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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL74447_cuf2 >transcript:BL74447_cuf2-protein ID=transcript:BL74447_cuf2-protein|Name=transcript:BL74447_cuf2|organism=Branchiostoma lanceolatum|type=polypeptide|length=131bp
RDIRRSLELIQQTLSERSPAAPPQSTSGLPATPQQEMLRSFPGLYRGRGR
GRGWSRGGQGKGQVPGFQSASTAEMEVQFFLMESNRDKTPQPAAEAAYVA
AGLGPKTVTISTSMDHKQVQVYNLWHTYFTY Run BLAST on NCBI mRNA from alignment at Sc0000376:57243..61904+ Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL74447_cuf2 ID=transcript:BL74447_cuf2|Name=transcript:BL74447_cuf2|organism=Branchiostoma lanceolatum|type=mRNA|length=4662bp|location=Sequence derived from alignment at Sc0000376:57243..61904+ (Branchiostoma lanceolatum)
CGAGACATTCGCCGTTCGCTGGAGCTGATACAGCAAACCCTGAGTGAGAG
GTCGCCTGCAGCACCTCCACAGTCGACCAGTGGACTACCTGCAACTCCTC
AGCAGGAGATGCTTCGGTAAGCTTGTCACCATAAATGCAAATGTTACCGC
TTGGGTTTGGAGTTTTGAAAAAAAGTAAGTGCAAAAAGTGTAGAACCAGC
TGCTAATTAGGGACTAAAGGGTTGCTTTGTTGAGTTTGGTCAGTGTTGTG
CTTCTTAGCTTTGTAGATCGATTCAGACATAGACACTCAGCTGATGCTCT
TACGTCAATTCTGGTGTAGTGTTAGTAGTGTACAGAGTCGATGGTGGCCC
GTCTGCTCAATGCTCTGGTCGTGATGCAAGAGGAAGTCAAAGTCCGGTGC
CTCTAAGTACTTGAGGTGTGTTTGGAATAGAATTGCTGAGGAGGTTGAAC
ATGAAGATAAGGCATGAAGTCTATTAATGATGCAAAGTCTCTTGTCACTC
ACAAGGCTTCGAATTCTCTTTGAATTGATGTACTGATTGATAAAATATTT
GGTTTTACATTCAGAGGGAACATCTGGTGCGAACAATATTCCTGGGTAAC
ACTTGTACGTCTATTGTTGTACCTGACAGGGCACTAGTAGCAATAGATGA
AGGCTGACACCATCTCTCTGAGGTGGTCATTGTCAACATATATTTGTCAA
TATGTTCTTATCATTCCAACTAATCATGGGCTCAGCGTGAAAGGTCTGCT
TGTATCTCTCTCGAGGCTCAACTGAACATTCTGTCTTCTTCAATTGTTTA
AAAGCCCCAGTTAAGCATTATGCAATACCTAATTTACACTTGGCTATGAT
ACAGGTAGATAAGTGTCTGGACGTCTGACAGGAATTACCACAAGGTGAGA
ATGTCTCCACACATGAGGGTGTGAAAATAGCACATTCAGGAGAATTTTGT
TTGTTTCTTTGTTATTCCACTGCCTCCATAGGAGGCTCACTCTCTTATAT
TTGTCTTGAAAACTGTACAGCTGGTAGAAATCAAGCATTCTTTTGAGACA
AATCAACAAACAGATGAGACAGACCTACAACCTGTCAGACAACTGTCTAC
ACAGAGGGACAATGACTTGTGTAGAAAATGGAACCTTGTGGTCAATCCAG
CTCATATGACTAAATGATAATAAGTGATCTGTTTTGGGTTCCAATGTAAT
GACATTCTGAACTTCAAAGAGTAGCTGCACCAATGAGTTTGATGCATCTG
ACTTCATTTCCGTATAATGAATCTTCTTTTTGCTTGTTGCTAAGAAGCTC
ACTACAAGTCTGCCCTTATTCAGGAGCTTTCCAGGGCTTTACAGAGGCAG
AGGAAGAGGCAGAGGATGGAGTAGAGGAGGCCAGGGTAAAGGCCAGGTGC
CTGGGTTTCAGTCAGCAAGCACTGCAGAGATGGAAGTGCAGTTCTTTCTG
ATGGAGAGCAACAGGGACAAGACCCCTCAGCCTGCAGCTGAGGCGGCCTA
