|
|
Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL74058_cuf0 >transcript:BL74058_cuf0-protein ID=transcript:BL74058_cuf0-protein|Name=transcript:BL74058_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=192bp
MAVREFWAYKETHFPPNVTKETLEALPDFQIRDDDIVVASYPKAGSNWLL
GIVCKLLRSAGKTEESAESLLTGPMEMTLPTAEHAGYVTLAAKPSPRIVK
THVPISFAPRGVSKPQNQVKVLVMMRNPKDTAVSYYHFNRRLCQVAGLAE
PPAWKEYAQAFVGGKVKYGDYCDHVLGWWKMRDDPHFLFVKY Run BLAST on NCBI mRNA from alignment at Sc0000004:6823014..6824803+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL74058_cuf0 ID=transcript:BL74058_cuf0|Name=transcript:BL74058_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1790bp|location=Sequence derived from alignment at Sc0000004:6823014..6824803+ (Branchiostoma lanceolatum)
CTTAATGCAGCATACACGTGTTTTAATTTGAAGGGTCATTATGGCGGTGA
GGGAGTTCTGGGCGTACAAAGAAACACACTTTCCCCCCAACGTTACCAAG
GAAACGCTGGAGGCCTTACCGGACTTTCAAATTCGCGATGACGACATTGT
CGTGGCGAGCTACCCCAAGGCAGGTGGGCAGATTGGTAGCTTTTAATAGG
CGAATATTGACTTTTGCTCCAAGGTTTATCCGCGTCCCTCGTGAGGCTGC
GACCGCCGAGCGACTCAAGTCAAAATTTGACGAATCAGTCAATGGATTTC
AGAGAACGACTCTTTTTTTTACGTTGATGCAAATATACATCCAGGTAATA
AAATACGCCATAAATAGTTACTCAAGCAACTGGATAGAATTTTGAAACAG
TCAGACGTTTCAGACAGTATCCGCTGTCTTTCGTCAGTGACTAAGGAAAG
ATCTGACAGTACCAGGTTTTATAACAAAACTCTGAATAGATGTGTTAATG
AAGTGAACACAATTTCAGAGGGTCTTTTCAATTTTGGTCACTCAATTGAC
TTGCCCAATGGACACCAGTTACTGAATAGGTAAATTACCCTTTTCTTCAA
GGATCTAACTGGCTTCTGGGCATCGTCTGTAAGCTCCTGAGATCGGCGGG
TAAGACGGAAGAGTCTGCGGAAAGTCTGCTAACAGGGCCGATGGAGATGA
CCCTGCCGACGGCCGAGCACGCCGGTTACGTCACGCTGGCTGCCAAACCC
TCCCCTCGCATCGTGAAGACCCACGTCCCAATCAGTTTCGCACCACGAGG
GGTGTCCAAGCCGCAGAATCAGGTATGGATATCCTGAGTTTTTTCTAAAA
AAATGCCTTATCTTGTGTCATTAGTAGGGGCATGTCCCGGTGTGCGATAC
TCCAAATCCTTCTGTCTGGAGTTGGTGATTCGCTACAAATCACCCGGATA
GAGGCCTGGCGAACCTCCGTCTCGTATCAACCATACTGTAGTTAAGAGAC
CTGGCGCATCCCCGTCTTGTATTAGCCAACGAATGGTGTGTTATCCATTT
TTCGATTTGATGCGGATTTCGACCAGATGACTGCTCCTTACTTTACACTT
GCTCCGTGACCTTGTCCCCACGATAGGTAAAAGTGCTGGTGATGATGAGG
AACCCGAAGGACACCGCGGTGTCATATTACCACTTCAACAGGAGACTTTG
TCAGGTGGCGGGTCTGGCAGAACCCCCGGCCTGGAAGGAGTACGCTCAGG
CTTTTGTGGGTGGAAAAGGTATGTTATTGCTAGCTGGGCCGTCATAACGT
TCCGGTCCGGTCCGTATCATACGTTATGACATACCTGGGCCGGGATAACA
TTCAAATACGTATTTTACGGTATTGCACGGCCTTCTAAGTCGTATAGCCC
GGGCGTCCGTCTACTGATTCGAACGCTCTTCGTGTGCGCCGCTGTCGAAA
ATTTGAATAGCAGATTAGTATGTTGGAATTGATGCTGATAGAACTTTTTG
