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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL74417_cuf1 >transcript:BL74417_cuf1-protein ID=transcript:BL74417_cuf1-protein|Name=transcript:BL74417_cuf1|organism=Branchiostoma lanceolatum|type=polypeptide|length=151bp
MPDRDLDSVFAGVSSPVKLRIKSSSTINFNCSRDVGKMPARGTLLWETEM
LPTDCTAFNLPPDNLKDRNAIKFEVFLANTWQIVGYCPGAKVPKLTRAIN
KGLVTETTVQRITHQYCPPAKKFMHKXKFLKNTPAKTLYFGITNTVFGVL
L Run BLAST on NCBI mRNA from alignment at Sc0000008:3439058..3441959+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL74417_cuf1 ID=transcript:BL74417_cuf1|Name=transcript:BL74417_cuf1|organism=Branchiostoma lanceolatum|type=mRNA|length=2902bp|location=Sequence derived from alignment at Sc0000008:3439058..3441959+ (Branchiostoma lanceolatum)
GCTGGTACGACCTTGGGAGGTCCCGTAAATACTTTATTTACTGTCGAACC
GGAGCTCAGTTGAGGACAATCCGGAGGTGTTGCTTTGTTGTGTAGACTCT
TTGAAGTTCCCAAGTCGGTTCTCGGGCGTTTCTTGCTTCGAATGGTGACA
AGGAGCTGCCACATAGCGGTACCGGGCGACCCACCAAAATTATGTTCGGC
GGACGTGCCTGATGCCGGACCGTGACCTCGACAGTGTGTTCGCCGGAGTG
TCATCTCCGGTGAAGCTGCGTATCAAGTCGAGTTCTACCATAAATGTAAG
GTTCACCTTATTTCGTAGATCTTTTGTGACCTCCAGCAGTTTTTGTGAAA
TAGAGACACTTGTCCAAAAATGAACAAGTTCATAGACAAAACAAAGGTTA
CGAAATTATGGGGGTGGGGGGTGGAAGAGTCATGACATGCACACCCGCGG
CTTTGTCGTTCACGTGTTTTTCATTGCGTTTGGTACAATTCCCTGTAAAA
CTCTATGGTATTTGAATTGGATTAGAAACTGTGTATCATATTTCTCCTAC
CCATTATTTAAAAATGCAAAATTATATGCTGTCAAAATTATGGTTTCATA
TCATTGTTTGGGTATTGGAAGGTTTTTATCTCCATGAAAAAAAGGNTTAT
CTCCATGAAAAAAGGCTTTTTCATGGAGATACTGTTTTGCTTGCGTTTGG
TGTTTGTGTGTATGTATGTGTCACCGGACGCTTAAAGTCGCCATAACTGT
AGAACCTGTACATGGATTGAAATGATTTTTGGTATGTGGGTGGGTGTTAG
GTGGAGAAAGGTCAAGGTCGATTTTGGGCTTCCTGGCATGTGTGACTGGA
ACTGCAATGGCGTATTTGTTAAAATCTTAAATGTAGAAGAACTGAAGAGT
GGATGGACAGATCGTCATGTTCTTTGGTACACAGGTAGGTTAGACCAAGT
TGTACACACTTAAGTGCAAACTATGCAAATGAGACCGAATTTGCATAAGT
AAGGAGGTAAATCGTTTGCATGTGTGTCGTCGGATGCTTAAAGTCAGCAT
AACTGTAGAACGTGTAGATGGATTGTAGTGATATTTGGTATGTGGGTATG
CGCTGGGAGGAGAATGGTCAAGGTCGATTTTGGGCCCCCTGGTTTGTATC
CCTGGAACTGCAATGGCCTATTTGTAGAAATGTTCTAAAGGGGTTTAACT
GAAGAGAGGAACAACAGATTTTCATGTTATTTGGTACGCAGGTAGGTTGG
ACGGAGATGTACACACTGAAGTGAAAATCATGCAAAGTTAGTGTGNTTGG
TACGTTGGTAGGTTGGATGGAGATGTACACACTGAAGTTCAAATCATGCG
AAGTTATTGTGTTTGTGTGTGTGTGCGCGTGTGTGTATGTTTGTGTCACC
GTGTTTGTATGTATGTGTCACCGGAAGCTTAAAATCAGCATAACTGAAGA
ACGTGTGGATGGATTGAAATGATATTTGGTATGTGGGTAGGTGCTGGGAG
GAGAAAGGTCAAGGTCGATTTTGGGCCCCCTGGTATGTGTCACTGGAACT
GCAATGGCGTGTTTGTAAATATTTTCAAAGGAGAATAACTGAAGAAAGGA
GCGACAGATTTTCATGTTATTTACTTGGCAGGTAGCTTAGAGAGGGCTGT
ATACAATGAAGTGCAAATTATGCAAATTGGACTTAATTTGCCTAAGTAAA
TCAATATTTGCAGTTTTGGCCATTGTAGCACTACTAACAGCTGTAACANG
CTGTCAAAATTATGGTTTCATATCATTGTTTGGGTATTGGAAGGGTTTTT
