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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL77543_cuf0 >transcript:BL77543_cuf0-protein ID=transcript:BL77543_cuf0-protein|Name=transcript:BL77543_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=210bp
MLVGSSKRIGKAPPLDLKLRGQQLEQVPTVKLLGVHMDQYLTWDDHIGHI
VKKCNTGMSQLNRIRNKLPRRLRKDLAQTLVLSHLDYCSPVWGNTTAKNT
KRLQVVQNRAARLVLGCDARTDSATMRHTLGWLPVSERIQQRSFATFRRL
VRTKMPKTQYRQLTFQSENSRYQTRAATSNSIRLPKPKTNAEKRRFLYRM
SHLWNRTIDA Run BLAST on NCBI mRNA from alignment at Sc0001674:10..3388+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL77543_cuf0 ID=transcript:BL77543_cuf0|Name=transcript:BL77543_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=3379bp|location=Sequence derived from alignment at Sc0001674:10..3388+ (Branchiostoma lanceolatum)
TATTGATTGTGAAACATGGCATTTTAGACTTTGTTCGTGGAAATGTCGCA
ATTCGTAGACTTTAAAAAATAATGATTTTTTAACGTAAATCTGGCAGGGG
CCAAAGGTGTCCCGCCATATTTGCCGGCAAATGGTTATGGGGGTGGCTGA
TGGGCTGATGGTTACGGGTTGGCTGCAAAATGTGTATTATTTAGTCCCCG
AAAAGGCCGATTCAGTGTACACTGCATGATAGACCCGATCAGTTGTGTGT
ATTTCTGGCACATCGCGTCTCAGGGAATGCCAGGATTTAGCTCCCGCAAT
CCCGTTGCGCGAAGGCCGGTATTTTGTGAGGTGTAACTGTAAATAACTAG
CTATAGATTAAAGACTGCGATTCTTCCACTCACCACTTAAGCGTTAGTAA
ACTTGGGAACACCAAGGAGGTTAACCTTCAGGTTATTGCGTGTTTTCTAT
TTATTTATTCATACATACATACATACATACATTATGTACAATCGGTTGTG
TGTATTTGTATTTGTGGCGACATCAGCGCTTTCCGTCGATTTTCGTCAGC
GACTTTCGTCCACAAACTTTCGTCCTCGTCGGGGCCCCACGGGGCCCCGG
CTTTTACACAAACCCATCCTGGTCTCATCTAAAACTTCTGGCTCTAGTTC
GTTGAAATGCAGGAGTTGACCTTCTTTTTTCACCTAAATAATCCTGACAA
ATCCAGCTTTGCAGGGGTGGTAAAGATCTGAGGTTTGAAATGTAAATACA
GGTGTTTTTAAGTGATTGTTTTCAATGGCTTAACCATGTGTTTCATTGGA
AAATACAATGAATCTTTTCCCATAATTGTAAATTGTACTGATTTTGTCGT
TACTTATATAACGGGGGGTGCCCAAATATCGGACGTTTTTTTACGCGCTG
GAACTCACGGCGCTCCATTGCTGGTTGCCAGAGAATGGTCATGTTTTAAT
GAATGAATTTTGAACACATTCATCTAAAGAACATACTTTGACAAAAAATG
TATTCATACTGTTCATGGGCCCTTAACGCTCCGCGTTACATGCGGAAGAC
GCTGTGAGACATTTTCACGAATGTACCTTCTGATTTAGTGCTACGCCAGA
TAGTGTGCCTAACTTCTTACGCTTTGGTAATTTTGCTCTCTTCGGAAGTT
GGTGATGAAGTTAGGGAAATGTAAATAAGGCTTGAAGTCTGCTATATACT
AGCTTTCTTTTGACCGGAAAATTTTGACTGTGTGCACTTCTCACGTCATG
TGAGAAGGGCTATATCTAGCAGAATGGTCTGACAACAACTTGCTCAAATT
GAACAACGGCAAAACAAAATCCATGCTAGTGGGAAGTAGCAAACGGATTG
GGAAAGCGCCACCACTAGATCTAAAGCTCAGGGGACAACAGTTGGAGCAA
GTTCCAACTGTGAAACTACTCGGAGTTCATATGGATCAGTACCTGACATG
GGACGATCACATCGGCCACATAGTGAAAAAGTGCAACACGGGCATGAGTC
AACTGAACAGAATAAGGAACAAACTACCTCGTAGGTTAAGGAAAGATCTG
GCACAAACCCTGGTACTCTCACATTTGGATTACTGCTCTCCGGTGTGGGG
AAATACAACAGCTAAAAACACCAAACGGCTACAGGTCGTGCAGAACAGGG
CAGCGAGACTAGTCCTAGGATGTGACGCCAGGACAGACAGTGCAACAATG
CGACACACCCTGGGCTGGCTACCGGTGAGCGAGAGAATCCAGCAAAGAAG
TTTTGCTACATTCCGCCGGCTAGTACGTACCAAAATGCCGAAAACCCAGT
ACCGTCAACTCACCTTTCAGTCGGAAAACAGTCGGTATCAAACAAGGGCA
