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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL82731_cuf1 >transcript:BL82731_cuf1-protein ID=transcript:BL82731_cuf1-protein|Name=transcript:BL82731_cuf1|organism=Branchiostoma lanceolatum|type=polypeptide|length=193bp
MSSYLAMQQPCDAAAVLARRGDLDTLRVAAKIADAAGSEDQLSSVACRYA
YECQLQCKWLEGQDLLKNHKQLQVHRLNLCLHEVLVHGLYNIGCLSQGWA
QMMVPYSWGELGRPISLPEFSLHTGESDPLCPWSPYLVQGQSFLGYVVQV
WCQFSGLDLTTGNILQLCQQLAATLTTGSKPANTAKVQSCDRQ Run BLAST on NCBI mRNA from alignment at xfSc0001566:61..2784- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL82731_cuf1 ID=transcript:BL82731_cuf1|Name=transcript:BL82731_cuf1|organism=Branchiostoma lanceolatum|type=mRNA|length=2724bp|location=Sequence derived from alignment at xfSc0001566:61..2784- (Branchiostoma lanceolatum)
TTTCAACCGAAAACATAATCTTCCCGAGTACTAGTACTCAGCGAAGATAA
TAATGCACATTCATTGCATTTAGACAAAAGCTAAAACAAGAACTGTTTAG
TGATCTGATCGGCTCATGTACATGTATACATGTAGCTAACAGGTGACAAG
TTTGTATTAATCAGTATAGACATGACAAATAAAGTATGACACCATAATCA
ATTCATTAGATGTAAAGAGTGCTTGTGAAAGATGTTCTGTTCATCATACT
GACCACAGTGTGTTCTTTGCCCTGATGTCCAGCTACCTTGCTATGCAGCA
GCCGTGTGACGCTGCAGCTGTCCTGGCCAGAAGAGGGGATCTGGACACCC
TCAGAGTGGCTGCAAAAATAGCAGACGCAGCAGGAAGTGAAGATCAGCTG
TCTTCAGTGGCATGTAGATATGCATATGAGTGCCAACTTCAGTGTAAATG
GCTGGAAGGGCAAGATCTTCTCAAGAACCACAAACAACTACAGGTTCAAA
ACTCATAAAAAGACGTCAGTTGTTAAGTTTAGTTTGGGAATATGTGAACA
GAAACACACTCTCTGACAGTGTGTGTATCTCTCCACTGTTGAAGTTGTCT
AGCCTGTACATGTTGTGAGAGGAAAGTTTGTTCTGACATTTGTAGTGCCT
AGTGGCACAGAGGGTATATTTTTTACAGGGAGGGGTTGCTAGCCATTCCC
ATTTGATATGCTAAAGACACCTCCTTGAACACGGGACCCCCAATTTTATG
TCCCTTCAGAAAGATGTGTTCAGCCCCAACCCAGTTAGCAACTAATTGGA
ACCAGGAGCTCAATTGTGAGACTTCTACCAGTTGACCTATAGGGACATCT
CTGTAAGATTAATGTTTAAGTTCAGATAATGATACAACTTGATGAGACCT
GGTACAGTAATACTGTATTCCTTTTCTTGGTCCAGGTCCACAGATTAAAT
TTGTGCCTCCATGAAGTCCTTGTTCACGGTCTCTACAACATTGGCTGTTT
GTCACAAGGCTGGGCACAGATGATGGTTCCCTACAGCTGGGGAGAATTGG
GCAGACCAATTTCTTTACCAGGTTAGGTCTACATAATAGATAACCATGTA
TTACTGGGTTGACATATTACTGGGGTGACATAATTGATTTATGAACTTTC
