transcript:BL74365_cuf0 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL74365_cuf0
Unique Nametranscript:BL74365_cuf0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL74365_cuf0

>transcript:BL74365_cuf0-protein ID=transcript:BL74365_cuf0-protein|Name=transcript:BL74365_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=161bp
SGVAGGTFYAHQGGGTNYQCLPTNPQWGRYQDGTQEYSAYMYGAEYQTYT
NVPFGSTSLNNNDVPCAVCYVPTRGSKLMIPARNTCPTDWTREYHGYLMA
ENYSSSSAKEYVCVDEQPEAIQGGQADHDGALFYPVEARCGSLPCPAYVE
GRELTCAVCTK
Run BLAST on NCBI

mRNA from alignment at Sc0000040:895569..896750+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL74365_cuf0 ID=transcript:BL74365_cuf0|Name=transcript:BL74365_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1182bp|location=Sequence derived from alignment at Sc0000040:895569..896750+ (Branchiostoma lanceolatum)
ATCAGGTGTGGCAGGAGGTACATTTTACGCCCACCAAGGCGGCGGGACCA ACTACCAGTGTCTGCCGACCAACCCACAGTGGGGAAGGTACCAGGATGGA ACACAAGAGTACTCGGCTTACATGTACGGAGCTGAGTACCAGACATACAC AAACGTCCCGTTCGGCTCCACCTCCCTTAACAATAACGACGTCCCGTGTG CCGTCTGCTACGTCCCGACCCGCGGCAGTAAGTTAATGATCCCCGCCCGT AACACCTGCCCCACCGACTGGACCCGGGAGTACCATGGCTACCTCATGGC TGAGAACTACAGCAGCTCCAGTGCTAAAGAGTACGTCTGTGTGGATGAAC AGCCTGAGGCCATACAGGGCGGACAAGCCGACCATGACGGCGCGCTGTTC TACCCCGTGGAAGCCCGCTGTGGGTCCCTGCCGTGTCCCGCCTACGTGGA AGGGAGGGAGCTTACCTGTGCCGTCTGCACCAAGTGAAATCAGTATTCAT CGACCAAATAACGTCCTATACTATGGTACTAGATCCCTATGAAATACTTG ACAACAATTACCACATATGGTATGATGACTAAATGTAGATTGACTTGTTA TCTGGAATTGTAATAGCAGAGTTCAAAATCAGATTTGATGTTTTCCAATT CCAATTTTGTCATTAGACTTCCCCTAATATACATTAGTGACAGTTGACTA TTTAGTGACCACGAAAAAAATGCTTTTGTTTATCAAGGTCATGCCACTTG AATACGTAATCTCTACTAATCAACCTGAACAGCGTTAAAGTTTGAAACTA AAAGGTTTCTGCATTTAACTGGTGTGGTGACATCCATGTACAGATGTAAC TCTCTGGTGGAACTTTTAATAGTCAGAATTAACAAGGCAGGATCAGTATT CTTATGGGCTGTATGGTTTTGCGTATGTATCAAATTTAGACGAATGGCGT TGCATTTAGGGACTGACTTGCTCAGACTTTCTATGAGACTATTGCAGACA GGAGTTTAACACTTTTTTAGTTTAAATAGTATTACTAAGTCACTTAAGTC TTGCCCTCTGGTGTAAAGAGTATTGATATGTAACTAATATATTTTACCTG TCACATGAATTACAAAGATTTTCTAGTCGTAAAAAAACGCTACATATTTA GGGTTGCTATTAAGCAATAAACATCAACAACA

Coding sequence (CDS) from alignment at Sc0000040:895569..896750+

>transcript:BL74365_cuf0 ID=transcript:BL74365_cuf0|Name=transcript:BL74365_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=486bp|location=Sequence derived from alignment at Sc0000040:895569..896750+ (Branchiostoma lanceolatum)
TCAGGTGTGGCAGGAGGTACATTTTACGCCCACCAAGGCGGCGGGACCAA
CTACCAGTGTCTGCCGACCAACCCACAGTGGGGAAGGTACCAGGATGGAA
CACAAGAGTACTCGGCTTACATGTACGGAGCTGAGTACCAGACATACACA
AACGTCCCGTTCGGCTCCACCTCCCTTAACAATAACGACGTCCCGTGTGC
CGTCTGCTACGTCCCGACCCGCGGCAGTAAGTTAATGATCCCCGCCCGTA
ACACCTGCCCCACCGACTGGACCCGGGAGTACCATGGCTACCTCATGGCT
GAGAACTACAGCAGCTCCAGTGCTAAAGAGTACGTCTGTGTGGATGAACA
GCCTGAGGCCATACAGGGCGGACAAGCCGACCATGACGGCGCGCTGTTCT
ACCCCGTGGAAGCCCGCTGTGGGTCCCTGCCGTGTCCCGCCTACGTGGAA
GGGAGGGAGCTTACCTGTGCCGTCTGCACCAAGTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL74365gene:BL74365Branchiostoma lanceolatumgene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL74365_cuf0-E1BL74365_cuf0-E1-1564476830-203395Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL74365_cuf0transcript:BL74365_cuf0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000040genomeSc0000040:895569..896750 +
Properties
Property NameValue
Transcript idBL74365_cuf0
Biotypeprotein_coding