TGTTGCTGCTGGGCTGGGGCCCAAAACTGTTACTATAAGTACCAGTATGG
ACCATAAACAGGTGCAAGTCTATAACTTGTGGCATACTTACTTTACTTAC
TAGATAAGTAAAGATAAATAAAGCATGCAGCCAATGAAATTGAGATGCCA
ACTTATTGCATGAATTTTCATTCTCCATAGTAATTGTGGCAACCTGGCTA
GAGGTGATGGGGTCACAAAACTTACAACACTTGTACCATCTACTTTCTTG
ATATTTCAATCAGTAGTGGTCATCACAGGGTTGGACAAGTTTTTTTTAAA
TTCACTCCTATTGGTCAATGCAGGGCTCGAAATTCATTTTTGGGATTAGG
TGCACTAGTGCACCCAGCTTAAAAAAATGGGTGCACCATAAAATTTTTGG
GTGCACCACTTAAATTTAAGTAATAACCTAATAATAATAATAATACAAGT
TAGTTACAAGGTTTTAAATTCTTAAACAAGTACTGTGACAGAAATTTTTA
TTATCTTTCTAACACTGAAATGTCAAGAATATGATGCATACTAGTATACT
TGATATCTTTACATACATAAACCTAAGAAAATATTTGGGTGCACCCTGTG
CACCCAAAGAAAACAATTGGATGCACAGCTCCAATTTTGGGTGCACCTGG
GTGCACATGCACCCAGTATTTCGAGCCCTGGGCAATGACATAAACAATTA
AATTGCCCGAATTAACTTTCCCGAAATTTTCATTGTTATATGTATGTTCA
ATGTATTTTTGACGGGAGACCTGGCACATCTCCATCGTGAATTCAGCTAT
AAGAAAGGGTATGCCTCCCCAGAAGGGTCAGTATCACCCCGTCTTGTGTG
AGCACGTCGACCAATGATGATGATAATGATGATGTATTTTCACTATGGCC
TCCAGCTATGGAATTCTTTACATTCATTTTCTCAATGGATTTAGTCATGC
TAGTGCATACGTGGACCAATAATAGTATCACTAAAATCAAAACCTATGTA
AAAATCATACTTGCCCGACAGGACATACCTACTTGTCCAGGGTCAGTCAG
CTTGTCTTGGGTTTTACGTATGGATATGTCCAACCGGACAAGTGAGGTAG
GAATCCATTGTCCGAATGGCACTTTCACTTGCCCTTGACTATCAGGCTAA
GTGGACTTGTCCAACCCTGTATCTCATCCAAAATTTATTTGTGCATTCCT
CCATCAAATAAATTGTATCGACAATCACATTGTCCTATGGAAAAATGATA
AAAATGTCCACGTTGGACAAAAGACTATTTCAGTTAGTACTTGAAACATT
TACTGAGCTGTAAAATTAATAGCTTAAAGCACATCAAGTAAAGCATCTTT
GGTTGGATAATGAAGCAATGCAATATTCAGTGTCAATTTGTAAATTTCTG
TTTGCTGTTAAAGGAGCCTTTACTTGGCCCTATAAGCAGGAATGTGCAAT
AAAGGGTTGTTATGAAAAGTCGCTCTTCAAGGTGCAGAATGTATTTGATC
ATCAAAATATAGTTGAATATATACTTTATGTATGTTTTTTTTTTACATTT
CTCGGTGGAATTGAGGCTGATACAAGCATACCCCAAGCTGAGACAACTCC
CAGGAGGTTGGCTCTTAAAGAAGGTGTACCAAGGAGGAAGTGGTAGCAGA
CCCTTGATCTTTGCACCTGCAGGCCAGGACGGCTACCCTGGGAAATGGTT
CCAAAAGGCATCGAAGACAACCAAGTTTTATGTTGCTCCCATGCAGTTTG
ACTTGCCACTGGAGCCACTACCTGACACTGCTGAGGTAACATCATCAAAT
ATGCTGGTCATTTACGTCTTGTTTTTCATATATTAGCCTTAATAAAGATC
ATCACTTCAAAGGCCTTGAATGGATTTATGCAATTTTCATTGCGGTGTTA
CGGCCTTGATCTTGTAAAGAAGGTAAAAAAATCTAGGTTGTTTCGTTCAG
TTTTTTTAATACAATAGCCTTATAGGGGTTGCTCTGCTCACCCACGCGGG
GGTTCCTATCACCCTCAGCTTCGCCTATTTTTCTCTGCTTACATATTATT
TGTGTTGTATACTTAAATAAAGTTTTTAATTATATCTAAAATTCTTCAAT
TCATATGTAAATGTCATCTGAATGAAATTCAAAATTTGGAGATTCAGATG
TAACATGCATGAATGTAGTTGGCATTGGTATTTGAAAATATATAACATAA
TTATTCCCTACTAGATATTAAGCAAATTGTTGCCAAAGTGGATTTGGGTA