ATAAACAAACGCTACTGAAAACATAACCTTGTTTGCAAACATAGATTAAC
ATGCCATTACAGATACACATACTCACAGACAGACACATAAACAAACGCTA
CTGAAAACATAACCTTGTTTGCAAAGGTAGTAAGAATTTATGACAACTGC
AAGTCCATCCTCGCAACCACACTCTCCTGAAACAATATCACCTGCCGGCC
AACCTTCTCATTGCTTCATACTCCTCACCAATAGAATCTTGTTTTCTCGC
CCATCTCCAGAGTTTTCTCTGCACACCGGTGAGTCGGACCCCTTGTGTCC
TTGGTCCCCCTACTTGGTCCAGGGTCAGTCATTCCTGGGCTACGTTGTAC
AAGTGTGGTGTCAGTTCTCTGGACTTGACCTGACTACTGGCAACATTCTC
CAGTTGTGTCAGCAGCTTGCAGCAACACTCACAACAGGGAGCAAACCTGC
CAATACTGCAAAGGTACAGTCATGTGACAGGCAGTAAATGTCATTGGCTT
GAGTGAGAGTTATGGTCGATATTTTTCTTTTTGTATTTAGGCCACACCAT
CTTAATTTCTTGGTTACATTTCCCAAGCGCGTCCTGAACGCTTCCGGAGA
TTTGATCAAATACATTGCCCGAAAACACATGTGTCTCGAGACTAGGCCAC
ACCAATTCAATTTCTTGGTTAAGGTATTTTTATTTCTTATTTTAGCACCA
AAAAAAATCATGAAAACAGAAGGCTGGGGTGAAAACCTGACCCTGTTCAC
TCCCTGATACTGTGTGCACCAAAGTAATAACATTCCTCTGAGATTCTGTT
TTCATGTTGTTTTTTCAATGTAGCATTTTTTTAATTCCGTTAACCAAGAA
AATAAATTGGTGTGGCCTTAACTATCCCCAGTGTTCTTGCAATTACTTAT
AAGCTTTGTTGCAGCATCTTTGCAGTTGGTTCCACTTTGAAATGTTGGGC
TTGAAAGTTGGTCGATAAGTACCGGTAACACTACTTCACCTAAATCCGCA
GGAAAATATATATCCAGGATTTTTGAAAACGGTGTATTTTGGAATATATG
CTAAGCTAGATACATCATCAGTGATACCGGCAGAAATGCAAACTTGACAT
ACTTAGGTACATGTAATATTTCAGAATGTTGCCTGAAAAGCTTTGATATG
GCCACACCTATGTTTTTCAAATCCACAGCAACTCCCATTCAGGAAATGTT
TACTTCAGTATATTACTTTGAAGCAATTGAGCAATTTTCCAGTATAGCAA
AATGGATTAAATGCCTTTATTCAGTTTTGTCTACCAATGTTTTTAGCTTC
AATTAGCGATCACGTTGTCGCATTGGTGTGTAATTTGGCAAATCGTCTGC
TAGGTTGTGCGTAATGGTGCACGTTGTCTTCTTTTACACCGTAACTGCTT
TTATTGTAATTTTCAAAAAGCACCCCTATCTTGGAACAGCTGACGTCTTG
TTCTGTTTCCAATTAATGACTCCAAGCAGATGTTAGGCTACCACTTCCCA
CACTGCCTGTATCTGTATAGCCGGTATAACCGCCCTTTGGCGTAACACAC
CAGCTTCGTAGGCACGCGGCGCGG Coding sequence (CDS) from alignment at xfSc0001566:61..2784- >transcript:BL82731_cuf1 ID=transcript:BL82731_cuf1|Name=transcript:BL82731_cuf1|organism=Branchiostoma lanceolatum|type=CDS|length=1746bp|location=Sequence derived from alignment at xfSc0001566:61..2784- (Branchiostoma lanceolatum)
ATGTCCAGCTACCTTGCTATGCAGCAGCCGTGTGACGCTGCAGCTGTCCT
