGACACAACAA
CAATGATCAGTACAACAGACGGCACAACTGAACCAACGCCAATGATGGCA
ACCTCCACTGAAACAACAGACATAACAGGGCTGACGACAGTAACAGAGAT
CTTAACAACCATAATAAGTGATGAGAACGAGACTACAACAGTAGTCAGTA
CAACAGAGGGGGAAAACATCACAGCAGAACCTACTTCAACCATGGCAACC
TCCACTGAAACAACCGATGTAACAGCACTGACTACAGTAACAGAAGTTTT
AACAACTATAATAAGTGATGAAAACGATACTACAACTGAACCTACTTCAA
CACTGGCAACCTCCATTGAGACAGAAACTGAGACTGTCAACGCTACCACG
ATGCCTCCATCACAGACTACTGGTTTTACTATCATACTTGACACAGAAAG
TATCACCACTGTTAAACCTACAGTAGAAATGACGACTACTGGAGAAATGA
TGACCACAACAGTGCAGCCAGCTGTGACAGTTCCAGCCAACATGGTGTTG
AATGTGGTTCTAAATGTGGCAGTGACCATTACCGAAGTGACCGATGTAAT
TCTGTCTGCTTTGCTGAACCTGCTCAAGGAATGGTTTCTCCTGGGGCTGT
CCAAACAGCAGTCCAATGCAATG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000288 | genome | Sc0000288:18347..19971 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL83105_cuf0 |
| Biotype | protein_coding |
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