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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL74348_cuf0 >transcript:BL74348_cuf0-protein ID=transcript:BL74348_cuf0-protein|Name=transcript:BL74348_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=366bp
KHLPSILPHIRFNLMTSDDTAAILEHPLVREDPGSSEIIRNVVEKGNSGL
KPRLGVRTEMALLLDTDAGSNELLFMNPQKEKYISCSYGANKLPDVHVTT
MTVTSDNDIYIIETDYRFYSGDENKLSLFKYNHTENVWENAGMSSMSVLW
EPGEDLSLYTEHLVEVDRILYYIAADQPESSSMMRVRKYNQDKDQWQECS
RLRLSRREVNSAAVPCGSHIYFLACNEVHRYDQSKDQWSKRTGQHIISMV
CTAVVMGTEIFCTDVYFTQTMVYNTVSDNWRKLQGWQKPGNLDVSNDSRL
FVLENQLHVLLTCRDDIHEENTYLVYVYDRSADAWRDLKATLPNKSYYAH
LPCPVARIYLPYLNGE Run BLAST on NCBI mRNA from alignment at Sc0000442:114949..116885- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL74348_cuf0 ID=transcript:BL74348_cuf0|Name=transcript:BL74348_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1937bp|location=Sequence derived from alignment at Sc0000442:114949..116885- (Branchiostoma lanceolatum)
AAAGCACCTACCCAGCATCCTCCCTCACATCCGCTTCAATCTGATGACCT
CAGATGACACGGCAGCCATCTTGGAACACCCCCTGGTCAGGGAGGATCCT
GGGAGTTCTGAGATAATCAGGAACGTGGTAGAGAAGGGGAACTCCGGCCT
GAAGCCCAGACTTGGGGTGAGGACGGAAATGGCTCTGCTACTTGATACAG
ATGCGGGGTCAGTAAATACTCCTTCTTTATTTGACCCTCTATAGGTTGGA
AATAATCCTTGCACGATGCAATTCCAAATTTTTGTTTTCCAATTTCTTAC
CAGTTGTCTCTACATTCGAAAATTGTATTGCAGTTCAGTTTTATTGAGAC
AGTTTGCGATGTATTCTATTTTATCCAGGTCAAATGAGCTTCTCTTCATG
AACCCTCAGAAAGAAAAGTACATAAGCTGCAGTTACGGTGCTAACAAGCT
CCCTGATGTACATGTCACAACCATGACAGTCACCAGTGACAACGACATCT
ACATCATAGAAACTGATTACCGGTTCTATTCAGGCGATGAGAACAAATTA
TCCCTGTTTAAGTACAACCATACAGAAAATGTTTGGGAAAATGCAGGAAT
GTCTTCAATGTCTGTGTTGTGGGAACCGGGAGAAGATTTGAGCCTCTACA
CAGAGCACCTCGTTGAAGTTGATCGGATTTTATATTATATTGCTGCTGAT
CAACCAGAAAGCAGTTCAATGATGCGGGTGAGAAAATACAACCAGGACAA
GGACCAATGGCAGGAGTGTTCACGGCTGCGACTTAGCAGACGTGAAGTCA
ACAGTGCAGCAGTGCCCTGCGGCTCACATATCTATTTCCTGGCATGTAAT
GAAGTGCATCGATACGACCAGAGCAAGGATCAGTGGAGCAAGCGGACTGG
ACAGCATATCATTTCTATGGTCTGCACAGCTGTTGTCATGGGAACAGAGA
TTTTCTGCACAGATGTGTACTTCACTCAGACCATGGTGTACAACACAGTG
TCAGACAACTGGCGGAAACTTCAAGGTTGGCAAAAGCCAGGAAACCTCGA
TGTCTCCAATGACTCCAGACTTTTCGTACTAGAGAATCAGCTGCATGTAT
TGTTAACCTGTAGAGATGACATCCATGAAGAAAATACATATCTCGTTTAT
GTGTATGACAGGTCTGCTGATGCCTGGAGAGACCTGAAGGCCACCCTGCC
TAATAAGAGCTATTATGCGCATCTTCCTTGCCCTGTTGCACGTATATATC
TACCATATCTTAACGGGGAATAGGAATACATCATTGTGCTTTTTAGTCTC
AATGTGCAGTATAATGCCATATACAGTTCAGGGTAAGACTGGTAAACGGC
ATTTTTGTTTAGATTTCGGTTTCTGTTGAATGTGTCCTCACTGGGCATCT
TGTAGTGCTAGATTTTGTACTTCCATAGAAATTTTACTGGAAGGCTTACG
TTTCATTTCTATAGATAAGGGAGTCTTCCTATTAAAAAATGGAGTAATGT
TATGTGTGTTAAACTCTAATGACAGTGATTAACCGATGTCTTTAGAGGGG
TTTCATCCTAGTTAGTTTTACTAGGATCCCATCTTCCCCCATCATCAACT
ATTTTGTGGGGTTGATGTGGGAGCCCCAGTACAGTTACTATAATGGGACC
CAGGCTAAGACATTATAGCCTATATGGGTCATTAACCGTTTTTGTTAATA
TTAAGCTACTTTGATGTTAGGCAATTCCTTCTGAGCTATGACTAATGTTT
TATTTGTTGATACGTTTACAAAGATGTTACTTGCTCTTCAAGTATCTTAT
TTGTTTTACTTACGAAGCCAAAGAATGACAAAACTACACACATTAGATTA
