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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL74261_cuf0 >transcript:BL74261_cuf0-protein ID=transcript:BL74261_cuf0-protein|Name=transcript:BL74261_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=173bp
IGLTYVYSDERWVFEDGQVMMPSDYSDWYPGEPKGGCVGFREFGPSWDGK
DCDLQRPYICQLKQGTEVRHYTSLGCWKDATPRAIPTLEKADPKFWLVGW
LHFSRPHPIKKCYQLALSRGFTVFALQFGGQCFGSADAHNTYKKYGPSTA
CNKAGEGGKWANEVYQITGQTPQ Run BLAST on NCBI mRNA from alignment at Sc0000105:705295..707602- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL74261_cuf0 ID=transcript:BL74261_cuf0|Name=transcript:BL74261_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=2308bp|location=Sequence derived from alignment at Sc0000105:705295..707602- (Branchiostoma lanceolatum)
GGATTGGGCTGACTTACGTCTACAGCGATGAACGGTGGGTATTTGAGGAC
GGCCAAGTTATGATGCCATCCGACTATTCCGACTGGTACCCTGGAGAACC
GAAAGGCGGCTGTGTCGGATTTCGGGAGTTCGGACCCTCATGGGATGGAA
AAGATTGCGACTTGCAAAGGCCGTACATCTGTCAACTAAAACAAGGTATG
CATTTCGATACCCCTCTCTATCTAGTATAAAGTAGGATGAACGAAGTATT
TTATTGTGGCGGTCTATTAGTTGGAGATACACACTGTCCAGGCAGTTACA
TCAGGTGAAAGAACTTTGCAAAAGACCATATGATCAGCTCACAGATGTAC
CTTATGTTGCATGACTAGACTGCCATTCTCGAATAGGGCTGTTTAGCCAT
GATACCAGAAGCTTTTAGATCTTTACCATGGTCACTAGGAGGCTACATGG
TGGTCTTTACAGCTGATGATGTTGTGCACTTGCTGTGCAATATACGTAAA
CTGATTTACATTAGTAGAAACTAATTTGTTACAATTTTTTTGAAAACCTA
TAGCTACCTCCTGAAAAACAAGTGTGGAAGATTTACTTGTAGATGATAGT
AATTCCATCCTTCCTCCTACAGGAACCGAAGTGCGTCATTACACCAGCCT
GGGTTGTTGGAAGGACGCTACACCACGCGCCATTCCGACACTCGAGAAAG
CAGATCCAAAGTTTTGGTTGGTTGGTTGGCTCCACTTTTCTCGTCCCCAC
CCCATCAAAAAATGTTACCAGCTAGCGCTTTCTCGCGGGTTCACAGTGTT
TGCCCTGCAGTTTGGCGGACAGTGTTTCGGGTCTGCTGATGCCCACAACA
CCTACAAGAAGTACGGACCCTCCACAGCCTGTAACAAGGCCGGCGAAGGC
GGGAAATGGGCAAATGAGGTCTACCAGATTACAGGTCAGACTCCACAGTA
AAACGTGGGCTACTGAAGGACGACCGCTTAATCCAAATAAGTGGGACGAT
GCCTATTACTTTGAAACCTACAGGTATCTGTAAAGCTTCTTGTACTCATT
AGTAACACTTTTTTGTGATTCTAATGTTTTTTTGCCGTCAACATCAGCAG
AGACATCAACATCAACATCAGCATAGCCATCCGCCTGTTTAGAATTTTTT
AAACAAAATTTAAAGAGTCAATGCATTTAGCATGAATAATATAGAGGACA
CAAAAAACGCAATTTCATGCGTTGTTGAGGCACAGGAGGGCAAAGAAAGA
AGAAAGGGGGGCTATCAGCAGTTGCAAAGCTGGAAAGTTTGTTTACCAGA
TAGAGACGCAGTATGCTTATGTAAAAGACCCTTGTTGTAAGAGGCGCATA
GTTCCTCCAGGGACGCCGACGTAATGCTCATAACAACTATGGAGTTAACT
ATGCAAATGTGCTGAGTATGGGCTTTATAAGGGTGTTCGTTTAATCAGGT
AAGGCAAACAAAAATTTATTGGTTTATATCTGATGGGGTCTTAAACTGCA
TTTGCAGGTGAGGCGATTTTAAATCGTCTAAAACTAGTTTCCATTAATTG
