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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL77742_cuf1 >transcript:BL77742_cuf1-protein ID=transcript:BL77742_cuf1-protein|Name=transcript:BL77742_cuf1|organism=Branchiostoma lanceolatum|type=polypeptide|length=192bp
CDACMAAPGGIESTCLRCRDPVTVAAGDGCVWDCGLGFAAVRGSCKACHA
SCITCASEGLLGCTACAPGYVLAHTGMCTDRCFPGFYPDAGVCKACPPGC
LECALDAGVLQCTRCRDPYMVVQFGECSQACADQFYIDPVTRVCTECDWS
CNSCVGPTKADCVQCMGHMTLQNGTCVEECTMGYFPAGQECA Run BLAST on NCBI mRNA from alignment at Sc0000006:7300868..7303233- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL77742_cuf1 ID=transcript:BL77742_cuf1|Name=transcript:BL77742_cuf1|organism=Branchiostoma lanceolatum|type=mRNA|length=2366bp|location=Sequence derived from alignment at Sc0000006:7300868..7303233- (Branchiostoma lanceolatum)
CTGTGACGCCTGCATGGCCGCGCCCGGCGGGATAGAGAGCACGTGTCTGC
GGTGCCGCGACCCCGTCACGGTTGCCGCGGGCGATGGGTGTGTGTGGGAC
TGTGGGCTGGGCTTTGCGGCAGTCAGAGGCTCCTGCAAGGGTGAGATATT
TCACATGTATTACAGCAACATTGGTCTGGTTTAGCTCCTCTACACTGATT
TCATACAGGCACAAATTGACACCAATGTTGTGGTGAAGTTTGTACTTCAG
CTGAACTCACTTGTTTAAAGACTTTTTTTTTAAGTTGCCCTTTGGCACCA
AATTTGTGTTGGTTTCCGAGGTAGGCAGCAGGGTGAAGGTCAAGAAGATA
AAGTCAAAGAAATGTTGTTTATCTAGATAAAGATATTTGGCATCAAAGAC
ATGTCAAATTTTCAGCTTATTCAAATATAACATGACAAAAACATAACAAA
TTTATTTGTCACACGGAACCAATACCAGTACAGCCCTGAGGAAGGTAATG
GGCATATACTGGTTGTGTTTAAAAACATGTGTTTCCAGTGATTTTGTTCA
GGGATGTAACTATTTAATGTGTGTCCTCCCGCAGCCTGCCACGCGTCGTG
CATCACGTGTGCGTCGGAGGGCCTGCTGGGCTGCACCGCCTGCGCCCCGG
GCTACGTGTTAGCTCACACCGGCATGTGCACGGACAGGTGCTTCCCTGGC
TTCTACCCAGACGCAGGGGTCTGTAAAGGTGAGGATGTGTGTCCTGATGT
GTGTCCTGATGTGTGTTGCAGTATGCCCCCCAGGCTGCCTGGAGTATGTG
TGTACTGATGTGTGTTGATCTGTGTACTGATGTGTGTTCTGATGTGTGTA
TTGACGTGTGTACTTGTGTTTCAGCGTGCCCCCCTGGCTGCCTGGAGTAT
GTGTGTACTGACGTGTGTACTTGTGTTTCAGCGTGCCCCCCCGGCTGCCT
GGAGTATGTGTGTACTGACGTGTGTACTTGTGTTTCAGCGTGCCCCCCCG
GCTGCCTGGAGTATGTGTGTACTGATGTGTGTACTTGTGTTTCAGCGTGC
CCCCCCGGCTGCCTGGAGTATGTGTGTACTGATGTGTGTACTTGTGTTTC
AGCGTGCCCCCCCGGCTGCCTGGAGTATGTGTGTACTGATGTGTGTACTT
GTGTTTCAGCGTGCCCCCCCGGCTGCCTGGAGTATGTGTGTACTGATGTG
