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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL77707_cuf1 >transcript:BL77707_cuf1-protein ID=transcript:BL77707_cuf1-protein|Name=transcript:BL77707_cuf1|organism=Branchiostoma lanceolatum|type=polypeptide|length=103bp
MFLKLPDPKWLYVLWGETGHVCDAAKLVVPTGKTKRDIAKVGETVVVEDL
DGRHEGTVLYSTTGDYSDASAFALAYDKKLDCKKKPKRKAAGAKRAATSA
EGN Run BLAST on NCBI mRNA from alignment at Sc0000018:677351..681126- Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL77707_cuf1 ID=transcript:BL77707_cuf1|Name=transcript:BL77707_cuf1|organism=Branchiostoma lanceolatum|type=mRNA|length=3776bp|location=Sequence derived from alignment at Sc0000018:677351..681126- (Branchiostoma lanceolatum)
TGTAAACTGCGCCTAAACAGAAACAAGACAGCAGGACTGGCGACAGCAGG
AACCCAGTGTAAAGAGAATTTGTTTTGTCATAGGCTCGAGATAAAAGTGG
TTGGAAGGAGAGGGATGGGCTGCGCCTTCCAATACTGTGCCCTAGACATA
CATGTAGCAGATAACAACCCACTATCCCTCTGGCCTCAAAAATACTATTG
GACTGCCTTTACCTTTACCTTTACATAGTACACAACAATTAACCCTACAT
TGTATACTTAGTTCTTTGCACTTTGGCTACCCAAAGCCATTTGACTACTG
TAGTAAGCTGTATTTATGGTTTTAATTTTTCATCGCTCATCAAAGTGCTG
CTAGCTTTTCATGCTACTTATTCTGTACATTGTTCTTAATTTATTTCATG
CTGAAATCTGCAGGGTTAGGTGCAAGCCTTGATGATAGACATGTATATGT
TATACATATGGCACAAATGTTAAGGGTTGGAAACTGTCCAAATGCATTGC
AGCTCATGTTAATTACCAAAAAGGTCAAACAAAATGCACTTACCGCATTC
TAAATGGTAACTCGTTAATCGCCAAATAAACTGGCCAAAGTCCGTAGTTT
GAAGACCGGAACACTTTGATTCCGTCTGTGTTCATGATGAATGAAATGTT
GCGCTGGTCCTGAAGTTCTGCGATGCTGTTGTAGATAGAGCCATCTGTTA
TATCTTCTATGGCTGAGGGGTGTTTTTTCTTTCGTTGCCTCTGTCTGATG
ATAGCTTGGTGGAAGTCTTTCCCTACGAAAACATGAAAATTGGACAAATG
ACGACAATGATTGCATATAGAATTAGATATGGGGTATAACCAAAAATACA
CAAATTTGCACTACCATATTTACAAGTTACAGACTTCTAGTTATAGGTTA
GATGTGGCATTTCTACACATATAATTTGGAAGAAATAAAAAGTATGTATA
CAACTTGAATCAATTAATTATCAAGGAAACTGAATAAAGCAAAAAAAATT
TAATTGTGTACATATATCATAAGACTTACTTTGAAACATTGCTTGGAGTT
GTGACACAATGCTCATTTCCAAGAAGTAGAATGTTGACCGTTCCGAGCTT
AAGTTGACTTCGCACTTGCTGCATACAGCATCATCAGAGGAAACCGCTGT
CAGGCAAGCTGAACAGAAGTAGTGTCTTTTAACGGGAAAAGTCACGTTCC
TTAAACTGAAAAACTTGTCAAAAAGGTGCTTGGACGTGCAGAACAGGCTG
