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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL79182_cuf1 >transcript:BL79182_cuf1-protein ID=transcript:BL79182_cuf1-protein|Name=transcript:BL79182_cuf1|organism=Branchiostoma lanceolatum|type=polypeptide|length=445bp
FFLVLLCKRSHIFWARSRLFFGVSFRVFFFLFEPIHLLYSLAMSEQLKGG
KRKKKSKHVASLSDSETNVRESKHASSRTSDIRREKFLVALPNKPATEAE
RAQKDPPAPQGNLATGGPSEAAGGSGTSASMPVHVPVGHDTSKHPDGGMP
HLDPVNNASPPKTRENPGLGNPFDKLPGFDSTGFLRWLRENLAPEGPHTV
TPGGSHDSRPVATEPEGLEDGEISEDDPSLVELGSDVEAGKALSFDNPFA
ADTAKQWDVPDEIKSFLQDVFSHKLSYTQLKERKELLPTPEKLQCILKAP
ELSAVVNAMVNSTTIANDKFLKDIQDVMLFAAHPLVELLAAIKGSDSPLD
PNAVSKSVESTLVALGTASFSLTQVRREACSKEMKPEVKNMIKSDLPACA
SKHLFGDAFVEKLTALDQAKRSLNKAYPQPAKASKPSPRGSGYKF Run BLAST on NCBI mRNA from alignment at Sc0000101:74738..76075+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL79182_cuf1 ID=transcript:BL79182_cuf1|Name=transcript:BL79182_cuf1|organism=Branchiostoma lanceolatum|type=mRNA|length=1338bp|location=Sequence derived from alignment at Sc0000101:74738..76075+ (Branchiostoma lanceolatum)
ATTTTTCCTTGTGTTGTTGTGCAAGCGGTCGCACATTTTCTGGGCTCGCT
CGCGCCTCTTTTTTGGCGTTTCTTTTCGAGTTTTTTTCTTTTTGTTCGAG
CCTATACACCTCCTGTATTCGCTAGCGATGTCTGAGCAGCTAAAGGGAGG
GAAAAGGAAGAAGAAGTCGAAGCACGTGGCTTCGCTATCTGACTCGGAGA
CTAATGTCCGAGAGTCCAAGCATGCGTCTTCACGCACTAGCGACATACGG
CGGGAGAAGTTCCTGGTCGCACTGCCGAATAAACCGGCTACCGAGGCAGA
GCGGGCCCAGAAGGACCCGCCGGCACCACAGGGGAATTTGGCCACGGGAG
GGCCATCTGAGGCGGCCGGAGGCAGCGGCACAAGTGCTAGCATGCCCGTA
CATGTGCCGGTTGGCCATGATACTAGTAAACACCCGGACGGCGGGATGCC
ACACCTGGACCCCGTCAACAACGCCTCTCCCCCTAAAACCCGAGAGAATC
CCGGATTGGGAAACCCTTTCGACAAGCTGCCCGGCTTTGACTCCACTGGT
TTTCTGCGGTGGTTACGAGAAAACCTAGCGCCAGAGGGACCACACACGGT
CACTCCCGGCGGCAGCCATGACAGCCGCCCAGTCGCTACCGAGCCGGAAG
GCTTGGAGGACGGGGAAATCTCTGAGGATGACCCCTCACTTGTGGAGCTA
GGCTCAGACGTGGAGGCAGGTAAGGCTTTGTCCTTTGATAATCCTTTTGC
GGCAGATACGGCTAAACAGTGGGATGTGCCGGATGAGATAAAGTCTTTCT
TGCAGGATGTTTTTTCTCACAAACTATCCTATACTCAACTGAAAGAGAGG
AAAGAATTACTCCCTACACCAGAAAAACTACAATGCATTCTTAAAGCCCC
AGAACTGAGCGCAGTTGTTAATGCCATGGTTAATTCTACCACGATCGCTA
ATGATAAATTCCTGAAAGATATACAGGATGTTATGTTGTTTGCTGCACAC
CCACTAGTTGAATTGTTAGCCGCTATTAAAGGTTCAGATAGTCCTTTGGA
CCCAAATGCTGTCTCAAAATCAGTTGAAAGCACCCTGGTAGCACTGGGCA