TGTACTTGTGTTTCAGCGTGCCCCCCCGGCTGCCTGGAGTATGTGTGTAC
TGATGTGTGTACTTGTGTTTCAGCGTGCCCCCCCGGCTGCCTGGAGTATG
TGTGTACTGATGTGTGTACTTGTGTTTCAGCGTGCCCCCCCGGCTGCCTG
GAGTATGTGTGTACTGATGTGTGTACTTGTGTTTCAGCGTGCCCCCCCGG
CTGCCTGGAGTATGTGTGTACTGACGTGTGTACTTGTGTTTCAGCGTGCC
CCCCCGGCTGCCTGGAGTGTGTGTTGATGTGTGTACTGACGTGTGTACTT
GTGTTTCAGCGTGCCCCCCCGGCTGCCTGGAGTGCGCCCTTGACGCGGGT
GTGCTGCAGTGCACGCGCTGCAGGGACCCTTATATGGTGGTGCAGTTCGG
AGAGTGCAGCCAGGCCTGCGCCGACCAGTTCTACATCGACCCCGTCACCA
GGGTGTGCACAGGTGAGACTGTTACCATGGTTACCAGGGTGTGCACAGGT
GAGACTGTTACCATGGTTACCAGGGTGTGCACAGGTGAGGCTGTTACCAT
GGTTACCAGGGTGTGCACAGGTGAGGCTGTTACCATGGTTACCAGGGTGT
GCACAGGTGAGACTGTTACCATGGTTACCAGGGTGTGCACAGGTGAGACT
GTTACCATGGTTACCAGGGTGTGCACAGGTGAGGCTGTTACCATTGTTAC
CAGGGTGTGCACAGGTGAGGCTGTTACCATGGTTTCTAGAGTGTACAAAA
GTGAGGCTGTTACCATGGTTACCAGGGTGTGCAAAGGTGAGGCTGTTACT
AAGGTTAATATGGTGTGTAAATGTGATACTGTTACCACGACTTGTGTGTT
GTACCTTACAGAGTGTGACTGGAGCTGTAACTCGTGCGTTGTAACCTGTG
TGTTGTAACTTGTGTGTTGTAGCTGGTGTGTTGTAACTGGTGTGCTGTAA
CTTGTGTGTTGTAACTGGAGCTGTAACTGGTGTGTTGTAACTGATGTGTT
GTAACTAGTGTGTTGTACCTTACAGAGTGTGACTGGAGCTGTAACTCGTG
CGTCGGCCCCACCAAGGCGGACTGTGTCCAGTGCATGGGTCACATGACGC
TGCAGAACGGCACCTGTGTGGAGGAGTGCACCATGGGATACTTCCCTGCC
GGCCAGGAGTGTGCCA Coding sequence (CDS) from alignment at Sc0000006:7300868..7303233- >transcript:BL77742_cuf1 ID=transcript:BL77742_cuf1|Name=transcript:BL77742_cuf1|organism=Branchiostoma lanceolatum|type=CDS|length=2304bp|location=Sequence derived from alignment at Sc0000006:7300868..7303233- (Branchiostoma lanceolatum)
TGTGACGCCTGCATGGCCGCGCCCGGCGGGATAGAGAGCACGTGTCTGCG
GTGCCGCGACCCCGTCACGGTTGCCGCGGGCGATGGGTGTGTGTGGGACT
GTGGGCTGGGCTTTGCGGCAGTCAGAGGCTCCTGCAAGGCCTGCCACGCG
TCGTGCATCACGTGTGCGTCGGAGGGCCTGCTGGGCTGCACCGCCTGCGC
CCCGGGCTACGTGTTAGCTCACACCGGCATGTGCACGGACAGGTGCTTCC
CTGGCTTCTACCCAGACGCAGGGGTCTGTAAAGCGTGCCCCCCCGGCTGC
CTGGAGTGCGCCCTTGACGCGGGTGTGCTGCAGTGCACGCGCTGCAGGGA
CCCTTATATGGTGGTGCAGTTCGGAGAGTGCAGCCAGGCCTGCGCCGACC
AGTTCTACATCGACCCCGTCACCAGGGTGTGCACAGAGTGTGACTGGAGC
TGTAACTCGTGCGTCGGCCCCACCAAGGCGGACTGTGTCCAGTGCATGGG
TCACATGACGCTGCAGAACGGCACCTGTGTGGAGGAGTGCACCATGGGAT
