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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL83102_cuf0 >transcript:BL83102_cuf0-protein ID=transcript:BL83102_cuf0-protein|Name=transcript:BL83102_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=106bp
TNHRPVVSQERDMAAQAGTGNDMSFLPLVHEIIRGMDMESPDVNQKITEL
KTKFQKCRTMVEEMPGIDCSEEEQKQQIEQLRQQVTTKTDLLKKYKNLCA
FELPRS Run BLAST on NCBI mRNA from alignment at Sc0000287:250766..252044- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL83102_cuf0 ID=transcript:BL83102_cuf0|Name=transcript:BL83102_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1279bp|location=Sequence derived from alignment at Sc0000287:250766..252044- (Branchiostoma lanceolatum)
AACAAATCATAGGCCAGTCGTATCACAGGAAAGAGACATGGCGGCGCAAG
CAGGAACGGGAAATGATATGTCCTTTCTTCCGTTGGTTCACGAGATAATT
CGAGGGTTAGTACAACGTTTAAGAGAGTTTTTCATCAGTCGATACTATGT
ATGACATCACAAATACTTGTTTAACCCCGATGGTTGGGAATAAAACCGTG
TATGGTGCCTCTCTTACAAACTATTTTCTTTTTCCTTTGTCCAGGATGGA
TATGGAATCACCAGACGTCAATCAAAAGATTACAGAACTGAAAACAAAAT
TCCAGAAATGTCGGACAATGGTGGAAGAGATGCCAGGTACTATTGCATGC
TTGAATTATTCTATATTCCTTTAACCTTTTATCATAAAGCCCTGACATCC
GAAATACATTTATGATTTATCATAAAACCTTGTGTTTTCATGGGAAAATT
TAGGACGTTGTAAAAGCTTACCAGTTTGACTTTAAGGACAAGTTGAGTAG
CTACTAGTACTAAGATGCAAGAAAACAGTGTATCACATTATGTAAATGTA
CAATTAAGTAAGATATTAGTGGTGTTAGATCTATGTACATAACTACTAGT
ACATATGTACATGTGACCCACTGTACTTGACTAAATTCTTGATGGACATT
GCATGCTCATGCTTTCTCTCCCGTCACACCATAACTGATGACTAGGGGTG
GATACCGGTTCGCTGGACCTGACTCGTACCTTTATAACATCCAAGAACCA
AGTCCAAAAAAACTGAAAGCATAAAACCTGATTCAAAAAAAAAACTGAGC
AAAGTACAAATGTATTTTCTATTTTGTTTGATAAAAAGGGTTTTGAGTCT
CCCCTCTTACAAAAAAGGCATTTAAAATAAGTGAAACATTCAAATATAAA
ACACTGGTTTATCTTGAAAGTCATCTGACCAAGAAACTTTTCTAGTTGTG
CATGTCAGTATTAATTCTCTATGCTTAGTATTGGTCTAATAAAACAAAAC
ATCAACTGGACAGGATCAGGTCCAGGTTCAGGTCCGGACCTGAACCTAAA
TCTCTGGACCTTAACTTGGACTTGGACCTTATTAAGCCAAACCGGTATCC
ACCCCTACTGATGACCATTATGTACTTGTTTTATCACAGGTATTGACTGC
AGTGAGGAGGAACAGAAACAACAGATAGAACAGCTCAGACAACAGGTCAC
CACAAAAACAGACTTACTCAAGAAGTACAAGAACTTGTGTGCATTTGAGC
TGCCAAGATCATGACAACTGAACTGAATG Coding sequence (CDS) from alignment at Sc0000287:250766..252044- >transcript:BL83102_cuf0 ID=transcript:BL83102_cuf0|Name=transcript:BL83102_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=963bp|location=Sequence derived from alignment at Sc0000287:250766..252044- (Branchiostoma lanceolatum)
ACAAATCATAGGCCAGTCGTATCACAGGAAAGAGACATGGCGGCGCAAGC
AGGAACGGGAAATGATATGTCCTTTCTTCCGTTGGTTCACGAGATAATTC
GAGGGATGGATATGGAATCACCAGACGTCAATCAAAAGATTACAGAACTG
AAAACAAAATTCCAGAAATGTCGGACAATGGTGGAAGAGATGCCAGGTAT
TGACTGCAGTGAGGAGGAACAGAAACAACAGATAGAACAGCTCAGACAAC
AGGTCACCACAAAAACAGACTTACTCAAGAAGTACAAGAACTTGTGTGCA
TTTGAGCTGCCAAGATCATGAACAAATCATAGGCCAGTCGTATCACAGGA
AAGAGACATGGCGGCGCAAGCAGGAACGGGAAATGATATGTCCTTTCTTC
CGTTGGTTCACGAGATAATTCGAGGGATGGATATGGAATCACCAGACGTC
AATCAAAAGATTACAGAACTGAAAACAAAATTCCAGAAATGTCGGACAAT
GGTGGAAGAGATGCCAGGTATTGACTGCAGTGAGGAGGAACAGAAACAAC
AGATAGAACAGCTCAGACAACAGGTCACCACAAAAACAGACTTACTCAAG
AAGTACAAGAACTTGTGTGCATTTGAGCTGCCAAGATCATGAACAAATCA
TAGGCCAGTCGTATCACAGGAAAGAGACATGGCGGCGCAAGCAGGAACGG
GAAATGATATGTCCTTTCTTCCGTTGGTTCACGAGATAATTCGAGGGATG
GATATGGAATCACCAGACGTCAATCAAAAGATTACAGAACTGAAAACAAA
ATTCCAGAAATGTCGGACAATGGTGGAAGAGATGCCAGGTATTGACTGCA
GTGAGGAGGAACAGAAACAACAGATAGAACAGCTCAGACAACAGGTCACC
ACAAAAACAGACTTACTCAAGAAGTACAAGAACTTGTGTGCATTTGAGCT
GCCAAGATCATGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000287 | genome | Sc0000287:250766..252044 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL83102_cuf0 |
| Biotype | protein_coding |
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