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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL74260_cuf1 >transcript:BL74260_cuf1-protein ID=transcript:BL74260_cuf1-protein|Name=transcript:BL74260_cuf1|organism=Branchiostoma lanceolatum|type=polypeptide|length=175bp
WPWCFFKTKRDCPTGDYIRFKGFCYKSFEEKKTRDEASETCAEDGGMLAM
PKDSETNNFLPKLRKAVWGRWIGLTDADSDGQWVFEDGQALMPSNYSNWR
PEEPKSGRGARGCAGFWEAGPLWDEKDCDLRRPFICQLKHGLVLQGAQAV
GTPAWVAGGTLVTGPFRHSRGQIHA Run BLAST on NCBI mRNA from alignment at Sc0000105:717366..720849- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL74260_cuf1 ID=transcript:BL74260_cuf1|Name=transcript:BL74260_cuf1|organism=Branchiostoma lanceolatum|type=mRNA|length=3484bp|location=Sequence derived from alignment at Sc0000105:717366..720849- (Branchiostoma lanceolatum)
AATGGCCATGGTGCTTTTTTAAGACGAAGAGAGGTGGGCTTTGTTCTTAA
GGCGTTAGTAGCTTGGCAATGATCATATTCGACTCCCCTGTATGTTTTCT
CCTTTCAAACAGATGTAAAGATACGGAGCAGTCTCAATATTGTACACGTA
TTCTTGCTACACTTAGTAGGTCTATCTTTTAGTGCAGGGGTGATCCCTAT
AGCTCAACTGGAAGTAGCCACACAGTTGAGCGCCTGGTTCCAATTAGTGG
CTAAATGAGAGACCCAGATTCAATCCTGGGTCAGGATATCTAGATTGGGA
CTGCACCCGTCTTTCGGAAGGGCCTTAAAAATGGGGTCCCATGGTCGAGG
GGGTGCCTCGAGCACGTTCAAATGGAAGGGCTTGCAACCCCTCCCTGTAG
AGATATACCCAGCTATTGAAACCGCTTGCTACCCTATCTAACACTAGGCA
CAACAAGGGTCCGAGCGACGAATCCTGTAGTGCACTTCTTTCGTTCTTCA
CCTCCTCCCATAAGGCGGGCACTAAAAGAGAAAGCCTTAGAAATATAGGA
ATGCTTGAATTTTATTTCTCCTTATCCTTCTAAGGGCGTTAATGCCATTT
ATTGGCCAGACGTACGTCACATGCAGGTGCAATACTTCAAAGTTTCTGTG
TTCGTCCTTTACGCAGCATACCAGCTAAAAGCTAAAGGAGCAATGAGATT
GTCTTTTGTGGTCTGTGATGGCGTGTTTTATTTGGGACATACATTATGTA
CTGTACGTAATAGACAAATTTCACTGTGTTGAACATTTTGTTCTGTCTCT
ACAGATTGTCCAACAGGAGACTACATTCGTTTCAAGGGCTTTTGCTACAA
GAGCTTTGAAGAGAAGAAGACTCGAGATGAGGCTAGTGAGACGTGTGCGG
AAGACGGAGGGATGTTAGCCATGCCGAAGGACAGTGAGACCAACAATTTT
CTCCCCAAGCTAAGAAAAGCAGTTTGGGGCCGCTGGATTGGTCTGACCGA
CGCCGACAGCGATGGACAGTGGGTATTTGAGGACGGCCAAGCTCTGATGC
CATCCAACTATTCCAACTGGCGCCCTGAAGAACCGAAAAGCGGCCGCGGT
GCACGTGGCTGTGCCGGATTTTGGGAGGCCGGACCCTTATGGGATGAAAA
AGACTGCGACTTGCGTAGGCCGTTCATCTGTCAGCTAAAACATGGCCTAG
GTATGCATTTCGATACCCCTCTCTATGTACATGTAGTAGGATGAATGAAT
TATGTGATTGTGGTGATCTATCAGTTGGATATTCACACTGTCCATATAGT
TAAGTCAGGGGAAGCTAGACTAATGCGTAGCGCAGAAGAAAATCCGATAC