GCAACATCAAACTCAATCAGACTTCCAAAACCGAAAACGAATGCAGAGAA
GAGAAGATTCCTGTACCGAATGTCACACCTCTGGAACAGGACAATTGATG
CATGAACTTGATATTCTTCTGTGAACTTTTTATCCAGTTATCCTTTGTTA
ATGTATTGTGTGGGAAATTTTTGCGTAATGTTGTATCTATGTGTATATGT
ATTTGTATTTGTTTAAGGACCACAGGAAGAATAGCTGCACATTGTAAGCT
AATTGTGGATCCCTATAAAGTCAAAGTCAAAGTTTGCATTGCTGGCATTA
TAACTGATGTTGCATCTAACACATTTCTCTAAATACACCGTTTTCGAAAA
ATGGCGAGTAAATATACCCCAGAGTTTATGTTAGCCAACGTTATATTCCT
TGCACAAAATGTATTTCGAAATTTATTGTTTGGCATACCATGCATGTTCT
GTAAATTCAGTCATTTTTAAAACCTTCCTGACCACTTTGATTTCATCATG
AACCTTTTTTTTTGGCTCAACTTTTTTTGTCACACTTACATGAATTTTGC
GATGCCCAGAAGATGTCATCCATATAATCAAATTAGAATGGCCCTTTTAA
AAAAAAGAAGAAAATAGATAACCCTTAACACCTCAACTCCTTCACGGCAG
ACTCCACTGGGCTAGAACCATTTAATTTCACACCAGGATGCTTTAATGTG
GTGGGGCGGGGTACTAAGATAGAGAATGAGATTGTAGTTGTCCCAACGTC
CTTCCAATTACGTGGGATTGACCCCTACGCTGGTTTGAGGTTTATCATGG
TGACTTTTTTACATTTTGTTATGGATGCCCTCAGGTTAGCTGACATTTGA
GTGATTAGATTCTATACAGACCTGTATTTCACGCACACTCTTTAAGCAGA
TTAAGGTTTAGAACAGATGTAAGAATGTGTAGCTAACATTGTACTTCTTT
GTTCTTTCTTTTACTTTTATGTCCAGTTTAATTAGATATACTTGCATTTG
TACAATTTGATCTTGAAACTGATTTCATACTGTTCATTTTCTATATTAGA
ATCAAATCAGTCCGCTGTTATTTTTTTCCGGTTGATTTCTTTAACTGGTC
CAGCAAGAAATACTGGTTTCATACCAATGCATCGTGCCATTAAAACCACC
ACAGACTGTTATCAAAGCTTTTTGAAAAGAACAATTTGATTTCAGGAACA
AGAATGACTTCTGGTAGTGAGTCTGGTTTCTCTGGGACTAGCTAGTCCAT
GATTGAAGACCGCCTGGAGGCATAGCAGTGGTGCCGTAATGTCTATCACC
ACTTAACTTCTGATCTGACCATTTCATACTGACTCACCCAGGTCTGCTAA
TCCACAGATTTGTAGAGATTCACTGATAAACGGTATAAGATCTATGGTCA
CCACATCTTTCTCCAAGACTTCATTTTTCTTTACTTGATACCATGGCAGC
TACAGAAAGTTTGACTAGAGCTTTGCATTTGAGAGGGATTGTTCCAGCAA
AATGGCAAACTGAAAGTAGATACTGTCTG Coding sequence (CDS) from alignment at Sc0001674:10..3388+ >transcript:BL77543_cuf0 ID=transcript:BL77543_cuf0|Name=transcript:BL77543_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=633bp|location=Sequence derived from alignment at Sc0001674:10..3388+ (Branchiostoma lanceolatum)
ATGCTAGTGGGAAGTAGCAAACGGATTGGGAAAGCGCCACCACTAGATCT
AAAGCTCAGGGGACAACAGTTGGAGCAAGTTCCAACTGTGAAACTACTCG
GAGTTCATATGGATCAGTACCTGACATGGGACGATCACATCGGCCACATA
GTGAAAAAGTGCAACACGGGCATGAGTCAACTGAACAGAATAAGGAACAA
ACTACCTCGTAGGTTAAGGAAAGATCTGGCACAAACCCTGGTACTCTCAC
ATTTGGATTACTGCTCTCCGGTGTGGGGAAATACAACAGCTAAAAACACC
AAACGGCTACAGGTCGTGCAGAACAGGGCAGCGAGACTAGTCCTAGGATG
TGACGCCAGGACAGACAGTGCAACAATGCGACACACCCTGGGCTGGCTAC
CGGTGAGCGAGAGAATCCAGCAAAGAAGTTTTGCTACATTCCGCCGGCTA
GTACGTACCAAAATGCCGAAAACCCAGTACCGTCAACTCACCTTTCAGTC
GGAAAACAGTCGGTATCAAACAAGGGCAGCAACATCAAACTCAATCAGAC
TTCCAAAACCGAAAACGAATGCAGAGAAGAGAAGATTCCTGTACCGAATG
TCACACCTCTGGAACAGGACAATTGATGCATGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| Sc0001674 | genome | Sc0001674:10..3388 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL77543_cuf0 |
| Biotype | protein_coding |
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