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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL79162_cuf0 >transcript:BL79162_cuf0-protein ID=transcript:BL79162_cuf0-protein|Name=transcript:BL79162_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=231bp
ETISKMVHHLVFMAVAASVFGPSECWNATEPSVNGSWLQSGDNTTEWSMF
SDFQASTVIDMPPNTTVLDTQEPRVSKSTEPVSLVSGTVATTTSPPSGTS
SKLSTAWASSTTDGTARSSASTTTSLFTSEPNSTSITTSQPTPSSITHPT
SITPTATPTALSSSPRKGTLNSLLSTLLSSHGISTWLPAAASTTAGNAGQ
DTTASKTASTQVYQGAGLGPPVVVTNRIMFR Run BLAST on NCBI mRNA from alignment at Sc0000158:184233..186436- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL79162_cuf0 ID=transcript:BL79162_cuf0|Name=transcript:BL79162_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=2204bp|location=Sequence derived from alignment at Sc0000158:184233..186436- (Branchiostoma lanceolatum)
GAAACCATAAGCAAAATGGTTCATCACTTGGTATTCATGGCTGTGGCAGC
TTCTGTTTTCGGTAAGTGTTTCTTATTATTTACTATATATAAGGTACGTC
TTTATACCCATTTACATGGCGTAAGTATAAGATAACCTCTGAATGAGCAC
GGTAGGTACACGTCAAGATAAATGTCTATTTTGCAGTATTACGTCACGTT
TTCTGTAATCTTGACAGGGCCGTCAGAATGTTGGAATGCGACTGAGCCTT
CCGTAAATGGTTCCTGGCTACAATCTGGCGACAACACGACGGAGTGGTCA
ATGTTTAGTGACTTCCAAGCGTCTACTGTCATCGACATGCCCCCAAACAC
CACAGTCTTAGATACGCAGGAACCTAGAGTTAGTAAGTCAACCGAGCCAG
TGTCTTTAGTAAGTGGTACCGTGGCTACTACCACCTCGCCGCCGTCAGGA
ACGTCCAGCAAACTATCAACAGCCTGGGCATCTTCGACAACGGATGGAAC
AGCACGATCTTCCGCTTCAACGACAACGTCATTGTTTACTTCTGAACCAA
ACTCCACTTCAATAACTACATCGCAACCGACACCGAGCTCAATAACACAT
CCTACATCAATAACACCAACTGCTACACCTACAGCATTGTCTTCATCACC
AAGGAAAGGGACTTTGAACTCGTTACTGTCTACACTACTATCTAGCCATG
GCATATCAACATGGCTACCTGCGGCAGCTTCAACCACAGCAGGGAACGCC
GGCCAAGATACTACAGCGTCGAAAACAGCGTCTACTCAAGTATACCAAGG
CGCTGGGCTAGGTCCCCCAGTTGTGGTCACCAATCGTATCATGTTCAGGT
AACGTCGGATTTATTCATTTTAAACCCTCAAGGAGTGCATTTAACGAACA
TTTAACGTACATTTATAAAAGCAACGACACAAGTAGTCTTTCACATCTGA
ATCATTTGTGTACATTGTTCCGGTATTCACAACATTCTAATCAAAAGACA
AGTTTTTGTTACCAAAACGGTCAAATATTCACAATCTTGTATTAGATTTA
GTAACTATGAGAATTTTTTTTGCTTTGATCCTACGTGTACTAACGGAAAC
AACATTACTACTGCAACACAACGCAGTGACGTAACAACACAACGGAGTGA
CGTAACAAGCCGTCAGAGCACCCCTGTCCCAACGGGGGAGAGAACATTTA
AAGACCCGCGTAAGTTTGTTTCAGCACGTTGCAATAAATTGTCATTGGGC
ACAGGCGACTAACATACACTACAAGAAGGAATGGCTCAAACTTTTATTCA
ATCGTCGCTAAATTAGGTCTAGATTTGTTAACCTTTAAAAACAATTGCAC
ACCCATCTTAGCTTTTTGATAACATCTAGAGGATAAGATTTTGAAATGTC
AACGATAAGGTACCAAATACATGCCTTTCCGAATCAATAGATGTATCATA
GTGCCAACCACCATATATAGTCACATAGATTACACTACCTTTGTTCCGAA
CAATGAGCTGTTGAAATGGTCTAATATTAGGAATGTGAGTATGTGTTTGT
GTGTCTGTGTGTGTGTGTTTGTGTGTGTGTCTATCTGTGTGTGTGTGTGC
GTGTGTGTGTGCATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
