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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL82939_cuf1 >transcript:BL82939_cuf1-protein ID=transcript:BL82939_cuf1-protein|Name=transcript:BL82939_cuf1|organism=Branchiostoma lanceolatum|type=polypeptide|length=351bp
MADCSKESEKPQNAETQTEELQYVFSSVPGNQELKNAETQTEELQLGGQS
THVPNKDFFKSDEKVRYYTGLPSYEGLMIVFDHVAPFVTCTSQSLDSFQE
CMLVLMKLRQNMPFLYLAYWFDVSPSTVSQIFDTWIVALDIRLSCFVFWP
NREVLLKTMPMCFQHTFGQKVTAIIDCLEVSIDKPANLSAREQTFSSHKQ
RHTLKVLIGITPLGTMSFVSKAWGGCASNMFLAETSGFLDKLLPGDTVLV
GGKNCDSNGLEQGEFVMGAFKKGEAQLELTDVEGFRGIATVRTHVEKLIG
LLSRKYKFLEGTVPIDHLVCDDSQVPPIDRIIRICSALVNLGPPVESSGS
N Run BLAST on NCBI mRNA from alignment at Sc0000062:758373..760695+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL82939_cuf1 ID=transcript:BL82939_cuf1|Name=transcript:BL82939_cuf1|organism=Branchiostoma lanceolatum|type=mRNA|length=2323bp|location=Sequence derived from alignment at Sc0000062:758373..760695+ (Branchiostoma lanceolatum)
TTTTGTTTCTAGTTCGGTCAAGGACATTATATGTAATGGTTCGGTGAAGG
TTGAAGCCGTGTGGGATATAAATACACAAATTATGTTGACTGGGTTCCCT
TGATAGAAATATTAGTGAAGAAGAGGTGAAAATGTTGTTGTTTCTGTTAT
GCTCGGCTAAAGCACACAAGAAAAGGAAAGAGTCTGCCAGCTCACCTAAC
AACAGAAGAGAACAAATGGACTGAATATAGCACATGAGAGAGAAAAGAAT
ACAACTAGTAGTACATTGTAGTAGAAGCACATGGAAATGTGAGGTGGCAG
ACTCCTTTCTTATGTGTTTTTTATACATTCATATTTACATATATAAAGTA
ACACTTGAAAAAATTATGCTTGATAGGGCAATGTGGAGTAAAAATACTAT
AAGTATGTGCTTCTTGTTTGGTTCCAGCTGATTCAGGTGAAGCAACAAAG
GCAGAAGGAGGGCAGCTGAAAGACCTGAAGAACGCAGAAGAAGAACATCG
CTGGTCAACAGCAAGAGCCTGCAGGAAAACGACGCTGCACCGTGTGCAAA
AGATCAAATTTTAGGTGTGGGAAATTATGGCTGACTGTTCTAAAGAAAGT
GAAAAGCCGCAGAATGCTGAAACACAGACAGAGGAGCTGCAGTATGTGTT
TAGCAGCGTGCCAGGTAACCAGGAGTTGAAGAATGCTGAAACACAGACAG
AGGAGTTGCAGCTTGGTGGGCAAAGCACTCATGTCCCGAACAAAGACTTC
TTTAAGTCAGATGAGAAAGTTAGATATTATACCGGTCTGCCTTCTTATGA
AGGCCTTATGATTGTTTTTGACCATGTTGCGCCATTTGTTACATGCACAA
GTCAGAGTCTGGATAGTTTCCAGGAATGTATGCTAGTTCTTATGAAACTC
AGACAAAACATGCCATTTCTGTATCTGGCTTACTGGTTTGATGTCTCCCC
TTCCACTGTTTCACAGATATTCGACACATGGATAGTAGCATTGGACATCA
GACTGTCTTGTTTTGTTTTCTGGCCAAACAGAGAGGTTTTGTTGAAGACT
ATGCCGATGTGCTTTCAGCACACATTTGGTCAGAAAGTGACTGCCATCAT
TGACTGTTTGGAAGTGTCCATTGACAAACCTGCAAATCTCTCGGCCCGTG
AACAAACATTCTCGTCACACAAGCAACGTCATACCCTCAAAGTTCTAATT
GGTATTACTCCTCTGGGGACAATGTCTTTTGTGTCCAAGGCTTGGGGTGG
ATGTGCCTCAAACATGTTCCTGGCAGAGACCTCTGGTTTCTTGGACAAGC
TGCTACCAGGGGACACAGTTCTTGTAGGGGGTAAGAATTGTGATAGCAAT
GGGCTGGAACAAGGAGAGTTTGTAATGGGTGCATTCAAAAAGGGGGAGGC
ACAGCTAGAGCTGACTGATGTGGAAGGGTTCAGGGGTATTGCCACTGTAA
GAACACATGTTGAGAAACTTATCGGCCTTTTGAGCAGGAAGTACAAGTTC