GGCCAGAAGAGGGGATCTGGACACCCTCAGAGTGGCTGCAAAAATAGCAG
ACGCAGCAGGAAGTGAAGATCAGCTGTCTTCAGTGGCATGTAGATATGCA
TATGAGTGCCAACTTCAGTGTAAATGGCTGGAAGGGCAAGATCTTCTCAA
GAACCACAAACAACTACAGGTCCACAGATTAAATTTGTGCCTCCATGAAG
TCCTTGTTCACGGTCTCTACAACATTGGCTGTTTGTCACAAGGCTGGGCA
CAGATGATGGTTCCCTACAGCTGGGGAGAATTGGGCAGACCAATTTCTTT
ACCAGAGTTTTCTCTGCACACCGGTGAGTCGGACCCCTTGTGTCCTTGGT
CCCCCTACTTGGTCCAGGGTCAGTCATTCCTGGGCTACGTTGTACAAGTG
TGGTGTCAGTTCTCTGGACTTGACCTGACTACTGGCAACATTCTCCAGTT
GTGTCAGCAGCTTGCAGCAACACTCACAACAGGGAGCAAACCTGCCAATA
CTGCAAAGGTACAGTCATGTGACAGGCAGTAAATGTCCAGCTACCTTGCT
ATGCAGCAGCCGTGTGACGCTGCAGCTGTCCTGGCCAGAAGAGGGGATCT
GGACACCCTCAGAGTGGCTGCAAAAATAGCAGACGCAGCAGGAAGTGAAG
ATCAGCTGTCTTCAGTGGCATGTAGATATGCATATGAGTGCCAACTTCAG
TGTAAATGGCTGGAAGGGCAAGATCTTCTCAAGAACCACAAACAACTACA
GGTCCACAGATTAAATTTGTGCCTCCATGAAGTCCTTGTTCACGGTCTCT
ACAACATTGGCTGTTTGTCACAAGGCTGGGCACAGATGATGGTTCCCTAC
AGCTGGGGAGAATTGGGCAGACCAATTTCTTTACCAGAGTTTTCTCTGCA
CACCGGTGAGTCGGACCCCTTGTGTCCTTGGTCCCCCTACTTGGTCCAGG
GTCAGTCATTCCTGGGCTACGTTGTACAAGTGTGGTGTCAGTTCTCTGGA
CTTGACCTGACTACTGGCAACATTCTCCAGTTGTGTCAGCAGCTTGCAGC
AACACTCACAACAGGGAGCAAACCTGCCAATACTGCAAAGGTACAGTCAT
GTGACAGGCAGTAAATGTCCAGCTACCTTGCTATGCAGCAGCCGTGTGAC
GCTGCAGCTGTCCTGGCCAGAAGAGGGGATCTGGACACCCTCAGAGTGGC
TGCAAAAATAGCAGACGCAGCAGGAAGTGAAGATCAGCTGTCTTCAGTGG
CATGTAGATATGCATATGAGTGCCAACTTCAGTGTAAATGGCTGGAAGGG
CAAGATCTTCTCAAGAACCACAAACAACTACAGGTCCACAGATTAAATTT
GTGCCTCCATGAAGTCCTTGTTCACGGTCTCTACAACATTGGCTGTTTGT
CACAAGGCTGGGCACAGATGATGGTTCCCTACAGCTGGGGAGAATTGGGC
AGACCAATTTCTTTACCAGAGTTTTCTCTGCACACCGGTGAGTCGGACCC
CTTGTGTCCTTGGTCCCCCTACTTGGTCCAGGGTCAGTCATTCCTGGGCT
ACGTTGTACAAGTGTGGTGTCAGTTCTCTGGACTTGACCTGACTACTGGC
AACATTCTCCAGTTGTGTCAGCAGCTTGCAGCAACACTCACAACAGGGAG
CAAACCTGCCAATACTGCAAAGGTACAGTCATGTGACAGGCAGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| xfSc0001566 | genome | xfSc0001566:61..2784 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL82731_cuf1 |
| Biotype | protein_coding |
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