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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL79200_cuf0 >transcript:BL79200_cuf0-protein ID=transcript:BL79200_cuf0-protein|Name=transcript:BL79200_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=283bp
MWSQWRQHYSSLFNSVNASTCKSYVDDTIKAGVSYDPGMFTPVSEICNML
PNGKSCDVDGLSAEHLKNAGPRLITLLSLLFSAMLLHGHIPPVLLNVVLV
PLIKKQNLNPSIKNNYRPIAISSPLFKLFESILLDRMESYLSTPANQFGF
KQHHGTDMCIFALKEVISYFKCRGSPVFVCFLDASKAFDRVNHYTLFNKL
LNRGVPVYLVRIIVCWFHMLSFRVRWGTTVSDSFSYSNGVPQGSILSPIL
FNIYMADLSDQLNNVKVGCFIGNVSVNHLNVCR Run BLAST on NCBI mRNA from alignment at Sc0000602:17602..20532- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL79200_cuf0 ID=transcript:BL79200_cuf0|Name=transcript:BL79200_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=2931bp|location=Sequence derived from alignment at Sc0000602:17602..20532- (Branchiostoma lanceolatum)
ATATGTGGAGCCAGTGGAGGCAACACTACAGCTCTCTATTTAACTCTGTC
AATGCCAGTACCTGTAAGTCCTACGTAGACGACACTATCAAAGCGGGCGT
TAGTTATGACCCTGGTATGTTTACACCTGTATCTGAAATATGTAACATGC
TCCCTAATGGGAAGTCCTGTGACGTAGATGGTTTGTCAGCCGAACACCTG
AAGAACGCGGGGCCTCGACTGATCACGTTACTCTCCCTGTTATTCTCAGC
CATGTTGCTTCACGGCCACATCCCCCCAGTCCTGCTTAATGTTGTTCTTG
TCCCGTTAATCAAAAAACAAAATCTAAACCCCTCAATCAAAAACAACTAC
CGGCCGATTGCCATTTCCAGTCCCCTGTTTAAACTGTTTGAATCTATTCT
TCTTGATCGTATGGAGAGCTATTTATCTACTCCAGCGAACCAGTTTGGCT
TCAAACAGCATCACGGGACGGATATGTGCATCTTCGCCCTTAAAGAGGTT
ATCTCTTACTTTAAATGTCGAGGCTCCCCAGTCTTTGTATGTTTCCTTGA
CGCTTCGAAAGCCTTCGATCGTGTTAACCACTATACATTGTTTAACAAAC
TGCTCAATAGAGGAGTGCCTGTATATTTAGTACGTATCATCGTATGTTGG
TTCCATATGCTGTCCTTCAGAGTGCGCTGGGGGACTACCGTGTCTGATAG
CTTCAGCTACAGCAACGGTGTTCCCCAGGGGAGCATATTGTCTCCAATTT
TATTCAACATATATATGGCTGATCTCAGCGACCAGTTAAACAATGTCAAA
GTGGGCTGTTTTATTGGCAATGTTTCCGTAAATCACTTGAATGTATGCAG
ATGATATATGCCTTATCTGTCCTTCAGCGAAAGCCTTACAAAAGTTAATT
TGTATATGTGAGGCATTTGGTGCTGATAATGATGTCATATTTTGTGATAA
GAAAACCAATTGTATGTATTTTCCATGCCCCCGCCTACGTTTGAATGGTG
CGCCACCCTCAATTGAGTTATACGGCCACATACTTGGGTTTCCAAATTAC
CCCCAACCTTTCTGACGACGACTCAATTCGAAAAATAACTAGACAGCTCT
ACGCTAAAGCAAATTCTCTCTCACGCAAATTCTACCTATGCTCAGCAGAG
GTGAAGCGCATCCTTTTTATATCACAGTGTTCTGCCATGTACTGCGCACA
ACTTTGGACAAAACACAGTGCCGGTGCAATGCAGAGACTCCGGGTGGCTT
ACCATGACGCTTTTAAGATGTTAATGTCTCAGCCTAGGAGTACTAGTAAC
TCTTTACTCTTCTCGAGCTGTCGAGTTGATACTTTCGACGCCAGGCGGCG
TAAGTTGGCCCACTCATTTGTGACGTGTCTCCTTGCGTCTAGCAACGGTA
TAATCCAACGGCTATTGAATTCTGAGATTTTTTCACTTAGCGGGCATTGG
TCCTACTATTGTCGACTAGTCCTACCGCCATCTCGTTTCTACACTACTTG
ATGCAATATTTTTGTCGTTGTTGTTATATGTAGATGTTTGTGTATTGTCT
CTGTTGTTCCTTTTTTAATATGGACCCTGGGCCTGAGTCAAAGAATAAAT
GAATGAATGAATAAATGATCGTCTTCACCAAAATAACAGAAGTTGTCCAA
AGTATGACCTTAAAAAGGTTATGCAAACATATGTAATCCATTATGCATAT