AAAAAAAAGAACTTTGCAAAAGACCAGACGATCAGCTTACAGATGTGCCT
AATGCGGCATGCCGAGACTGTCATTCTCGAATAGGACTGTTTAGCCATAC
CCGATGCTGTAGGCCGATGTCAATTAGAATTTTACCATGGTCAATACTGA
CCTATAATGAGGCTATATGGTGGTAGCCTGAGTACCAGCCAAAAAAAAAA
ACGCTTGCTAACCAAGGATAGCAAGCCATTTTTTGAGCCAGCGGTCACTA
CGGAGGCTGGCACTCAGGCTAATATGGTGGTCTTTCAATTACAGTTGATG
ATGTTGTACACTTGTTGTGCAATATGCGTGAATTGATTTACATTAGCAGA
AATGCATTTGTTACAATTTCTATGAAAACCTGTAGCTAACTCCTGAAAAA
AAAAAAAGTGTAGAAGATTTACTTGTAGATGATCCTAATGCCTCCTTCCT
CCTACAGGGAGCGCAAGCAGTCGGTACACCAGCCTGGGTTGCTGGAGGGA
CACTAGTGACCGGGCCATTCCGACACTCGAGGGGACAGATCCACGCCTAG
ATGGAAGCTACTATGACCGTCAAAACCCCACCAAAAAGTGTTACCAGGTC
GCACTTTCTCGAGGTTTTACCGTGTTTGCTGTACAAGGTGGCGGCTGGTG
TGCTGGGTCTGCTGATGGTCTCAACACCTACTTCAAGTACGGACCTTCCA
CAGCCTGTGCAGCGGACGGCGAGGGCGGGGAAAGTGCAAATGAGGTCTAC
AAGATTACACGTTAGACACGGTTAATTGTGTGGGAATGGTCAAGTAAAAA
TCCATATAGGGAACCGCCCAGAAAAATATTGCATTCTTTATAACGTTGAC
CAATGTGAACATGTTTTAATATACCATTAATAGCAGAACATACATAGTAT
GTATCATACATAGTAATACACCAATCATAGTGGTACATGCATAGTAATAA
ATCAATATGCAAACCAAGTTTTATGGGTTGTTGAGGTAGAGTAGGGAAAA
CAATGATGGGCGGTAAGTAGTGAAGCTGAAGCATTTTGTTTGTATGTAAC
TGTAACGTTACGTACTTGTGTGCTACTTTGTGTAATTCGTGACCGAAGGC
CCCACTGTATACATGTACAGCAGTGGTCACCACTTAGTTGGTCTACTAAT
ACGACAGAAATGAAATAGGAGAAGTGAAATACCTTAACAGTAGTAAACGT
ATGGAGGCAAGTCCTGTTAAAGGAGGTGTAACGTTATACTTCCTACAAAG
GAACCTGACTATTGCTCATAACAATTTATCCTGTGAAGCTTAGTAAGCAA
ACGTGAGTAAGGGCTTTACAAGAGTTTTATGCTTCATAAGGTGCGGCAAA
TGAATGTTTGTTATTTGATGTTTGATGGGGTTTTGAAATGTATTTTGCCG
GTGAAACTAGTTTCCGTTTTTTAGCACCTACATGTGCCAGTATGTATATT
TATTTTTATGTTACAGAAAGTTGACAATAGAGATTTAGACGACATGTACA
GATGACAAGATTTGGTCTTGAATGAAGAGGAGACGTAGAAAAAATGACTT
TAAGTTATACGGTGCACCAAGTGATAAGTCTTTTATTCTTATGCAGAGCT
TTCCAGAGGATTTTTTTATGGTTTCACCTTCTCCTTGGCTGCATATGTAC
CTTCACCTGAGTGATTCTCAGTGCCATACATGCATGCAATAGTCATAGTA
ACCTAGTATACAGCATAGTATTATGTACAGCACCAAGAAACAAGACATTG
TCAGCTACCGTTGTGTGTAATATTAGACTGGAATTATGATAATGTCCAGT
CTGTACAGGGGGTGATCTTTGCGATTGTTTATGCAAACCACAGTGATGAC
AATATACGTGTATGTCTAAGAGGTGTAGCACATGGTTTTAGAGTTTAGAC
AATCCAATTGAAATAAGAGGTCAAGGAAGAATTTTCATATTGTTATATGT
ACATGATATTGTATGCAAGGTCCGTACGTGCATACAAGTACTTCCTTACA
ATTTCTAATTGCTGAGTATGAAGAAAACCTGTTGCCGTGTGAGAATTTAA
CATCCAGGCAATACCTAAGACAATCAAGTTGTATTGAAGAAAAGTAAAAA
