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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL77885_cuf0 >transcript:BL77885_cuf0-protein ID=transcript:BL77885_cuf0-protein|Name=transcript:BL77885_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=428bp
GKRLVWSYDKANIEALHEHIENAPWDINYIFDSMDDIWDSWYNMFIAICK
QHILHKLISTTRTAKPWIHSNKQVREAIRRKHRLHSKAKRVNTDVAWATY
KKQRNLVTSLTRRAEAAYIEDLVNDVESGNTRRFFTYAKSALGKTTTGIP
ALQVGSVILETPDEKANALNDFFIQQTDLPARDDPTPTFQPTAIPGTVLD
SLQLSVDEVQQQLCALKIGKSCGPDNITPKLLRLVADPISGPLTQLYNKS
LLLGQVPSGWKKANVTPIHKAGNRHLTNNYRPISLLSIVSKVLETLVNKR
LTAHVNPILTDHQSGFRPLDNTTLQLARMIEEWTEAMDSGEIVGCVFLDL
RKAFDKVWHAGLLSKLRAYGISGSMHNWFSXSQLPVRETPTSGHPGSGIR
LEVSPSRRTTGFCPRTNAFHTLYQRPCL Run BLAST on NCBI mRNA from alignment at Sc0000217:8350..10753+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL77885_cuf0 ID=transcript:BL77885_cuf0|Name=transcript:BL77885_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=2404bp|location=Sequence derived from alignment at Sc0000217:8350..10753+ (Branchiostoma lanceolatum)
CGGAAAACGACTCGTGTGGTCATATGACAAAGCAAATATTGAGGCTCTTC
ATGAACACATCGAAAACGCACCTTGGGACATTAATTATATCTTTGACTCT
ATGGACGACATCTGGGATTCATGGTATAACATGTTCATTGCAATCTGCAA
ACAGCACATCCTCCACAAACTCATTTCGACTACCAGAACAGCAAAGCCAT
GGATACATTCCAACAAACAAGTCAGAGAAGCAATCCGTCGAAAACACCGT
CTCCACTCCAAAGCAAAACGGGTAAATACAGACGTAGCCTGGGCTACCTA
CAAAAAACAAAGGAACCTTGTGACCTCCCTAACAAGAAGGGCCGAGGCAG
CATATATTGAGGACCTTGTCAACGATGTGGAGAGTGGCAACACCAGGCGA
TTCTTTACGTATGCTAAATCTGCACTGGGCAAGACAACAACGGGTATCCC
AGCACTTCAAGTCGGGTCAGTTATATTAGAAACGCCAGATGAAAAGGCCA
ATGCCCTGAACGATTTCTTCATACAACAGACAGATCTTCCTGCCAGAGAC
GACCCAACCCCAACATTCCAACCTACCGCCATCCCTGGAACAGTTCTTGA
CTCACTTCAGCTGTCAGTTGATGAGGTACAACAACAACTATGTGCCCTCA
AAATCGGAAAGTCATGTGGTCCCGACAATATCACTCCCAAGCTCCTACGC
CTAGTAGCAGATCCTATATCAGGACCTCTAACTCAGCTATACAACAAGTC
CCTCCTCCTTGGACAAGTTCCTTCGGGGTGGAAAAAAGCAAACGTTACCC
CCATCCACAAAGCCGGAAACCGACACCTAACAAACAACTACAGGCCTATA
TCCCTACTTAGCATTGTATCAAAGGTTCTAGAAACCCTTGTCAACAAACG
TCTAACGGCACATGTCAATCCAATACTGACAGATCACCAAAGCGGATTCA
GACCTCTTGACAACACTACGCTACAGCTGGCTCGAATGATAGAGGAATGG
ACTGAAGCCATGGATAGCGGAGAGATAGTGGGATGCGTGTTCCTTGACCT
TCGAAAAGCATTTGACAAGGTCTGGCACGCAGGACTGCTATCCAAACTAA
GAGCGTATGGAATCAGTGGATCCATGCACAACTGGTTTTCCAGNTCCCAG
CTACCTGTCCGAGAGACGCCAACGAGTGGTCATCCAGGGAGTGGCATTAG
ACTGGAAGTCTCCCCTAGCCGGCGTACCACAGGGTTCTGTCCTCGGACCA
ACGCTTTTCATACTCTATATCAACGACCTTGCCTCTAGCTGTATACAATC
CCAACCAAATTTATTCGCCGACGACACTTCACTGTCCNGAGACAACAACG
GGTATCCCAGCACTTCAAGTCGGGTCAGTTATATTAGAAACGCCAGATGA
AAAGGCCAATGCCCTGAACGATTTCTTCATACAACAGACAGATCTTCCTG
CCAGAGACGACCCAACCCCAACATTCCAACCTACCGCCATCCCTGGAACA
GTTCTTGACTCACTTCAGCTGTCAGTTGATGAGGTACAACAACAACTATG
TGCCCTCAAAATCGGAAAGTCATGTGGTCCCGACAATATCACTCCCAAGC
