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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL79777_cuf0 >transcript:BL79777_cuf0-protein ID=transcript:BL79777_cuf0-protein|Name=transcript:BL79777_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=133bp
HVNHKFLCLLRLHLGRAAIIILAVLLAVFVIAFATWIFFLRKPRRVQPEF
EEDTSVTCTKYSTLDSRISIESGPGTMFENDLYGSGFSDGSTGGNWSTEP
HSSEEGACAAAGDGTVFADNSLYGSATTLAKKK Run BLAST on NCBI mRNA from alignment at xfSc0002768:1..2024- Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL79777_cuf0 ID=transcript:BL79777_cuf0|Name=transcript:BL79777_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=2024bp|location=Sequence derived from alignment at xfSc0002768:1..2024- (Branchiostoma lanceolatum)
TCATGTAAATCACAAATTTTTATGTTTGCTGCGTTTACATTTAGGGAGGG
CAGCCATCATCATATTGGCAGTATTGCTTGCCGTTTTTGTGATTGCATTT
GCTACATGGATCTTTTTCTTAAGGTAAGACCAATATCTTTAACTTCAATT
GACAAACATGTTATTCATTTCACTGAAACGTGACGGCTATATTTGATGTA
CGTCATTTGCACATATACATGGTACTGTAGAAACACTCATAACGTTATAT
TTGAAACAAATGACGTTTTTGTCCTTTCTGTCAGAAAACCCAGGCGTGTT
CAACCTGAGTTTGAGGAGGACACCAGTGTTACGTGTACGAAGTACAGCAC
TCTGGATAGCCGCATTTCAATAGAGAGTGGTCCGGGCACGATGTTCGAGA
ATGATCTGTACGGTAGTGGGTAAGTACAACCATCCACAGGGCTGTGTATC
TCTTCCTGTAAAAGTGTTTAGGTAAAGATTTGGACCTCAATGTCAAGTGT
ACCTGTACATGTGATAGGTACAGGTCCTGACCGCAACAAGTTTGTAATGG
TAAAATTGTCTGAGGTAGAGGTCCTGACTTGTTGGTGTACCTGTACCTGT
AAAATTGGTGAAAAGTGTACCTGTGTCTAAACTGTTAAGGTGCAGGTTAG
TGTACATGTACATGTACATGTACATGTTAAATTGCTTTTGTAGCTGACTA
GTGTACCTGTACCTGAACTAACTAAAACACTATAGCTATAACTGAAACAA
TTTTTAAAAGACTATAAAGATAGGTACATGTAGATTCTCTCTCAAAAATG
AATATTTTGACAATCTAGCACTTATTCTGGTCATACTTGTTTTGATTAAA
GATGACAATTTACCGCTAAAAGACAGTTGGCTCCACTGTAAATTACAGAT
AATAGGCAAGTTTGTTTAGGTACAACAAATCAGGTCTGGCCCTTTACCTA
ATCGGTGTACCTGAAAAATCTTTTGGCAAAGTCCTGACTATGACCCTACC
AGGTACATGCAAACAGAAAAGTCGTCCAGAAAAGTTCAAGGGCACTGACT
TAAATCCACTGCTTAAAACCCTGAAAATTAGTTCCAAGCCTAAACAAAAA
AGAGGTGATTTAACTACACAAAGGAAGATATATCTTTCATATAGATCATG
CGATGTTGTCATTTTGTTTTATCGATTTTGTGAAATTGCTACCGCGCCCC
TTTCATCTTTGGTGTCCGTCGCATTCGCGTAGATTGATCACATGCGCCAA
AAGGTACGAAACAACAGCCAGAATTTATCATAGGACGATCTATTTTATGT
ATGCCGTTGAGTGGTGTAGCCGATAATTGAATAACAAAATGTACGAGGCA
CACCAATGGGTCCTTGACATGCTAAGGGACAAAGTAATATATTATGGTGA
GTTTAGCACATGCAGGCATATTTTTTTTGGTTTTTGATGATATAGGACCT
TATTCGTTATCCAGTTCCTACTACCCTGCTATATGGTGATTAAACAGAAC