TCGTACTGGGTGTGTAGTCCAATCAGGGTAAGGAGGTCTACCACAGCACT
TGAGGTGAGGTGGTGGGATAATATGAATGCCATAACCAGCACCATACTCT
CACCATAGCTCAACTGTGAGCCAGGATGAAGAGGCAACTTCTCCACTTCA
ACCCTGTTCCCTGACTCACGGGCATTGTTGTCCTCAGATCGAAACCAGGA
AAATGCCTTAGTGAGGGATTCCCGTTGTTCATCCAAGCATTCCCAGTCTT
CACCACAATATTCTGAGAAATCATTTTGCTCCAAAACATCTAAATTACTG
TTCTCCATGCTGTTTGCTTAGAAGTAGAAAATGTCAGACTGGGGTCTGAC
TCAGTGAAATACAAAAGGCTTAGAGCACATGGTCTGAGGTCTTAAAATCT
ATCCCATCTGAATTCTGATTAGACATGGTTGTCCCCTTTGACATATTACT
TACACTTACGGATATGACTCACTCCTTTAGGATCTGGGATTGGTTGGTCA
AACATTATGCAAATACACATGTGGCCCACATTACCTCAGCCAAAAAAGCG
GGAAATTTGTGTCAGTGTTTTGATGTCCAACTGCAGACTGCCCATTTTGG
AGATCCTGGCTTTGTGACATAAGACTCTTCTTCTTCGAGAACCTTGCATA
AGTAAATATGTCAGCAAGACTTCATTACAAGGGTAAGTTCTGACTTTGTT
ATTTGTCTTGAAAGTTCACAAGCCTGCATTGAGACTATATCATCATGTTA
TAATGACCATGTGTGTCCTTTCACGTTGCAATTGTGAACATTGGTAAATC
AAGCTCAAGTTAGTCCATACTCACTTTATACTTTCTATACTTGACTCTGG
TTTTGTGACTGTACGAAATTAAGGGGGGGGGGGGTCGTCTGGGGGGAGGA
CCTCGGAGAAAAATTTTGACCTGGGGGGAGGGCCTAGAAAAATTGTTTTG
ACCTGGGGGAAGGCCTCAAGAAAAAGATTTTAACCCAACCCTCTGTCAAC
CGGCCCTATAAATTTAGTAGAGTACCCTTAACAGTGCTTCCTCGTAATTT
TTGCATTTTTGTTGAGATAATTCACTTCAGTGCAATGTTCCTTAAACTTC
CAGATCCAAAATGGCTGTATGTGTTATGGGGGGAGACAGGCCACGTCTGT
GATGCTGCAAAACTGGTTGTTCCCACTGGGAAGACCAAGCGAGACATCGC
CAAAGTAGGGGAAACTGTCGTTGTCGAAGACCTTGATGGAAGGCATGAGG
GCACTGTGCTTTACAGTACTACAGGTTTGTGCTTATGCATGTACGTAGAT
TGCTATGGTTTTGTTATATTCATGATTACACAATAATACATTGTACAATC
ATGGCATTTCCTGTGTTTTTGAGAGGATGTATTGGCCATATACATGTATA
CCTCTGAATGTGTGGGTGGGTTCTTTCAATATCAGAAATAACAGCTTGAA
TGTTAATGACACAAGATACTTATTATTGGTAAATCAGAATATTTTCTACG
GAGTAGTGAAGAGTTGTTTGCAAAATGGTTATCATTAATTTTGGCGTTAC
AACTGCAATGATTGAAATACTCTGAATACTTTGTAAAATAATTCTTTTTT
TTTTCAGGGGATTACTCAGATGCTTCTGCCTTTGCTTTAGCTTATGACAA
GAAACTTGATTGCAAGAAGAAACCAAAGAGGGTAAGTCTGATACCAGTCC
ACATTCCTAAATGTTACACAGTAAAAATACTGAAAGTGCTCAGACAGATG
CCTGCACACAGCTAGCCGTATCAAGTTTCTAATGCTCATTCCCTTACAAA
TGGTGCATGTATAATATGCCAGTTGATTGGTCTAGCTTAGTTGATAAAGT
GAGTTGTATCTTGTTGCTTTATAGAAAGCTGCAGGTGCAAAACGAGCTGC
TACTTCTGCAGAGGGCAATAACAAGGTTTGTACTCAAATGTGACAGTATG
AAATATATCAAAGACAATGGTACATTTTCATGAGCTTGGTGATTTGTTTT