CTGCTTCTTTTTCCCTCACTCAAGTTAGGAGGGAGGCCTGTAGCAAAGAA
ATGAAGCCAGAGGTCAAGAACATGATTAAATCTGACCTTCCAGCCTGTGC
CTCTAAACACTTGTTTGGTGATGCTTTTGTCGAGAAATTGACTGCCTTAG
ATCAGGCAAAGCGCTCCTTGAATAAAGCCTACCCCCAGCCTGCTAAAGCG
TCTAAGCCTAGCCCCCGCGGAAGCGGGTACAAATTCCG Coding sequence (CDS) from alignment at Sc0000101:74738..76075+ >transcript:BL79182_cuf1 ID=transcript:BL79182_cuf1|Name=transcript:BL79182_cuf1|organism=Branchiostoma lanceolatum|type=CDS|length=1335bp|location=Sequence derived from alignment at Sc0000101:74738..76075+ (Branchiostoma lanceolatum)
TTTTTCCTTGTGTTGTTGTGCAAGCGGTCGCACATTTTCTGGGCTCGCTC
GCGCCTCTTTTTTGGCGTTTCTTTTCGAGTTTTTTTCTTTTTGTTCGAGC
CTATACACCTCCTGTATTCGCTAGCGATGTCTGAGCAGCTAAAGGGAGGG
AAAAGGAAGAAGAAGTCGAAGCACGTGGCTTCGCTATCTGACTCGGAGAC
TAATGTCCGAGAGTCCAAGCATGCGTCTTCACGCACTAGCGACATACGGC
GGGAGAAGTTCCTGGTCGCACTGCCGAATAAACCGGCTACCGAGGCAGAG
CGGGCCCAGAAGGACCCGCCGGCACCACAGGGGAATTTGGCCACGGGAGG
GCCATCTGAGGCGGCCGGAGGCAGCGGCACAAGTGCTAGCATGCCCGTAC
ATGTGCCGGTTGGCCATGATACTAGTAAACACCCGGACGGCGGGATGCCA
CACCTGGACCCCGTCAACAACGCCTCTCCCCCTAAAACCCGAGAGAATCC
CGGATTGGGAAACCCTTTCGACAAGCTGCCCGGCTTTGACTCCACTGGTT
TTCTGCGGTGGTTACGAGAAAACCTAGCGCCAGAGGGACCACACACGGTC
ACTCCCGGCGGCAGCCATGACAGCCGCCCAGTCGCTACCGAGCCGGAAGG
CTTGGAGGACGGGGAAATCTCTGAGGATGACCCCTCACTTGTGGAGCTAG
GCTCAGACGTGGAGGCAGGTAAGGCTTTGTCCTTTGATAATCCTTTTGCG
GCAGATACGGCTAAACAGTGGGATGTGCCGGATGAGATAAAGTCTTTCTT
GCAGGATGTTTTTTCTCACAAACTATCCTATACTCAACTGAAAGAGAGGA
AAGAATTACTCCCTACACCAGAAAAACTACAATGCATTCTTAAAGCCCCA
GAACTGAGCGCAGTTGTTAATGCCATGGTTAATTCTACCACGATCGCTAA
TGATAAATTCCTGAAAGATATACAGGATGTTATGTTGTTTGCTGCACACC
CACTAGTTGAATTGTTAGCCGCTATTAAAGGTTCAGATAGTCCTTTGGAC
CCAAATGCTGTCTCAAAATCAGTTGAAAGCACCCTGGTAGCACTGGGCAC
TGCTTCTTTTTCCCTCACTCAAGTTAGGAGGGAGGCCTGTAGCAAAGAAA
TGAAGCCAGAGGTCAAGAACATGATTAAATCTGACCTTCCAGCCTGTGCC
TCTAAACACTTGTTTGGTGATGCTTTTGTCGAGAAATTGACTGCCTTAGA
TCAGGCAAAGCGCTCCTTGAATAAAGCCTACCCCCAGCCTGCTAAAGCGT
CTAAGCCTAGCCCCCGCGGAAGCGGGTACAAATTC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000101 | genome | Sc0000101:74738..76075 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL79182_cuf1 |
| Biotype | protein_coding |
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