GCGATTCACACTTAGTTGACTGTTTATACATCAC Coding sequence (CDS) from alignment at Sc0000105:717366..720849- >transcript:BL74260_cuf1 ID=transcript:BL74260_cuf1|Name=transcript:BL74260_cuf1|organism=Branchiostoma lanceolatum|type=CDS|length=1584bp|location=Sequence derived from alignment at Sc0000105:717366..720849- (Branchiostoma lanceolatum)
TGGCCATGGTGCTTTTTTAAGACGAAGAGAGATTGTCCAACAGGAGACTA
CATTCGTTTCAAGGGCTTTTGCTACAAGAGCTTTGAAGAGAAGAAGACTC
GAGATGAGGCTAGTGAGACGTGTGCGGAAGACGGAGGGATGTTAGCCATG
CCGAAGGACAGTGAGACCAACAATTTTCTCCCCAAGCTAAGAAAAGCAGT
TTGGGGCCGCTGGATTGGTCTGACCGACGCCGACAGCGATGGACAGTGGG
TATTTGAGGACGGCCAAGCTCTGATGCCATCCAACTATTCCAACTGGCGC
CCTGAAGAACCGAAAAGCGGCCGCGGTGCACGTGGCTGTGCCGGATTTTG
GGAGGCCGGACCCTTATGGGATGAAAAAGACTGCGACTTGCGTAGGCCGT
TCATCTGTCAGCTAAAACATGGCCTAGTCCTACAGGGAGCGCAAGCAGTC
GGTACACCAGCCTGGGTTGCTGGAGGGACACTAGTGACCGGGCCATTCCG
ACACTCGAGGGGACAGATCCACGCCTAGTGGCCATGGTGCTTTTTTAAGA
CGAAGAGAGATTGTCCAACAGGAGACTACATTCGTTTCAAGGGCTTTTGC
TACAAGAGCTTTGAAGAGAAGAAGACTCGAGATGAGGCTAGTGAGACGTG
TGCGGAAGACGGAGGGATGTTAGCCATGCCGAAGGACAGTGAGACCAACA
ATTTTCTCCCCAAGCTAAGAAAAGCAGTTTGGGGCCGCTGGATTGGTCTG
ACCGACGCCGACAGCGATGGACAGTGGGTATTTGAGGACGGCCAAGCTCT
GATGCCATCCAACTATTCCAACTGGCGCCCTGAAGAACCGAAAAGCGGCC
GCGGTGCACGTGGCTGTGCCGGATTTTGGGAGGCCGGACCCTTATGGGAT
GAAAAAGACTGCGACTTGCGTAGGCCGTTCATCTGTCAGCTAAAACATGG
CCTAGTCCTACAGGGAGCGCAAGCAGTCGGTACACCAGCCTGGGTTGCTG
GAGGGACACTAGTGACCGGGCCATTCCGACACTCGAGGGGACAGATCCAC
GCCTAGTGGCCATGGTGCTTTTTTAAGACGAAGAGAGATTGTCCAACAGG
AGACTACATTCGTTTCAAGGGCTTTTGCTACAAGAGCTTTGAAGAGAAGA
AGACTCGAGATGAGGCTAGTGAGACGTGTGCGGAAGACGGAGGGATGTTA
GCCATGCCGAAGGACAGTGAGACCAACAATTTTCTCCCCAAGCTAAGAAA
AGCAGTTTGGGGCCGCTGGATTGGTCTGACCGACGCCGACAGCGATGGAC
AGTGGGTATTTGAGGACGGCCAAGCTCTGATGCCATCCAACTATTCCAAC
TGGCGCCCTGAAGAACCGAAAAGCGGCCGCGGTGCACGTGGCTGTGCCGG
ATTTTGGGAGGCCGGACCCTTATGGGATGAAAAAGACTGCGACTTGCGTA
GGCCGTTCATCTGTCAGCTAAAACATGGCCTAGTCCTACAGGGAGCGCAA
GCAGTCGGTACACCAGCCTGGGTTGCTGGAGGGACACTAGTGACCGGGCC
ATTCCGACACTCGAGGGGACAGATCCACGCCTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000105 | genome | Sc0000105:717366..720849 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL74260_cuf1 |
| Biotype | protein_coding |
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