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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL79042_cuf0 >transcript:BL79042_cuf0-protein ID=transcript:BL79042_cuf0-protein|Name=transcript:BL79042_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=140bp
ELEDTEVLADNTNALTLDQPREQNRRFVNNITPTRVDVSSEQLYRCVTNI
GNTLEGLHKRHFEALQEVKETMGARIAELKEEVVYLRQRLDDGTQEDGAS
SNPPKRQKKHSKVLSEAVRRLHNTTTSELPSLPKPQHLAI Run BLAST on NCBI mRNA from alignment at Sc0000036:149236..151083- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL79042_cuf0 ID=transcript:BL79042_cuf0|Name=transcript:BL79042_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1848bp|location=Sequence derived from alignment at Sc0000036:149236..151083- (Branchiostoma lanceolatum)
CGAATTAGAAGACACAGAGGTACTCGCGGACAACACCAACGGTATGTACA
ATTACTCCTACATGTACATGCCCGTAGCCAGGGGGGGGGGGGGGGCGGAC
GAACCCCCCCATTGGCTTGAAGGNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAGAAATTGAAACGCTCAAGG
GTCCACTTTTTAACGTCCAAGGGTTTTTTTTCAAGGTGGATCTATTTGTA
TCACCAACGGAGCTGAAATCCTAGAAAAACTGCTAACTTTGTCTCTGATT
TCTTCCTTTGAAATCCTCTCAAAAACACAGGAAATGCCATATCAGAAGGT
TCAAATTCTAAAATTTCCCGGGGGGGCATACCCCCGAACCCCCCTAGGAA
GCTCGCGCCTGCGGCGCTCGTCTCGCGCCTTCGGCGCTCGACGGTCCCTT
CAAAATTAAAAAGAACCCCCCCACTCAAAATCCTGGCTACGGGCATGAAG
TACACATGTCTTTTGTTGCATATTGTTGATCGACACTTTTTCACTTACTC
TTCTTCCTTCATTTATCGTCCCACGGATAGCGTTGACGCTTGATCAGCCA
CGTGAGCAGAACAGACGCTTTGTGAATAACATCACACCAACGAGAGTAGA
CGTTAGCAGCGAGCAACTCTACCGCTGCGTCACGAACATTGGTAACACAC
TTGAAGGCCTCCACAAACGCCATTTCGAGGCCTTGCAGGAGGTCAAGGAA
ACGATGGGGGCGCGGATCGCGGAGCTCAAGGAGGAAGTCGTCTACCTGCG
ACAGCGCCTGGATGACGGAACCCAGGAGGACGGCGCCTCGTCGAATCCCC
CCAAACGACAGAAGAAACATTCAAAAGTTTTATCGGTGAGTTTATTTTTC
GTTATCTGAAAATCCAGGTATATGTGTATCGTATCATCTAACTCTATAGA
TATATACTATCATATGTTTTCACGTTGGCGGTTTAAATATGTCTGCTAAC
TGTTCCACATTTAAACCATCCATATTGTCAAGTAGTAACTTTGTTTTTTT
AGACCTGTTACACACCTGGTTTGCCTCTACAAAGGAGACAGGAGTTCGCC
ACTGAAGTCATGTCTAATTTCAATGCAAATGATGCCGGCAATACACACTG
ACATACAATTCACACTCTATTGTATTGTCTGTTTTCTCGACAGGAGGCAG
TGCGGCGCCTTCACAATACAACAACAAGCGAGCTTCCTAGTTTGCCTAAA
CCACAACATCTGGCAATTTGAAAGCATATCCACCAATACAACGTGGGAAA
GTGTCAATTTTTGTATAGAGTTTGTTTGTAATGGCAGGGTGTTCGACCCA
GAACCAAGCGGTCTCGGGTTCGACGCCACCGATGTTGTGCCCTTGGGGAA
GGCACTTTACACGAATTTCCTCACTCCACCCACCCAGGTGTAAAAATGGG
TACTACATTGTTCTGTGTACGTGGCACTGTTAACATAAGTTACATGTATG
AGTGCAGTGCCACGTCGTCCTTGTCTGTCAAAAAGTGAATTAAGAAAAAA
GAAGAAGAAAATGCTGTAAATAATTTTATTACATGATATAATATGTCTTA
TTAGATCACATTGGACACCACGTTATACGTTATGCCTTAAACAAGAAA Coding sequence (CDS) from alignment at Sc0000036:149236..151083- >transcript:BL79042_cuf0 ID=transcript:BL79042_cuf0|Name=transcript:BL79042_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1269bp|location=Sequence derived from alignment at Sc0000036:149236..151083- (Branchiostoma lanceolatum)
GAATTAGAAGACACAGAGGTACTCGCGGACAACACCAACGCGTTGACGCT
TGATCAGCCACGTGAGCAGAACAGACGCTTTGTGAATAACATCACACCAA
CGAGAGTAGACGTTAGCAGCGAGCAACTCTACCGCTGCGTCACGAACATT
GGTAACACACTTGAAGGCCTCCACAAACGCCATTTCGAGGCCTTGCAGGA
GGTCAAGGAAACGATGGGGGCGCGGATCGCGGAGCTCAAGGAGGAAGTCG
TCTACCTGCGACAGCGCCTGGATGACGGAACCCAGGAGGACGGCGCCTCG
TCGAATCCCCCCAAACGACAGAAGAAACATTCAAAAGTTTTATCGGAGGC
AGTGCGGCGCCTTCACAATACAACAACAAGCGAGCTTCCTAGTTTGCCTA
AACCACAACATCTGGCAATTTGAGAATTAGAAGACACAGAGGTACTCGCG
GACAACACCAACGCGTTGACGCTTGATCAGCCACGTGAGCAGAACAGACG
CTTTGTGAATAACATCACACCAACGAGAGTAGACGTTAGCAGCGAGCAAC
TCTACCGCTGCGTCACGAACATTGGTAACACACTTGAAGGCCTCCACAAA
CGCCATTTCGAGGCCTTGCAGGAGGTCAAGGAAACGATGGGGGCGCGGAT
CGCGGAGCTCAAGGAGGAAGTCGTCTACCTGCGACAGCGCCTGGATGACG
GAACCCAGGAGGACGGCGCCTCGTCGAATCCCCCCAAACGACAGAAGAAA
CATTCAAAAGTTTTATCGGAGGCAGTGCGGCGCCTTCACAATACAACAAC
AAGCGAGCTTCCTAGTTTGCCTAAACCACAACATCTGGCAATTTGAGAAT
TAGAAGACACAGAGGTACTCGCGGACAACACCAACGCGTTGACGCTTGAT
CAGCCACGTGAGCAGAACAGACGCTTTGTGAATAACATCACACCAACGAG
AGTAGACGTTAGCAGCGAGCAACTCTACCGCTGCGTCACGAACATTGGTA
ACACACTTGAAGGCCTCCACAAACGCCATTTCGAGGCCTTGCAGGAGGTC
AAGGAAACGATGGGGGCGCGGATCGCGGAGCTCAAGGAGGAAGTCGTCTA
CCTGCGACAGCGCCTGGATGACGGAACCCAGGAGGACGGCGCCTCGTCGA
ATCCCCCCAAACGACAGAAGAAACATTCAAAAGTTTTATCGGAGGCAGTG
CGGCGCCTTCACAATACAACAACAAGCGAGCTTCCTAGTTTGCCTAAACC
ACAACATCTGGCAATTTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000036 | genome | Sc0000036:149236..151083 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL79042_cuf0 |
| Biotype | protein_coding |
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