AAAGCAATATATCTACTTGTATATTTAGAAAAACTCATGTTTTGTATCAT
TTTTGAACAATAAATATTTGTTGATGTCAAGAAAGAT Coding sequence (CDS) from alignment at Sc0000442:114949..116885- >transcript:BL74348_cuf0 ID=transcript:BL74348_cuf0|Name=transcript:BL74348_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=2202bp|location=Sequence derived from alignment at Sc0000442:114949..116885- (Branchiostoma lanceolatum)
AAGCACCTACCCAGCATCCTCCCTCACATCCGCTTCAATCTGATGACCTC
AGATGACACGGCAGCCATCTTGGAACACCCCCTGGTCAGGGAGGATCCTG
GGAGTTCTGAGATAATCAGGAACGTGGTAGAGAAGGGGAACTCCGGCCTG
AAGCCCAGACTTGGGGTGAGGACGGAAATGGCTCTGCTACTTGATACAGA
TGCGGGGTCAAATGAGCTTCTCTTCATGAACCCTCAGAAAGAAAAGTACA
TAAGCTGCAGTTACGGTGCTAACAAGCTCCCTGATGTACATGTCACAACC
ATGACAGTCACCAGTGACAACGACATCTACATCATAGAAACTGATTACCG
GTTCTATTCAGGCGATGAGAACAAATTATCCCTGTTTAAGTACAACCATA
CAGAAAATGTTTGGGAAAATGCAGGAATGTCTTCAATGTCTGTGTTGTGG
GAACCGGGAGAAGATTTGAGCCTCTACACAGAGCACCTCGTTGAAGTTGA
TCGGATTTTATATTATATTGCTGCTGATCAACCAGAAAGCAGTTCAATGA
TGCGGGTGAGAAAATACAACCAGGACAAGGACCAATGGCAGGAGTGTTCA
CGGCTGCGACTTAGCAGACGTGAAGTCAACAGTGCAGCAGTGCCCTGCGG
CTCACATATCTATTTCCTGGCATGTAATGAAGTGCATCGATACGACCAGA
GCAAGGATCAGTGGAGCAAGCGGACTGGACAGCATATCATTTCTATGGTC
TGCACAGCTGTTGTCATGGGAACAGAGATTTTCTGCACAGATGTGTACTT
CACTCAGACCATGGTGTACAACACAGTGTCAGACAACTGGCGGAAACTTC
AAGGTTGGCAAAAGCCAGGAAACCTCGATGTCTCCAATGACTCCAGACTT
TTCGTACTAGAGAATCAGCTGCATGTATTGTTAACCTGTAGAGATGACAT
CCATGAAGAAAATACATATCTCGTTTATGTGTATGACAGGTCTGCTGATG
CCTGGAGAGACCTGAAGGCCACCCTGCCTAATAAGAGCTATTATGCGCAT
CTTCCTTGCCCTGTTGCACGTATATATCTACCATATCTTAACGGGGAATA
GAAGCACCTACCCAGCATCCTCCCTCACATCCGCTTCAATCTGATGACCT
CAGATGACACGGCAGCCATCTTGGAACACCCCCTGGTCAGGGAGGATCCT
GGGAGTTCTGAGATAATCAGGAACGTGGTAGAGAAGGGGAACTCCGGCCT
GAAGCCCAGACTTGGGGTGAGGACGGAAATGGCTCTGCTACTTGATACAG
ATGCGGGGTCAAATGAGCTTCTCTTCATGAACCCTCAGAAAGAAAAGTAC
ATAAGCTGCAGTTACGGTGCTAACAAGCTCCCTGATGTACATGTCACAAC
CATGACAGTCACCAGTGACAACGACATCTACATCATAGAAACTGATTACC
GGTTCTATTCAGGCGATGAGAACAAATTATCCCTGTTTAAGTACAACCAT
ACAGAAAATGTTTGGGAAAATGCAGGAATGTCTTCAATGTCTGTGTTGTG
GGAACCGGGAGAAGATTTGAGCCTCTACACAGAGCACCTCGTTGAAGTTG
ATCGGATTTTATATTATATTGCTGCTGATCAACCAGAAAGCAGTTCAATG
ATGCGGGTGAGAAAATACAACCAGGACAAGGACCAATGGCAGGAGTGTTC
ACGGCTGCGACTTAGCAGACGTGAAGTCAACAGTGCAGCAGTGCCCTGCG
GCTCACATATCTATTTCCTGGCATGTAATGAAGTGCATCGATACGACCAG
AGCAAGGATCAGTGGAGCAAGCGGACTGGACAGCATATCATTTCTATGGT
CTGCACAGCTGTTGTCATGGGAACAGAGATTTTCTGCACAGATGTGTACT
TCACTCAGACCATGGTGTACAACACAGTGTCAGACAACTGGCGGAAACTT
CAAGGTTGGCAAAAGCCAGGAAACCTCGATGTCTCCAATGACTCCAGACT
TTTCGTACTAGAGAATCAGCTGCATGTATTGTTAACCTGTAGAGATGACA
TCCATGAAGAAAATACATATCTCGTTTATGTGTATGACAGGTCTGCTGAT
GCCTGGAGAGACCTGAAGGCCACCCTGCCTAATAAGAGCTATTATGCGCA
TCTTCCTTGCCCTGTTGCACGTATATATCTACCATATCTTAACGGGGAAT
AG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000442 | genome | Sc0000442:114949..116885 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL74348_cuf0 |
| Biotype | protein_coding |
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