ACTTCCCTGCCGGCCAGGAGTGTGCCTGTGACGCCTGCATGGCCGCGCCC
GGCGGGATAGAGAGCACGTGTCTGCGGTGCCGCGACCCCGTCACGGTTGC
CGCGGGCGATGGGTGTGTGTGGGACTGTGGGCTGGGCTTTGCGGCAGTCA
GAGGCTCCTGCAAGGCCTGCCACGCGTCGTGCATCACGTGTGCGTCGGAG
GGCCTGCTGGGCTGCACCGCCTGCGCCCCGGGCTACGTGTTAGCTCACAC
CGGCATGTGCACGGACAGGTGCTTCCCTGGCTTCTACCCAGACGCAGGGG
TCTGTAAAGCGTGCCCCCCCGGCTGCCTGGAGTGCGCCCTTGACGCGGGT
GTGCTGCAGTGCACGCGCTGCAGGGACCCTTATATGGTGGTGCAGTTCGG
AGAGTGCAGCCAGGCCTGCGCCGACCAGTTCTACATCGACCCCGTCACCA
GGGTGTGCACAGAGTGTGACTGGAGCTGTAACTCGTGCGTCGGCCCCACC
AAGGCGGACTGTGTCCAGTGCATGGGTCACATGACGCTGCAGAACGGCAC
CTGTGTGGAGGAGTGCACCATGGGATACTTCCCTGCCGGCCAGGAGTGTG
CCTGTGACGCCTGCATGGCCGCGCCCGGCGGGATAGAGAGCACGTGTCTG
CGGTGCCGCGACCCCGTCACGGTTGCCGCGGGCGATGGGTGTGTGTGGGA
CTGTGGGCTGGGCTTTGCGGCAGTCAGAGGCTCCTGCAAGGCCTGCCACG
CGTCGTGCATCACGTGTGCGTCGGAGGGCCTGCTGGGCTGCACCGCCTGC
GCCCCGGGCTACGTGTTAGCTCACACCGGCATGTGCACGGACAGGTGCTT
CCCTGGCTTCTACCCAGACGCAGGGGTCTGTAAAGCGTGCCCCCCCGGCT
GCCTGGAGTGCGCCCTTGACGCGGGTGTGCTGCAGTGCACGCGCTGCAGG
GACCCTTATATGGTGGTGCAGTTCGGAGAGTGCAGCCAGGCCTGCGCCGA
CCAGTTCTACATCGACCCCGTCACCAGGGTGTGCACAGAGTGTGACTGGA
GCTGTAACTCGTGCGTCGGCCCCACCAAGGCGGACTGTGTCCAGTGCATG
GGTCACATGACGCTGCAGAACGGCACCTGTGTGGAGGAGTGCACCATGGG
ATACTTCCCTGCCGGCCAGGAGTGTGCCTGTGACGCCTGCATGGCCGCGC
CCGGCGGGATAGAGAGCACGTGTCTGCGGTGCCGCGACCCCGTCACGGTT
GCCGCGGGCGATGGGTGTGTGTGGGACTGTGGGCTGGGCTTTGCGGCAGT
CAGAGGCTCCTGCAAGGCCTGCCACGCGTCGTGCATCACGTGTGCGTCGG
AGGGCCTGCTGGGCTGCACCGCCTGCGCCCCGGGCTACGTGTTAGCTCAC
ACCGGCATGTGCACGGACAGGTGCTTCCCTGGCTTCTACCCAGACGCAGG
GGTCTGTAAAGCGTGCCCCCCCGGCTGCCTGGAGTGCGCCCTTGACGCGG
GTGTGCTGCAGTGCACGCGCTGCAGGGACCCTTATATGGTGGTGCAGTTC
GGAGAGTGCAGCCAGGCCTGCGCCGACCAGTTCTACATCGACCCCGTCAC
CAGGGTGTGCACAGAGTGTGACTGGAGCTGTAACTCGTGCGTCGGCCCCA
CCAAGGCGGACTGTGTCCAGTGCATGGGTCACATGACGCTGCAGAACGGC
ACCTGTGTGGAGGAGTGCACCATGGGATACTTCCCTGCCGGCCAGGAGTG
TGCC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000006 | genome | Sc0000006:7300868..7303233 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL77742_cuf1 |
| Biotype | protein_coding |
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