CAGTGATTGAATATACATAGGTCTAGCTTAGTTGATTAAGTGTCACTGAG
TGTTGTATCTTGTTGCTTTATAGAACGCTGCAGGTGCAAAACGAGCTGCT
ACTTCTGCAGAGGGCAATAACAAGGTTTGTACTCAAAAATGTGACAGTAT
GAAATATATCAAAGACAATGGTACATTTTCATGAGCTTGGTGATTTGTTT
TCAGTGATTGAATATACATAGGTCTAGCTTAGTTGATTAAGTGTCACTGA
GTGTTGTATCTTGTTGCTTTATAGAAAGCTGCAGGTGCAAAACGAGCTGC
TACTTCTGCAGAGGGCAATAACAAGGTTTGTACTCAAATGTGACAGTATG
AAATATATTAAAGACAATGGTACATTTTCATGCATGCATGAGCTTGGTGA
TTTGTTTTCAGTGATTGAATATACATAGGTCTAGCTTAGTTGATTAAGTG
TCACTGAGTGTTGTATCTTGTTGCTTTATAGAAAGCTGCAGGTGCAAAAC
GAGCTGCTACTTCTGCAGAGGGCAAT Coding sequence (CDS) from alignment at Sc0000018:677351..681126- >transcript:BL77707_cuf1 ID=transcript:BL77707_cuf1|Name=transcript:BL77707_cuf1|organism=Branchiostoma lanceolatum|type=CDS|length=927bp|location=Sequence derived from alignment at Sc0000018:677351..681126- (Branchiostoma lanceolatum)
ATGTTCCTTAAACTTCCAGATCCAAAATGGCTGTATGTGTTATGGGGGGA
GACAGGCCACGTCTGTGATGCTGCAAAACTGGTTGTTCCCACTGGGAAGA
CCAAGCGAGACATCGCCAAAGTAGGGGAAACTGTCGTTGTCGAAGACCTT
GATGGAAGGCATGAGGGCACTGTGCTTTACAGTACTACAGGGGATTACTC
AGATGCTTCTGCCTTTGCTTTAGCTTATGACAAGAAACTTGATTGCAAGA
AGAAACCAAAGAGGAAAGCTGCAGGTGCAAAACGAGCTGCTACTTCTGCA
GAGGGCAATATGTTCCTTAAACTTCCAGATCCAAAATGGCTGTATGTGTT
ATGGGGGGAGACAGGCCACGTCTGTGATGCTGCAAAACTGGTTGTTCCCA
CTGGGAAGACCAAGCGAGACATCGCCAAAGTAGGGGAAACTGTCGTTGTC
GAAGACCTTGATGGAAGGCATGAGGGCACTGTGCTTTACAGTACTACAGG
GGATTACTCAGATGCTTCTGCCTTTGCTTTAGCTTATGACAAGAAACTTG
ATTGCAAGAAGAAACCAAAGAGGAAAGCTGCAGGTGCAAAACGAGCTGCT
ACTTCTGCAGAGGGCAATATGTTCCTTAAACTTCCAGATCCAAAATGGCT
GTATGTGTTATGGGGGGAGACAGGCCACGTCTGTGATGCTGCAAAACTGG
TTGTTCCCACTGGGAAGACCAAGCGAGACATCGCCAAAGTAGGGGAAACT
GTCGTTGTCGAAGACCTTGATGGAAGGCATGAGGGCACTGTGCTTTACAG
TACTACAGGGGATTACTCAGATGCTTCTGCCTTTGCTTTAGCTTATGACA
AGAAACTTGATTGCAAGAAGAAACCAAAGAGGAAAGCTGCAGGTGCAAAA
CGAGCTGCTACTTCTGCAGAGGGCAAT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000018 | genome | Sc0000018:677351..681126 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL77707_cuf1 |
| Biotype | protein_coding |
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