TGCTTTGGGTATAAACTTGGTATCTTCTATATGAAGGTTGCACACATGCT
TATGATTTTAGGATTATACTATTATGTTTTATTCTTCTTTAACTTAGAGG
ACTAAGAGGAGGATGACTTTTAGGTCTTTTTCTTAAATTTTTTTTTTAAT
ATAGGAGTTCCTTGACACCCCAAAGACAGAGTGCAAGTCATGCTCCAAGA
AAGTGCCCATACCGCTTTTGGTTGATCACCTTGCACGCTGTGAGACGGTA
TGATTAACACTACAAATCTTTTATATTGCATGTCAATGTGCCACAACTTC
TTTAAGGTACACACAGATTGTACTTCATATTGTTTGCAGCACAAAAACGC
TTCTCAAAATGTACGAATTTAGAACAACTTAAAGGGATTTGCATGCTATC
TTTACTCATAAATATATATCTCAGTTCATGTTTTGTGCACAGAGAAGTAA
TAACTATCAGTTTATAAAGATGTGATGTATGATAACATGTAGAATATCTG
GTATTCACTTCAACCCATACTCTTCTCCATCTTCTGGAAAATCTACAAGT
TTTTAATTTTGATTCCAAATGACCTGTAATTTGTACAGTTGCCAATAAGA
AAATATAAACTATTTTAGACATTATTGTGTTTAGGTTCATTTGATAATTT
TTTACAACAAAAAAGGCTATTTTTGGCCTGAAATGTGGTAAAGATGTTGC
CTTCTACATAGGCAGGTGCAAAGCGCATGTGCCCACAGGACATCATTCAC
ACCTAAGGCACAAGTCACTCTAAGATTATCAGATCTGTTATTTTTTTGCC
ATTTTCACACCAAAAAAAATGATGTTTTGGACTCCTGTCCCTTTGATTGA
ATGAAAGCGATGGAATTTGTTTCAGGGGTTGAGCTGATAGTAAATGGGGT
GATGTGGAAGAG Coding sequence (CDS) from alignment at Sc0000376:57243..61904+ >transcript:BL74447_cuf2 ID=transcript:BL74447_cuf2|Name=transcript:BL74447_cuf2|organism=Branchiostoma lanceolatum|type=CDS|length=792bp|location=Sequence derived from alignment at Sc0000376:57243..61904+ (Branchiostoma lanceolatum)
CGAGACATTCGCCGTTCGCTGGAGCTGATACAGCAAACCCTGAGTGAGAG
GTCGCCTGCAGCACCTCCACAGTCGACCAGTGGACTACCTGCAACTCCTC
AGCAGGAGATGCTTCGGAGCTTTCCAGGGCTTTACAGAGGCAGAGGAAGA
GGCAGAGGATGGAGTAGAGGAGGCCAGGGTAAAGGCCAGGTGCCTGGGTT
TCAGTCAGCAAGCACTGCAGAGATGGAAGTGCAGTTCTTTCTGATGGAGA
GCAACAGGGACAAGACCCCTCAGCCTGCAGCTGAGGCGGCCTATGTTGCT
GCTGGGCTGGGGCCCAAAACTGTTACTATAAGTACCAGTATGGACCATAA
ACAGGTGCAAGTCTATAACTTGTGGCATACTTACTTTACTTACTAGCGAG
ACATTCGCCGTTCGCTGGAGCTGATACAGCAAACCCTGAGTGAGAGGTCG
CCTGCAGCACCTCCACAGTCGACCAGTGGACTACCTGCAACTCCTCAGCA
GGAGATGCTTCGGAGCTTTCCAGGGCTTTACAGAGGCAGAGGAAGAGGCA
GAGGATGGAGTAGAGGAGGCCAGGGTAAAGGCCAGGTGCCTGGGTTTCAG
TCAGCAAGCACTGCAGAGATGGAAGTGCAGTTCTTTCTGATGGAGAGCAA
CAGGGACAAGACCCCTCAGCCTGCAGCTGAGGCGGCCTATGTTGCTGCTG
GGCTGGGGCCCAAAACTGTTACTATAAGTACCAGTATGGACCATAAACAG
GTGCAAGTCTATAACTTGTGGCATACTTACTTTACTTACTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000376 | genome | Sc0000376:57243..61904 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL74447_cuf2 |
| Biotype | protein_coding |
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