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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL82850_cuf0 >transcript:BL82850_cuf0-protein ID=transcript:BL82850_cuf0-protein|Name=transcript:BL82850_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=323bp
MYSSDTKPISCGVPQGSILGPLLFLIYINDLAFVSDEIYALLFADDTNLF
TSHSNLEFLVSKMNRELDKMNKWFQANKLSLNVKKTNFIIFAGKNKKYNK
ENVKIAINNTPIDQVTHTCFLGITIDEKLTWKKHVDLICQKIYKNIGIIR
KIVNLLSPKTFLILYYSLIYPYLAYCNIVWASTYATTLKPLLLLQKRFVR
LVSNVSYTFPSSSLFRNLKVMTIYDINKLQTSIFVHKIINDSSCVPNQFK
RLFHYNSEFHHYNTRQRNNLKQIQAKTQQRMFSMMYRCPQTWNSLHENLQ
NCKSLLRFKNMLKSSILNNQSFA Run BLAST on NCBI mRNA from alignment at Sc0000210:384441..386153- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL82850_cuf0 ID=transcript:BL82850_cuf0|Name=transcript:BL82850_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1713bp|location=Sequence derived from alignment at Sc0000210:384441..386153- (Branchiostoma lanceolatum)
GGTGAATCAGATAACCGAACAAAGGAAAATGAAAGTATGTAACAATGACA
GAAAGATAGAAAGAAAATAAGCAAGATAAAACAATAGACAGAGAAGAACG
TTTTTTTTTCGGAAATCAAACTGTCACGTAAAACCTAGTACANTTGAAAT
TAGTAGATAAAATAACCTCGGCCATAGAAAGGAATGAATTCACCATTGGA
GTTTTTCTGGATCTATCGAAGGCTTTCGATACGGTGGACCATGACATATT
GTTGGAGAAACTCAAATGCTACGGCTTCAATGGCTTAGTCTTCACCTGGT
TAAAGGATTATTTATCAAATAGAAAACAATATGTCACCAATAATATGTAC
TCTTCAGACACAAAACCAATTTCCTGTGGCGTCCCTCAAGGTTCTATTTT
GGGTCCCCTGTTATTTCTCATCTATATCAATGATTTAGCTTTTGTATCTG
ATGAAATATATGCACTATTATTTGCTGATGACACGAACTTATTTACTTCC
CACTCAAATCTTGAATTTTTAGTAAGCAAAATGAATCGCGAATTAGACAA
AATGAACAAATGGTTCCAAGCAAATAAATTATCATTAAACGTTAAGAAAA
CGAATTTCATTATTTTTGCGGGGAAAAATAAGAAATATAATAAAGAAAAT
GTCAAAATAGCGATCAATAACACACCTATTGATCAAGTAACTCACACTTG
TTTTTTAGGTATCACCATCGATGAAAAATTAACTTGGAAAAAACATGTAG
ACCTTATTTGCCAGAAAATTTATAAAAACATAGGTATTATCAGAAAAATT
GTAAATCTGCTATCTCCAAAAACATTCCTTATATTATACTACAGTCTTAT
ATATCCCTACCTAGCATATTGTAATATAGTATGGGCTAGTACATACGCCA
CAACATTAAAACCACTGCTTCTCTTACAAAAACGTTTTGTTCGTTTAGTT
TCAAATGTCTCATACACATTCCCCTCCTCATCGCTTTTTCGTAATCTAAA
AGTTATGACTATATATGATATTAACAAGCTTCAAACTTCTATTTTTGTCC
ATAAAATAATCAATGATAGTTCCTGTGTACCAAATCAATTCAAACGTCTC
TTTCACTACAACTCGGAATTTCATCATTATAATACAAGGCAACGAAACAA
CTTGAAACAGATACAAGCAAAAACACAGCAGCGAATGTTCTCCATGATGT
ACAGATGCCCGCAAACTTGGAATAGCTTACATGAAAACTTACAAAACTGC
AAATCACTACTGAGATTCAAAAACATGTTAAAAAGCTCCATTTTAAACAA
TCAATCCTTTGCTTAACCTTCTATTCTTTGGTTTTTCATTTATATCCTGC
ATGTCTGGGTGCATTTTTTGTGTTATTGACTTGTGTTGTTATATATGCTT
GTCGTTATTTGCATCGTTATTATTTATCGAATTGTTTCCTTTCTTACTTA
GTTGGTAATTTTTCTGTGTTCAGTTAGGTAATTGTTTCTTTAATATAATA
ATTCAGTTCTTGTTTTTTGTTATTGTTATTATTAGTTATTGATTTGTTAT
TTGTTACGATATTAAGTTGTCATTTTTTTTCTCTATATCTTAATTTATCA
TTGTAATTTATCCTGTTTGAAAAATGGGGATGGAATATTATAGACCACAT
TGGTCTCTACCTTCCCCGGCACTATGTGTATTGACCTGTCATATGTATGC
AAAATTCTTTTAC Coding sequence (CDS) from alignment at Sc0000210:384441..386153- >transcript:BL82850_cuf0 ID=transcript:BL82850_cuf0|Name=transcript:BL82850_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=972bp|location=Sequence derived from alignment at Sc0000210:384441..386153- (Branchiostoma lanceolatum)
ATGTACTCTTCAGACACAAAACCAATTTCCTGTGGCGTCCCTCAAGGTTC
TATTTTGGGTCCCCTGTTATTTCTCATCTATATCAATGATTTAGCTTTTG
TATCTGATGAAATATATGCACTATTATTTGCTGATGACACGAACTTATTT
ACTTCCCACTCAAATCTTGAATTTTTAGTAAGCAAAATGAATCGCGAATT
AGACAAAATGAACAAATGGTTCCAAGCAAATAAATTATCATTAAACGTTA
AGAAAACGAATTTCATTATTTTTGCGGGGAAAAATAAGAAATATAATAAA
GAAAATGTCAAAATAGCGATCAATAACACACCTATTGATCAAGTAACTCA
CACTTGTTTTTTAGGTATCACCATCGATGAAAAATTAACTTGGAAAAAAC
ATGTAGACCTTATTTGCCAGAAAATTTATAAAAACATAGGTATTATCAGA
AAAATTGTAAATCTGCTATCTCCAAAAACATTCCTTATATTATACTACAG
TCTTATATATCCCTACCTAGCATATTGTAATATAGTATGGGCTAGTACAT
ACGCCACAACATTAAAACCACTGCTTCTCTTACAAAAACGTTTTGTTCGT
TTAGTTTCAAATGTCTCATACACATTCCCCTCCTCATCGCTTTTTCGTAA
TCTAAAAGTTATGACTATATATGATATTAACAAGCTTCAAACTTCTATTT
TTGTCCATAAAATAATCAATGATAGTTCCTGTGTACCAAATCAATTCAAA
CGTCTCTTTCACTACAACTCGGAATTTCATCATTATAATACAAGGCAACG
AAACAACTTGAAACAGATACAAGCAAAAACACAGCAGCGAATGTTCTCCA
TGATGTACAGATGCCCGCAAACTTGGAATAGCTTACATGAAAACTTACAA
AACTGCAAATCACTACTGAGATTCAAAAACATGTTAAAAAGCTCCATTTT
AAACAATCAATCCTTTGCTTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000210 | genome | Sc0000210:384441..386153 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL82850_cuf0 |
| Biotype | protein_coding |
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