TTAGAAGGAACTGTTCCCATAGATCACTTAGTCTGTGATGATTCCCAAGT
ACCGCCTATCGACCGAATCATCAGAATATGCTCAGCGCTTGTGAATCTCG
GTCCTCCAGTTGAATCATCAGGATCTAATTAGTTTCCTTCTCGTTTTGAG
CAGAAAGCAAGGTATGAAGTATGCTGTAACTATATTTGCATGTATAGTTT
GTATAGTGTGTAGTAATTGCATGCATAGGGTGTATAGCAGTCATAAGTGC
CTGCTTGGTGAAAGTTGGTAAGACAAACCTTGTTGCAAGATTAACATTCA
TATTAAGGCAATAAAAAGTTAATTTCAATGCTAGGTACTTAACAAACTAC
TGAAAGTTGAGTTTTGCCATCAAGAAAATACAGCAAACACAAATGTACTT
GTCCTCTTGTAGTTCTATTTTACTTTGACACTGAATATCTTGTACTATTA
GTACTAAATCAAAAAGTTCAAAGAGTACCACTGAATGTTTCACTATTGCA
TATTTACATGAGACTCTTTCAGTTTTTAGAACACACAACAGGAATTCTTT
AGATCAACTGTTTCAAAATAAATATTGAATTCCAAAAGTATCCTAAATTA
GCAGGTGTCTGATTCTTTGTTAATTTGTTTGAACACTACTAAGTGCTTAT
TGACTACGAATGATCAATTGACCAGTGCTGTGCCACTGATACAGATTCCT
GCTATCATCTCATCAACGCCCTTGACACCAGCCTGGACATCTTCACTCTA
AACGATAGATAGATGATGTAGAGGTTCCTCTTGTACCACTCTCTGCAAAA
AAACAAGAATGAAACATTATTTG Coding sequence (CDS) from alignment at Sc0000062:758373..760695+ >transcript:BL82939_cuf1 ID=transcript:BL82939_cuf1|Name=transcript:BL82939_cuf1|organism=Branchiostoma lanceolatum|type=CDS|length=1056bp|location=Sequence derived from alignment at Sc0000062:758373..760695+ (Branchiostoma lanceolatum)
ATGGCTGACTGTTCTAAAGAAAGTGAAAAGCCGCAGAATGCTGAAACACA
GACAGAGGAGCTGCAGTATGTGTTTAGCAGCGTGCCAGGTAACCAGGAGT
TGAAGAATGCTGAAACACAGACAGAGGAGTTGCAGCTTGGTGGGCAAAGC
ACTCATGTCCCGAACAAAGACTTCTTTAAGTCAGATGAGAAAGTTAGATA
TTATACCGGTCTGCCTTCTTATGAAGGCCTTATGATTGTTTTTGACCATG
TTGCGCCATTTGTTACATGCACAAGTCAGAGTCTGGATAGTTTCCAGGAA
TGTATGCTAGTTCTTATGAAACTCAGACAAAACATGCCATTTCTGTATCT
GGCTTACTGGTTTGATGTCTCCCCTTCCACTGTTTCACAGATATTCGACA
CATGGATAGTAGCATTGGACATCAGACTGTCTTGTTTTGTTTTCTGGCCA
AACAGAGAGGTTTTGTTGAAGACTATGCCGATGTGCTTTCAGCACACATT
TGGTCAGAAAGTGACTGCCATCATTGACTGTTTGGAAGTGTCCATTGACA
AACCTGCAAATCTCTCGGCCCGTGAACAAACATTCTCGTCACACAAGCAA
CGTCATACCCTCAAAGTTCTAATTGGTATTACTCCTCTGGGGACAATGTC
TTTTGTGTCCAAGGCTTGGGGTGGATGTGCCTCAAACATGTTCCTGGCAG
AGACCTCTGGTTTCTTGGACAAGCTGCTACCAGGGGACACAGTTCTTGTA
GGGGGTAAGAATTGTGATAGCAATGGGCTGGAACAAGGAGAGTTTGTAAT
GGGTGCATTCAAAAAGGGGGAGGCACAGCTAGAGCTGACTGATGTGGAAG
GGTTCAGGGGTATTGCCACTGTAAGAACACATGTTGAGAAACTTATCGGC
CTTTTGAGCAGGAAGTACAAGTTCTTAGAAGGAACTGTTCCCATAGATCA
CTTAGTCTGTGATGATTCCCAAGTACCGCCTATCGACCGAATCATCAGAA
TATGCTCAGCGCTTGTGAATCTCGGTCCTCCAGTTGAATCATCAGGATCT
AATTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000062 | genome | Sc0000062:758373..760695 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL82939_cuf1 |
| Biotype | protein_coding |
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