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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL82754_cuf0 >transcript:BL82754_cuf0-protein ID=transcript:BL82754_cuf0-protein|Name=transcript:BL82754_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=244bp
MQWGPSIDYDVVPAPTVDSFAKGNFQKKPFIIGTTLQENVFYVYQAYTKN
ITSKLKLDEIVATFVQEKAIPILEEYKPQTSQDYRAILSEIATDWIFTCP
TRKVARSAGSYRIDVWLYLYDHVWSFKHLWDEWKFCNGHVCHGEDIPFVF
QTPLLANLTFTTDEQHMADTIAYHYGNFAHTGDPNKPDHNINSSNNGKPK
VVNWPKYSTNGHFCGLNITTPESNLLDNYRHERCDVLDSLNVYH Run BLAST on NCBI mRNA from alignment at Sc0000046:1303328..1305149- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL82754_cuf0 ID=transcript:BL82754_cuf0|Name=transcript:BL82754_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1822bp|location=Sequence derived from alignment at Sc0000046:1303328..1305149- (Branchiostoma lanceolatum)
AGTACGTGGAGGAAGGAGTCATCTTCCTCGGCCTCCCTTTCGCGGTTCCA
TCCGTCGGCGAGCTACGTTGGAAGCCGCCTGCAGTATACAACACGTCCTG
GGCGCCCGCGGTCCGAGACGGTACTTTACCCGGACCCACCTGCCGCCAGC
CGAAATGCGGGCCTACTTACAACGACGTTCAACACATCTGCAATCGGGAT
GCAAACAGAACGCAGAGCGAAGACTGTCTGTACCTCAACATTTTCGCGCC
TGAATGTGCTCTGAATTCTACCGTGACACCGTTACCTGTTTTGTTTTGGA
TTCACGGTGGAAATTATCGTATCGGTACCGGGTCTGCGTTGGTGTACGAC
GGAAGATTTCTTCCTAACAAAACTGAGANTCGTTGTTACAATCAACTACA
GACTTGGTGCTTTCGGATTTCTCGTAACCGGTGAGGGAGAAGACGATGCA
AAAGGCAATTTTGGACTCCTAGATCAGTTAGAGGCGTTGGCATGGGTCCA
AGAAAACATCGGCAGCTTCGGAGGTGACAAAAACAAGGTCACCATATTCG
GGCAGAGCGCCGGGTCGGATTCAGTGGCCACTCACATGATTTCCAACAAG
ACAGCGGGCTTGTTCAAACAGGCCATCATGATGAGCGTACCGTTCTCCAT
TCCTCACAAATCTCGTCAGGAGGCGCTTCGTCTCGGTAAGTACTTTGCGC
AATAGCTGAACTGTTCACCCGGAGATGTGACTTGCCTTCGTGTCAAGGAA
CCAGCTGTTATACTTGACACTCAAAATAAGTTGAATTCTCACATTGTCGA
CCCGTTCAAGCCTATAGAGAGCTTCATGCAATGGGGGCCTTCTATAGACT
ACGACGTGGTGCCCGCTCCTACGGTAGATAGCTTCGCAAAAGGTAACTTT
CAGAAGAAGCCGTTTATCATAGGAACTACCTTGCAAGAAAATGTGTTTTA
TGTCTATCAAGCTTACACCAAGAACATAACCAGCAAACTCAAACTTGACG
AAATCGTTGCTACCTTTGTCCAAGAGAAGGCCATACCGATTCTAGAGGAG
TACAAACCTCAAACGTCACAAGACTATCGTGCGATTTTATCTGAGATCGC
CACGGACTGGATCTTTACGTGCCCGACTCGTAAAGTAGCACGAAGCGCTG
GTTCATACCGTATAGATGTTTGGTTGTATCTATACGACCATGTCTGGTCC
TTTAAGCATCTGTGGGACGAGTGGAAGTTTTGTAACGGCCACGTATGTCA
TGGGGAGGACATTCCGTTTGTATTTCAAACACCCCTCCTAGCGAATCTAA
CCTTTACCACCGACGAACAACACATGGCGGACACCATAGCGTACCACTAC
GGAAACTTCGCGCACACAGGCGACCCAAACAAACCCGACCACAACATCAA
CTCTTCAAACAACGGGAAACCAAAGGTCGTCAACTGGCCAAAGTACAGTA
CAAACGGACATTTCTGCGGACTAAATATCACAACTCCTGAAAGTAACTTG
CTGGACAACTACCGGCACGAGAGGTGTGACGTCCTTGACAGCCTCAATGT
GTATCATTAGCGAAAGATGTAAAATGCAACTAAAGTTAGTAACTTTGTAG
TTCAGTAGTTTGTGTGTCCATGAATACAGGTCGCACTGTACGGGGGGCCA
CTGTGTTACACGGACTCCTTTTCTAGTACGACACCTAACAGTAGATCCTT
TGATGTTCAATGCGTGGTCATTCTATATGTACATTAATAACACTCATTAA
TTTTCGCCTGATTTCGAAATAAATAAAAAAACAAGAAATTTCATTGCCCT
CCGACGGTGGTCAACATGCCAA Coding sequence (CDS) from alignment at Sc0000046:1303328..1305149- >transcript:BL82754_cuf0 ID=transcript:BL82754_cuf0|Name=transcript:BL82754_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=735bp|location=Sequence derived from alignment at Sc0000046:1303328..1305149- (Branchiostoma lanceolatum)
ATGCAATGGGGGCCTTCTATAGACTACGACGTGGTGCCCGCTCCTACGGT
AGATAGCTTCGCAAAAGGTAACTTTCAGAAGAAGCCGTTTATCATAGGAA
CTACCTTGCAAGAAAATGTGTTTTATGTCTATCAAGCTTACACCAAGAAC
ATAACCAGCAAACTCAAACTTGACGAAATCGTTGCTACCTTTGTCCAAGA
GAAGGCCATACCGATTCTAGAGGAGTACAAACCTCAAACGTCACAAGACT
ATCGTGCGATTTTATCTGAGATCGCCACGGACTGGATCTTTACGTGCCCG
ACTCGTAAAGTAGCACGAAGCGCTGGTTCATACCGTATAGATGTTTGGTT
GTATCTATACGACCATGTCTGGTCCTTTAAGCATCTGTGGGACGAGTGGA
AGTTTTGTAACGGCCACGTATGTCATGGGGAGGACATTCCGTTTGTATTT
CAAACACCCCTCCTAGCGAATCTAACCTTTACCACCGACGAACAACACAT
GGCGGACACCATAGCGTACCACTACGGAAACTTCGCGCACACAGGCGACC
CAAACAAACCCGACCACAACATCAACTCTTCAAACAACGGGAAACCAAAG
GTCGTCAACTGGCCAAAGTACAGTACAAACGGACATTTCTGCGGACTAAA
TATCACAACTCCTGAAAGTAACTTGCTGGACAACTACCGGCACGAGAGGT
GTGACGTCCTTGACAGCCTCAATGTGTATCATTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000046 | genome | Sc0000046:1303328..1305149 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL82754_cuf0 |
| Biotype | protein_coding |
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