transcript:BL82334_cuf0 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL82334_cuf0
Unique Nametranscript:BL82334_cuf0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



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Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL82334_cuf0

>transcript:BL82334_cuf0-protein ID=transcript:BL82334_cuf0-protein|Name=transcript:BL82334_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=203bp
VRHPISAPSNIQHDLTDLENWSYDSHMKLHPGKCKVLHIYFSKVPYPTPS
LKINNIELQQVKVMKILGVFLQHDLRWNSHVDAICSKSSQRLFLLRKLKH
FHIPTEDLVTVYVTYVRPVLEYAATIWHSGLTTTLSNRIEKVQRRAVRII
MGADYTSYTDACVHLGLPSLQTRRLQLVTNFANTLSQSVHFQHLLPSTRG
HIS
Run BLAST on NCBI

mRNA from alignment at Sc0000007:3428057..3428667-

Legend: CDSpolypeptideexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL82334_cuf0 ID=transcript:BL82334_cuf0|Name=transcript:BL82334_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=611bp|location=Sequence derived from alignment at Sc0000007:3428057..3428667- (Branchiostoma lanceolatum)
GTCAGACACCCTATCTCAGCACCTTCTAATATACAACATGACCTGACTGA
TCTGGAAAACTGGTCATACGACAGCCACATGAAGCTCCATCCTGGCAAAT
GTAAAGTTCTTCATATATACTTCAGTAAGGTCCCGTACCCAACACCTTCC
CTGAAAATTAACAACATCGAACTACAACAGGTGAAAGTGATGAAGATCTT
GGGAGTATTCCTACAGCACGACCTGCGATGGAATTCCCACGTCGACGCCA
TCTGCAGCAAATCAAGCCAGCGCCTGTTCCTACTCCGTAAACTGAAACAC
TTCCATATCCCCACTGAAGATCTCGTCACAGTCTACGTCACATATGTTCG
CCCAGTTCTTGAGTATGCCGCTACTATCTGGCACTCAGGATTGACCACCA
CACTGAGCAACAGAATCGAGAAGGTCCAACGCCGTGCTGTACGGATCATT
ATGGGCGCGGACTACACGTCTTACACTGATGCCTGTGTTCACTTGGGTCT
ACCCTCCCTCCAGACACGTCGTCTTCAACTGGTCACGAACTTTGCGAACA
CTCTTAGTCAATCTGTACATTTCCAACACCTTTTGCCATCCACCAGAGGT
CACATTAGTAG

Coding sequence (CDS) from alignment at Sc0000007:3428057..3428667-

>transcript:BL82334_cuf0 ID=transcript:BL82334_cuf0|Name=transcript:BL82334_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=609bp|location=Sequence derived from alignment at Sc0000007:3428057..3428667- (Branchiostoma lanceolatum)
GTCAGACACCCTATCTCAGCACCTTCTAATATACAACATGACCTGACTGA
TCTGGAAAACTGGTCATACGACAGCCACATGAAGCTCCATCCTGGCAAAT
GTAAAGTTCTTCATATATACTTCAGTAAGGTCCCGTACCCAACACCTTCC
CTGAAAATTAACAACATCGAACTACAACAGGTGAAAGTGATGAAGATCTT
GGGAGTATTCCTACAGCACGACCTGCGATGGAATTCCCACGTCGACGCCA
TCTGCAGCAAATCAAGCCAGCGCCTGTTCCTACTCCGTAAACTGAAACAC
TTCCATATCCCCACTGAAGATCTCGTCACAGTCTACGTCACATATGTTCG
CCCAGTTCTTGAGTATGCCGCTACTATCTGGCACTCAGGATTGACCACCA
CACTGAGCAACAGAATCGAGAAGGTCCAACGCCGTGCTGTACGGATCATT
ATGGGCGCGGACTACACGTCTTACACTGATGCCTGTGTTCACTTGGGTCT
ACCCTCCCTCCAGACACGTCGTCTTCAACTGGTCACGAACTTTGCGAACA
CTCTTAGTCAATCTGTACATTTCCAACACCTTTTGCCATCCACCAGAGGT
CACATTAGT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL82334gene:BL82334Branchiostoma lanceolatumgene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL82334_cuf0-E1BL82334_cuf0-E1-1564476830-76292Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL82334_cuf0transcript:BL82334_cuf0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000007genomeSc0000007:3428057..3428667 -
Properties
Property NameValue
Transcript idBL82334_cuf0
Biotypeprotein_coding