TCCTACGCCTAGTAGCAGATCCTATATCAGGACCTCTAACTCAGCTGTAC
AACAAGTCCCTCCTCCTTGGACAAGTTCCTTCGGGGTGGAAAAAAGCAAA
CGTTACCCCCATCCACAAAGCCGGAAACCGACACCTAACAAACAACTACA
GGCCTATATCCCTACTTAGCATTGTATCAAAGGTTCTAGAAACCCTTGTC
AACAAACGTCTAACGGCACATGTCAATCCAATACTGACAGATCACCAAAG
CGGATTCAGACCTCTTGACAACACTACGCTACAGCTGGCTCGAATGATAG
AGGAATGGACTGAAGCCATGGATAGCGGAGAGATAGTGGGATGCGTGTTC
CTTGACCTTCGAAAAGCATTTGACAAGGTCTGGCACGCAGGACTGCTATC
CAAACTAAGAGCGTATGGAATCAGTGGATCCATGCACAACTGGTTTTCCA
GCTACCTGTCCGAGAGACGCCAACGAGTGGTCATCCAGGGAGTGGCATCA
GACTGGAAGTCTCCCCTAGCCGGCGTACCACAGGGTTCTGTCCTCGGACC
AACGCTTTTCATACTCTATATCAACGACCTTGCCTCTAGCTGTATACAAT
CCCAACCAAATTTATTCGCCGACGACACTTCACTGTCCTCCTCCCATCAC
TCTATCCAACATGTAGTTGCATCACTGAACAGAGACCTGAGCTCTGTGTC
TACCTGGCTGTCTCAATGGAAACTTGAAGCCAACATAGACAAGTGTAAAG
CTATGTTCATCACGACACGCGCCATTCCACGACCGATTCCTCCCGTGACC
CTAG Coding sequence (CDS) from alignment at Sc0000217:8350..10753+ >transcript:BL77885_cuf0 ID=transcript:BL77885_cuf0|Name=transcript:BL77885_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1287bp|location=Sequence derived from alignment at Sc0000217:8350..10753+ (Branchiostoma lanceolatum)
GGAAAACGACTCGTGTGGTCATATGACAAAGCAAATATTGAGGCTCTTCA
TGAACACATCGAAAACGCACCTTGGGACATTAATTATATCTTTGACTCTA
TGGACGACATCTGGGATTCATGGTATAACATGTTCATTGCAATCTGCAAA
CAGCACATCCTCCACAAACTCATTTCGACTACCAGAACAGCAAAGCCATG
GATACATTCCAACAAACAAGTCAGAGAAGCAATCCGTCGAAAACACCGTC
TCCACTCCAAAGCAAAACGGGTAAATACAGACGTAGCCTGGGCTACCTAC
AAAAAACAAAGGAACCTTGTGACCTCCCTAACAAGAAGGGCCGAGGCAGC
ATATATTGAGGACCTTGTCAACGATGTGGAGAGTGGCAACACCAGGCGAT
TCTTTACGTATGCTAAATCTGCACTGGGCAAGACAACAACGGGTATCCCA
GCACTTCAAGTCGGGTCAGTTATATTAGAAACGCCAGATGAAAAGGCCAA
TGCCCTGAACGATTTCTTCATACAACAGACAGATCTTCCTGCCAGAGACG
ACCCAACCCCAACATTCCAACCTACCGCCATCCCTGGAACAGTTCTTGAC
TCACTTCAGCTGTCAGTTGATGAGGTACAACAACAACTATGTGCCCTCAA
AATCGGAAAGTCATGTGGTCCCGACAATATCACTCCCAAGCTCCTACGCC
TAGTAGCAGATCCTATATCAGGACCTCTAACTCAGCTATACAACAAGTCC
CTCCTCCTTGGACAAGTTCCTTCGGGGTGGAAAAAAGCAAACGTTACCCC
CATCCACAAAGCCGGAAACCGACACCTAACAAACAACTACAGGCCTATAT
CCCTACTTAGCATTGTATCAAAGGTTCTAGAAACCCTTGTCAACAAACGT
CTAACGGCACATGTCAATCCAATACTGACAGATCACCAAAGCGGATTCAG
ACCTCTTGACAACACTACGCTACAGCTGGCTCGAATGATAGAGGAATGGA
CTGAAGCCATGGATAGCGGAGAGATAGTGGGATGCGTGTTCCTTGACCTT
CGAAAAGCATTTGACAAGGTCTGGCACGCAGGACTGCTATCCAAACTAAG
AGCGTATGGAATCAGTGGATCCATGCACAACTGGTTTTCCAGNTCCCAGC
TACCTGTCCGAGAGACGCCAACGAGTGGTCATCCAGGGAGTGGCATTAGA
CTGGAAGTCTCCCCTAGCCGGCGTACCACAGGGTTCTGTCCTCGGACCAA
CGCTTTTCATACTCTATATCAACGACCTTGCCTCTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000217 | genome | Sc0000217:8350..10753 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL77885_cuf0 |
| Biotype | protein_coding |
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