TAGGTCCTTATTAGCATAATTTGATTCAACGATGTTCACATTCACATAAC
TTCCAAATGCCACAAGTATGAAATTGCCATCATTTACCTGTACGGAATTC
TAGTAGTTTCTCATTAATTATGCAAATTAGGCCTACAATTGCATATTTTC
TATCTATCAAACTTCCTCTCTTCCTCAGTTACAAATGTCACATATTTGAA
TAGTCATATCATGGTACACAGCGTTTTTTTAAATTGTCTCATTAATTATG
CAAATTAGAATCTGATTTGCATAATTATCGTCCAATCATACAAAGTATCA
CCTGAGCTATCTACATACCAAAAATCATGCACATCCATCAAGCCCATCTT
GAGTTATAGTATTTTCTCATTTATTATGCAAATGAGGTCCTCATTTGCAT
AGTTGATATCTATTGATATTTCTCTCTTCCTCAGTTACATATGTCACATG
TTTGAGAGTCCTATCATGGAATTTGGCGGCTGTATAAACTTTCCTCGTTA
ATTATGCAAATTGCATGCTGATTTGCATAATAAGTATCTAATCATGTACA
TCATCACTCAAGTTATCTACTTACCAAAAATTATGACCATCCATCAAGCC
CTTCTTGAGTTATTCCCTTTCAAAGTCTGAAGCAAAACCTAATCCTGCAG
TTCCAAAAAAGCCGCTAGGGGGCCAAAACCTATACCACTTACTCTCTGTC
CAAAGACCTATCTACCACTCAAAAATCAGTTCATAGCATGTCCAGACCAC
GAGATATCAAAACAGGAAGTTCTGCTGCAGTACCGTAAGAAGACGCTAGG
GGACCCAAAATCTAATCATTTCCATGTCTCATCAAGACCAACCCACCTAC
CAAATATCAAAACATTCCATCTAAGCCTTCTTGAGTTATGCTGTTTGTTA
CACACACACACAAACACATTAACACACAAACGCTACCCTCTGCATAACCT
TCTCGGCGAAGGTAAAGAGCTGCTAGGGGGCCTAAACCTATAGCACTTAC
TCTCTGTCCAATGTGCTATCTACCACTCAAAAATCAGTTCATAGCATGTC
CAGACCACGAGATATCAAAACAGGAAGTTCTGCTGCAGTACCATAACAAG
CCGCTAGGGGACCCAAAATCTATTCACTTCTAGGTCTCATCAAGACCTAC
CCACCTACCAAATATCAAGACAATCCATCCGAGCCTTCTTGAGTTATGCT
GGTCAATTACAAACAGACACACACACACACA Coding sequence (CDS) from alignment at Sc0000602:17602..20532- >transcript:BL79200_cuf0 ID=transcript:BL79200_cuf0|Name=transcript:BL79200_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=852bp|location=Sequence derived from alignment at Sc0000602:17602..20532- (Branchiostoma lanceolatum)
ATGTGGAGCCAGTGGAGGCAACACTACAGCTCTCTATTTAACTCTGTCAA
TGCCAGTACCTGTAAGTCCTACGTAGACGACACTATCAAAGCGGGCGTTA
GTTATGACCCTGGTATGTTTACACCTGTATCTGAAATATGTAACATGCTC
CCTAATGGGAAGTCCTGTGACGTAGATGGTTTGTCAGCCGAACACCTGAA
GAACGCGGGGCCTCGACTGATCACGTTACTCTCCCTGTTATTCTCAGCCA
TGTTGCTTCACGGCCACATCCCCCCAGTCCTGCTTAATGTTGTTCTTGTC
CCGTTAATCAAAAAACAAAATCTAAACCCCTCAATCAAAAACAACTACCG
GCCGATTGCCATTTCCAGTCCCCTGTTTAAACTGTTTGAATCTATTCTTC
TTGATCGTATGGAGAGCTATTTATCTACTCCAGCGAACCAGTTTGGCTTC
AAACAGCATCACGGGACGGATATGTGCATCTTCGCCCTTAAAGAGGTTAT
CTCTTACTTTAAATGTCGAGGCTCCCCAGTCTTTGTATGTTTCCTTGACG
CTTCGAAAGCCTTCGATCGTGTTAACCACTATACATTGTTTAACAAACTG
CTCAATAGAGGAGTGCCTGTATATTTAGTACGTATCATCGTATGTTGGTT
CCATATGCTGTCCTTCAGAGTGCGCTGGGGGACTACCGTGTCTGATAGCT
TCAGCTACAGCAACGGTGTTCCCCAGGGGAGCATATTGTCTCCAATTTTA
TTCAACATATATATGGCTGATCTCAGCGACCAGTTAAACAATGTCAAAGT
GGGCTGTTTTATTGGCAATGTTTCCGTAAATCACTTGAATGTATGCAGAT
GA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000602 | genome | Sc0000602:17602..20532 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL79200_cuf0 |
| Biotype | protein_coding |
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