GCATCTAGATCTACGCGTGTATATACATCCATTCATATGTTATAGAAAGT
TGACAATAGAGATTCAGATGACAGATGCCAAGATTTGGTCTTGAAGGAAG
AGAAGACGCTGAAGAAAGAACTAACCTTATGTTAGACAGTGCACCAAGCG
ATAAGTATTTTATTCTTATGCAGAGTTTTCCAGAGGGTTTCTTTCATGGT
TTCACCTTCTCTTTGGATACATTTCTACCTTCATTCGAGTGATTCTCATT
GTCATACATGCAGTAGTGATAATAATTTTGTATACATTAAAGTATTACCT
ACAGCATCAAACAAGGATATTGTCAGCCACTATTGTGTGTAATGATAGAC
ATTGAAATGAAATTGTATGGATTCCCAGTTTAACGTCTGTATAACTGTTA
GGGGGAATCATGTCGATTGTTTAGACGAACCACAGTGACGACAGCATACG
TGTATGTCTAAGAGCTACAACACTTGGTTATAGACAATCTAAAGAAAACG
TCTGGGACTTTTCATGAATATTTTGGCAAAAGCAGGAGCTATTGCTATAT
CTACCTTATCTATCTATCTTAGTAAGGACCGTACGTCAAGTTTTGCTACA
ATGTTAATTGCTGTGAGAAGGAAACGTTGAGGCAATAGGATGAAGAGAAT
GAAGTTGAATTGAACAACGATAAAAGGTAACTGACGCAAAGTTTATACAT
TGTTTATTTGTTTACTGTTTGTTTATTTATTCGCACTTAAAAAGTAAGTA
AGAAATAA Coding sequence (CDS) from alignment at Sc0000105:705295..707602- >transcript:BL74261_cuf0 ID=transcript:BL74261_cuf0|Name=transcript:BL74261_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1044bp|location=Sequence derived from alignment at Sc0000105:705295..707602- (Branchiostoma lanceolatum)
ATTGGGCTGACTTACGTCTACAGCGATGAACGGTGGGTATTTGAGGACGG
CCAAGTTATGATGCCATCCGACTATTCCGACTGGTACCCTGGAGAACCGA
AAGGCGGCTGTGTCGGATTTCGGGAGTTCGGACCCTCATGGGATGGAAAA
GATTGCGACTTGCAAAGGCCGTACATCTGTCAACTAAAACAAGGAACCGA
AGTGCGTCATTACACCAGCCTGGGTTGTTGGAAGGACGCTACACCACGCG
CCATTCCGACACTCGAGAAAGCAGATCCAAAGTTTTGGTTGGTTGGTTGG
CTCCACTTTTCTCGTCCCCACCCCATCAAAAAATGTTACCAGCTAGCGCT
TTCTCGCGGGTTCACAGTGTTTGCCCTGCAGTTTGGCGGACAGTGTTTCG
GGTCTGCTGATGCCCACAACACCTACAAGAAGTACGGACCCTCCACAGCC
TGTAACAAGGCCGGCGAAGGCGGGAAATGGGCAAATGAGGTCTACCAGAT
TACAGGTCAGACTCCACAGTAAATTGGGCTGACTTACGTCTACAGCGATG
AACGGTGGGTATTTGAGGACGGCCAAGTTATGATGCCATCCGACTATTCC
GACTGGTACCCTGGAGAACCGAAAGGCGGCTGTGTCGGATTTCGGGAGTT
CGGACCCTCATGGGATGGAAAAGATTGCGACTTGCAAAGGCCGTACATCT
GTCAACTAAAACAAGGAACCGAAGTGCGTCATTACACCAGCCTGGGTTGT
TGGAAGGACGCTACACCACGCGCCATTCCGACACTCGAGAAAGCAGATCC
AAAGTTTTGGTTGGTTGGTTGGCTCCACTTTTCTCGTCCCCACCCCATCA
AAAAATGTTACCAGCTAGCGCTTTCTCGCGGGTTCACAGTGTTTGCCCTG
CAGTTTGGCGGACAGTGTTTCGGGTCTGCTGATGCCCACAACACCTACAA
GAAGTACGGACCCTCCACAGCCTGTAACAAGGCCGGCGAAGGCGGGAAAT
GGGCAAATGAGGTCTACCAGATTACAGGTCAGACTCCACAGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000105 | genome | Sc0000105:705295..707602 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL74261_cuf0 |
| Biotype | protein_coding |
|