TTACTGAAGACAGGATAGTACTTTCGTTTTGAAATTATAAAAAGAATTAT
GCCAAGCTTTATAGAATGAATTTGGTATTACTCAATTCAGTATTTATCCT
GAATGTGGAGTGAATTGTGACAGAAAATGACCATTATCTATAAGTTTTCT
GGCAGTCCATATGTGATTAATTGTTTAAAGAAATATAGAAACTCCATCTT
TGCTTGAAATTAGATCAACAATGATATTTTTGGCCAGTACTAAACCATGA
TGGCTTTTCTTACAGTTCAACTGTTCCAGAGATGTTGGAAAGATGCCGGC
TCGCGGGACACTTCTATGGGAGACAGAGATGCTGCCAACAGATTGTACCG
CTTTCAATCTTCCACCTGACAATCTTAAGGATAGAAATGCCATCAAGTTT
GAAGTCTTCTTGGCAAACACTTGGCAGATTGTGGGCTACTGCCCAGGTGC
AAAAGTACCTAAACTGACCAGGGCAATAAACAAAGGTCTAGTTACTGAGA
CTACTGTACAGAGAATTACACATCAGTATTGTCCCCCTGCAAAGAAATTT
ATGCATAAAGNCAAGTTTCTGAAGAACACACCTGCAAAAACGTTGTACTT
TGGAATAACTAATACGGTGTTTGGTGTTTTACTGTAAAAAGTATAGCATG
ACAGCACCTTTTCTAGAATATCTTCAGTATGTTGTTATAAAAAAAGTTAT
ATACTTGTGATAGGATGACATCTTTAATGTGTGCACAGGAAGAAATAAAG
CCACTTTTTCTGAAGAACACATCTCCAAGAGTTTGTCCTGCTTTGACAAG
AACAAGAGATACTATAAGAAGTTAAACTACACAACAGCTTATAACATCAT
ACTACTATTACTAGTATCACTAGTATATCCAATATAGACATATGTATCTA
ACGAACCATATACTTATGAATATAACAAAGTTTATACCTCTCTCAAAGTG
CAAATTTTCTATCCTAACTTGCAACATGATGACATAAAACATCTTTAGTA
TTTACACAAGAAATACTTGCAAATAATACTTCTTTATTAAATATGACAAC
ATGGTCAATAAAATATATTACAATAATTTGACAAAAACAGCCATGGCTTG
AG Coding sequence (CDS) from alignment at Sc0000008:3439058..3441959+ >transcript:BL74417_cuf1 ID=transcript:BL74417_cuf1|Name=transcript:BL74417_cuf1|organism=Branchiostoma lanceolatum|type=CDS|length=912bp|location=Sequence derived from alignment at Sc0000008:3439058..3441959+ (Branchiostoma lanceolatum)
ATGCCGGACCGTGACCTCGACAGTGTGTTCGCCGGAGTGTCATCTCCGGT
GAAGCTGCGTATCAAGTCGAGTTCTACCATAAATTTCAACTGTTCCAGAG
ATGTTGGAAAGATGCCGGCTCGCGGGACACTTCTATGGGAGACAGAGATG
CTGCCAACAGATTGTACCGCTTTCAATCTTCCACCTGACAATCTTAAGGA
TAGAAATGCCATCAAGTTTGAAGTCTTCTTGGCAAACACTTGGCAGATTG
TGGGCTACTGCCCAGGTGCAAAAGTACCTAAACTGACCAGGGCAATAAAC
AAAGGTCTAGTTACTGAGACTACTGTACAGAGAATTACACATCAGTATTG
TCCCCCTGCAAAGAAATTTATGCATAAAGNCAAGTTTCTGAAGAACACAC
CTGCAAAAACGTTGTACTTTGGAATAACTAATACGGTGTTTGGTGTTTTA
CTGTAAATGCCGGACCGTGACCTCGACAGTGTGTTCGCCGGAGTGTCATC
TCCGGTGAAGCTGCGTATCAAGTCGAGTTCTACCATAAATTTCAACTGTT
CCAGAGATGTTGGAAAGATGCCGGCTCGCGGGACACTTCTATGGGAGACA
GAGATGCTGCCAACAGATTGTACCGCTTTCAATCTTCCACCTGACAATCT
TAAGGATAGAAATGCCATCAAGTTTGAAGTCTTCTTGGCAAACACTTGGC
AGATTGTGGGCTACTGCCCAGGTGCAAAAGTACCTAAACTGACCAGGGCA
ATAAACAAAGGTCTAGTTACTGAGACTACTGTACAGAGAATTACACATCA
GTATTGTCCCCCTGCAAAGAAATTTATGCATAAAGNCAAGTTTCTGAAGA
ACACACCTGCAAAAACGTTGTACTTTGGAATAACTAATACGGTGTTTGGT
GTTTTACTGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000008 | genome | Sc0000008:3439058..3441959 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL74417_cuf1 |
| Biotype | protein_coding |
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