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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL79954_cuf0 >transcript:BL79954_cuf0-protein ID=transcript:BL79954_cuf0-protein|Name=transcript:BL79954_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=152bp
LFKDRPDEVGQYKARAVEMADAIKTHFPYVSKSCTNYLHKVIEHVQELIE
HPSGLGSVGGPXLGSVGALSSEGNEAGNKLFRQLRVGHARKGNTYNGLRD
VLWAHWLYTSKTLRDKAAVTERSLCCGRCGRLGHNVRTCMLSESSESDEN
SS Run BLAST on NCBI mRNA from alignment at xpSc0039765:14785..16470- Legend: CDSpolypeptideexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL79954_cuf0 ID=transcript:BL79954_cuf0|Name=transcript:BL79954_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1686bp|location=Sequence derived from alignment at xpSc0039765:14785..16470- (Branchiostoma lanceolatum)
CTGTTTAAAGACAGGCCAGATGAGGTAGGCCAGTATAAGGCCAGGGCAGT
AGAAATGGCTGATGCCATTAAAACCCACTTTCCTTATGTCTCTAAGTCGT
GTACTAACTATCTACACAAGGTGATCGAACATGTGCAGGAGCTGATTGAG
CATCCATCTGGTTTGGGGTCTGTAGGGGGGCCTTNTTTGGGGTCTGTAGG
GGCCCTGTCTAGCGAAGGCAACGAGGCAGGGAATAAACTCTTCCGTCAGC
TTCGGGTGGGTCATGCCAGGAAGGGCAATACTTACAATGGCCTAAGAGAT
GTGCTTTGGGCTCACTGGCTCTACACATCCAAGACGTTAAGAGATAAGGC
AGCCGTGACAGAAAGATCACTATGTTGTGGACGTTGTGGGAGGCTAGGGC
ATAACGTCAGAACATGTATGTTGTCTGAGTCCTCAGAGTCAGATGAAAAC
TCTTCGTAATGCTTTAGTTGGCAGCATATGCATGCTTGAAATGTGAATAA
AACTTTACTGAATCAGTTTATTTCCTCAATATTTCTATGTACGTTATGCC
CTACCCTCCCGCAACAACCACAACACGGTGATCTTTCTGTCATGCATAAC
CATATATTAAGTTTATTGCAAGTTCTTTCCCGTAGGCTAATTGCAAGTAC
ATAAAACATGGAAGGACGGACAGAAAATTGGTAACAATATAGCATGTGAC
TATTCTAGTTCAAATACTAACACTAAATTCTATCTTATTTGGGTTTGACT
TCTTTCATAACGAAAGTGACTCAGCGTCAGATGAAAAAAATTTTGTATTG
CTTTAATTGAAAGCTTTTTCCCTGCCTCGTTGCCTCCCCTAGGACCCCAA
ATGCATGTTTGAAATGTCAGATGATAACTTTTTGTAATGCTTTAATTTAA
AGCTTAGCAGCATATGCATGTTTGAAATGTCAGATGACAACTTTTTGTAA
TGCTTGAAAGCTTAGCAGCATACGCATGTTTGAAATGACAGATGAAAACT
TTTTGTAATGCTTTAATGAAAAGCTTGGCAGCATATGCTGTTTGAAATGT
AAATAAAACTTTACATACTGAATACCACAACGTCTATGTCATGTTGATAT
ATTAGTTACATATAGTCTATTCTGTACTACATGTAGTTATCAACTGTGCA
TTTAGATGGAGAAATTTTCCAAATAAGTTATGTGAAGTAAGAGAGGCATA
GCTCAACATCTTTACCAGTCAGACTGAAGTGAATCTCCGTTCATACATGT
ACACGTATGTACAGTAAAGCACAACAAATTTGTAACAATAAAACAAATCA
AGATAGAAAAACAGTACATATTTTAGATGTTTACAGATTGCTACAACAGT
TCACTGATTTACATGTCCCTCCAATCAGGACTACAGTACTATCATTTAAT
CTTTGGCACGTATGGCCTGCACTGGCCATTTTACTTGGTGCATGGTGCAC
AACAGCCTTCCTTGTTCGTAGGTCCAAGATGTACATATTACTACTTGACT
CTGGGCGATGAAGACCAGACTTGTCATGACGGTACCCACCATAGACAACA
AAACGATCATCACAGAGAGCAGAGGCAGAGGCACTCGACACATACGAGTC
AGGCACCCCTTCCATGTGAGCCTCTGTCAGGGTATACTGGCCATCATAGA
TCTTAAGGCAAACTACATCTGAGATTGACAGTCTCT Coding sequence (CDS) from alignment at xpSc0039765:14785..16470- >transcript:BL79954_cuf0 ID=transcript:BL79954_cuf0|Name=transcript:BL79954_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=459bp|location=Sequence derived from alignment at xpSc0039765:14785..16470- (Branchiostoma lanceolatum)
CTGTTTAAAGACAGGCCAGATGAGGTAGGCCAGTATAAGGCCAGGGCAGT
AGAAATGGCTGATGCCATTAAAACCCACTTTCCTTATGTCTCTAAGTCGT
GTACTAACTATCTACACAAGGTGATCGAACATGTGCAGGAGCTGATTGAG
CATCCATCTGGTTTGGGGTCTGTAGGGGGGCCTTNTTTGGGGTCTGTAGG
GGCCCTGTCTAGCGAAGGCAACGAGGCAGGGAATAAACTCTTCCGTCAGC
TTCGGGTGGGTCATGCCAGGAAGGGCAATACTTACAATGGCCTAAGAGAT
GTGCTTTGGGCTCACTGGCTCTACACATCCAAGACGTTAAGAGATAAGGC
AGCCGTGACAGAAAGATCACTATGTTGTGGACGTTGTGGGAGGCTAGGGC
ATAACGTCAGAACATGTATGTTGTCTGAGTCCTCAGAGTCAGATGAAAAC
TCTTCGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| xpSc0039765 | genome | xpSc0039765:14785..16470 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL79954_cuf0 |
| Biotype | protein_coding |
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