AGGTTGGTGTTTGAATACTATAACTTAAGAATGACTTGGTGTAGTATCTT
GATTCAACTTTGTCTTCCTAGCGGCTTGTACTGCAGTGGAACTTCTGGTT
TTGATATCTTGTTTAATTAGGCGCTGATCAAGTGATGACTACGGGAGAGA
AACTGACGACGGGAATGCTGGCTGGAATAGGCGTGCTGGCTCTGTTGTGT
ATAGGTCTCGGAGTCTGCGCGCTTTCGGCGAAATCCAACGAGCGCAAAAC
TAAGGTACAGCCTATTGGAGGAAACAATACATTGGTCTCCAATGAAAACG
GAGGGGTCGTTGCAATTACCTAGATTATAATGACATGATAAATGATGAAT
ATAGAGTGTGAAAATACGTTCTGTCCGATTGTGTACACAATATTGTCATT
ATATGTATATATATATATGAACATAGTTTACACTTCATACGTAACATATT
TTGACAACGTCAGAGATTTAATGATGATCAATACCATTGGATGAATCCGA
CGTCAATGCAAACACATAACAATATTTATGATATATGTATACATTTATCA
TGAT Coding sequence (CDS) from alignment at Sc0000158:184233..186436- >transcript:BL79162_cuf0 ID=transcript:BL79162_cuf0|Name=transcript:BL79162_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1392bp|location=Sequence derived from alignment at Sc0000158:184233..186436- (Branchiostoma lanceolatum)
GAAACCATAAGCAAAATGGTTCATCACTTGGTATTCATGGCTGTGGCAGC
TTCTGTTTTCGGGCCGTCAGAATGTTGGAATGCGACTGAGCCTTCCGTAA
ATGGTTCCTGGCTACAATCTGGCGACAACACGACGGAGTGGTCAATGTTT
AGTGACTTCCAAGCGTCTACTGTCATCGACATGCCCCCAAACACCACAGT
CTTAGATACGCAGGAACCTAGAGTTAGTAAGTCAACCGAGCCAGTGTCTT
TAGTAAGTGGTACCGTGGCTACTACCACCTCGCCGCCGTCAGGAACGTCC
AGCAAACTATCAACAGCCTGGGCATCTTCGACAACGGATGGAACAGCACG
ATCTTCCGCTTCAACGACAACGTCATTGTTTACTTCTGAACCAAACTCCA
CTTCAATAACTACATCGCAACCGACACCGAGCTCAATAACACATCCTACA
TCAATAACACCAACTGCTACACCTACAGCATTGTCTTCATCACCAAGGAA
AGGGACTTTGAACTCGTTACTGTCTACACTACTATCTAGCCATGGCATAT
CAACATGGCTACCTGCGGCAGCTTCAACCACAGCAGGGAACGCCGGCCAA
GATACTACAGCGTCGAAAACAGCGTCTACTCAAGTATACCAAGGCGCTGG
GCTAGGTCCCCCAGTTGTGGTCACCAATCGTATCATGTTCAGGTAAGAAA
CCATAAGCAAAATGGTTCATCACTTGGTATTCATGGCTGTGGCAGCTTCT
GTTTTCGGGCCGTCAGAATGTTGGAATGCGACTGAGCCTTCCGTAAATGG
TTCCTGGCTACAATCTGGCGACAACACGACGGAGTGGTCAATGTTTAGTG
ACTTCCAAGCGTCTACTGTCATCGACATGCCCCCAAACACCACAGTCTTA
GATACGCAGGAACCTAGAGTTAGTAAGTCAACCGAGCCAGTGTCTTTAGT
AAGTGGTACCGTGGCTACTACCACCTCGCCGCCGTCAGGAACGTCCAGCA
AACTATCAACAGCCTGGGCATCTTCGACAACGGATGGAACAGCACGATCT
TCCGCTTCAACGACAACGTCATTGTTTACTTCTGAACCAAACTCCACTTC
AATAACTACATCGCAACCGACACCGAGCTCAATAACACATCCTACATCAA
TAACACCAACTGCTACACCTACAGCATTGTCTTCATCACCAAGGAAAGGG
ACTTTGAACTCGTTACTGTCTACACTACTATCTAGCCATGGCATATCAAC
ATGGCTACCTGCGGCAGCTTCAACCACAGCAGGGAACGCCGGCCAAGATA
CTACAGCGTCGAAAACAGCGTCTACTCAAGTATACCAAGGCGCTGGGCTA
GGTCCCCCAGTTGTGGTCACCAATCGTATCATGTTCAGGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000158 | genome | Sc0000158:184233..186436 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL79162_cuf0 |
| Biotype | protein_coding |
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