TTTATTAATGACTTTACAATATTAGATGTTCAAATGCCTTATATTCTTTG
TAGTCTTATTAAAGGTCCAAAATTTTAGATTTGGATAAATTTTGAAATCG
ATGTTTTGGTTATTTGTTTACATTTTACTTTCTGTGATATGAGTGATATG
AGAAATTGTATCATATTGACATGTAAAAAACTACCGGTTTGTTTACATCC
AGCTAGCTTGTATTTATTGATACCACCAAAAAATGAGGGACCTTGGTGCG
GATTGTTTTTTGCGCTTTTTGATTTTTCGCTGTCTGCAAATGTGAAATTC
TGTGGTAAATCTGTTTTAAAAGCCTGTTAATGCCGATAACAGTAGTATTT
TCTAGTTTTAAGTTCGATTTCCTTTATTTCAGGTTTAGTGACGGAAGTAC
CGGGGGTAACTGGTCGACGGAGCCCCACAGTAGTGAAGAGGGCGCATGCG
CAGCAGCAGGGGACGGGACGGTATTTGCAGACAACTCTCTCTACGGATCA
GCTACAACATTGGCGAAAAAGAAA Coding sequence (CDS) from alignment at xfSc0002768:1..2024- >transcript:BL79777_cuf0 ID=transcript:BL79777_cuf0|Name=transcript:BL79777_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1197bp|location=Sequence derived from alignment at xfSc0002768:1..2024- (Branchiostoma lanceolatum)
CATGTAAATCACAAATTTTTATGTTTGCTGCGTTTACATTTAGGGAGGGC
AGCCATCATCATATTGGCAGTATTGCTTGCCGTTTTTGTGATTGCATTTG
CTACATGGATCTTTTTCTTAAGAAAACCCAGGCGTGTTCAACCTGAGTTT
GAGGAGGACACCAGTGTTACGTGTACGAAGTACAGCACTCTGGATAGCCG
CATTTCAATAGAGAGTGGTCCGGGCACGATGTTCGAGAATGATCTGTACG
GTAGTGGGTTTAGTGACGGAAGTACCGGGGGTAACTGGTCGACGGAGCCC
CACAGTAGTGAAGAGGGCGCATGCGCAGCAGCAGGGGACGGGACGGTATT
TGCAGACAACTCTCTCTACGGATCAGCTACAACATTGGCGAAAAAGAAAC
ATGTAAATCACAAATTTTTATGTTTGCTGCGTTTACATTTAGGGAGGGCA
GCCATCATCATATTGGCAGTATTGCTTGCCGTTTTTGTGATTGCATTTGC
TACATGGATCTTTTTCTTAAGAAAACCCAGGCGTGTTCAACCTGAGTTTG
AGGAGGACACCAGTGTTACGTGTACGAAGTACAGCACTCTGGATAGCCGC
ATTTCAATAGAGAGTGGTCCGGGCACGATGTTCGAGAATGATCTGTACGG
TAGTGGGTTTAGTGACGGAAGTACCGGGGGTAACTGGTCGACGGAGCCCC
ACAGTAGTGAAGAGGGCGCATGCGCAGCAGCAGGGGACGGGACGGTATTT
GCAGACAACTCTCTCTACGGATCAGCTACAACATTGGCGAAAAAGAAACA
TGTAAATCACAAATTTTTATGTTTGCTGCGTTTACATTTAGGGAGGGCAG
CCATCATCATATTGGCAGTATTGCTTGCCGTTTTTGTGATTGCATTTGCT
ACATGGATCTTTTTCTTAAGAAAACCCAGGCGTGTTCAACCTGAGTTTGA
GGAGGACACCAGTGTTACGTGTACGAAGTACAGCACTCTGGATAGCCGCA
TTTCAATAGAGAGTGGTCCGGGCACGATGTTCGAGAATGATCTGTACGGT
AGTGGGTTTAGTGACGGAAGTACCGGGGGTAACTGGTCGACGGAGCCCCA
CAGTAGTGAAGAGGGCGCATGCGCAGCAGCAGGGGACGGGACGGTATTTG
CAGACAACTCTCTCTACGGATCAGCTACAACATTGGCGAAAAAGAAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| xfSc0002768 | genome | xfSc0002768:1..2024 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL79777_cuf0 |
| Biotype | protein_coding |
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