TTCGACGACACCAAATTTTCTCAACTTCTGGCGCTTTTTTCATCGAAATA
TGTGTTTTTTCCGGTGGTTATGACATAAATACAAATACAACACGGTATGT
TCCGCATTAAATTGAATAAGCTGAATATTAGTTGTTGAACACTGACAATA
AAAACAGTGTTTTGTTCATCGCCTCCTTACCTATTTTATATTCATGCCTT
TTTGCTACAGTGAAATACGGAGACTACTGTGACCACGTGTTGGGCTGGTG
GAAGATGCGGGACGACCCCCATTTTCTCTTCGTGAAGTAT Coding sequence (CDS) from alignment at Sc0000004:6823014..6824803+ >transcript:BL74058_cuf0 ID=transcript:BL74058_cuf0|Name=transcript:BL74058_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=2304bp|location=Sequence derived from alignment at Sc0000004:6823014..6824803+ (Branchiostoma lanceolatum)
ATGGCGGTGAGGGAGTTCTGGGCGTACAAAGAAACACACTTTCCCCCCAA
CGTTACCAAGGAAACGCTGGAGGCCTTACCGGACTTTCAAATTCGCGATG
ACGACATTGTCGTGGCGAGCTACCCCAAGGCAGGATCTAACTGGCTTCTG
GGCATCGTCTGTAAGCTCCTGAGATCGGCGGGTAAGACGGAAGAGTCTGC
GGAAAGTCTGCTAACAGGGCCGATGGAGATGACCCTGCCGACGGCCGAGC
ACGCCGGTTACGTCACGCTGGCTGCCAAACCCTCCCCTCGCATCGTGAAG
ACCCACGTCCCAATCAGTTTCGCACCACGAGGGGTGTCCAAGCCGCAGAA
TCAGGTAAAAGTGCTGGTGATGATGAGGAACCCGAAGGACACCGCGGTGT
CATATTACCACTTCAACAGGAGACTTTGTCAGGTGGCGGGTCTGGCAGAA
CCCCCGGCCTGGAAGGAGTACGCTCAGGCTTTTGTGGGTGGAAAAGTGAA
ATACGGAGACTACTGTGACCACGTGTTGGGCTGGTGGAAGATGCGGGACG
ACCCCCATTTTCTCTTCGTGAAGTATATGGCGGTGAGGGAGTTCTGGGCG
TACAAAGAAACACACTTTCCCCCCAACGTTACCAAGGAAACGCTGGAGGC
CTTACCGGACTTTCAAATTCGCGATGACGACATTGTCGTGGCGAGCTACC
CCAAGGCAGGATCTAACTGGCTTCTGGGCATCGTCTGTAAGCTCCTGAGA
TCGGCGGGTAAGACGGAAGAGTCTGCGGAAAGTCTGCTAACAGGGCCGAT
GGAGATGACCCTGCCGACGGCCGAGCACGCCGGTTACGTCACGCTGGCTG
CCAAACCCTCCCCTCGCATCGTGAAGACCCACGTCCCAATCAGTTTCGCA
CCACGAGGGGTGTCCAAGCCGCAGAATCAGGTAAAAGTGCTGGTGATGAT
GAGGAACCCGAAGGACACCGCGGTGTCATATTACCACTTCAACAGGAGAC
TTTGTCAGGTGGCGGGTCTGGCAGAACCCCCGGCCTGGAAGGAGTACGCT
CAGGCTTTTGTGGGTGGAAAAGTGAAATACGGAGACTACTGTGACCACGT
GTTGGGCTGGTGGAAGATGCGGGACGACCCCCATTTTCTCTTCGTGAAGT
ATATGGCGGTGAGGGAGTTCTGGGCGTACAAAGAAACACACTTTCCCCCC
AACGTTACCAAGGAAACGCTGGAGGCCTTACCGGACTTTCAAATTCGCGA
TGACGACATTGTCGTGGCGAGCTACCCCAAGGCAGGATCTAACTGGCTTC
TGGGCATCGTCTGTAAGCTCCTGAGATCGGCGGGTAAGACGGAAGAGTCT
GCGGAAAGTCTGCTAACAGGGCCGATGGAGATGACCCTGCCGACGGCCGA
GCACGCCGGTTACGTCACGCTGGCTGCCAAACCCTCCCCTCGCATCGTGA
AGACCCACGTCCCAATCAGTTTCGCACCACGAGGGGTGTCCAAGCCGCAG
AATCAGGTAAAAGTGCTGGTGATGATGAGGAACCCGAAGGACACCGCGGT
GTCATATTACCACTTCAACAGGAGACTTTGTCAGGTGGCGGGTCTGGCAG
AACCCCCGGCCTGGAAGGAGTACGCTCAGGCTTTTGTGGGTGGAAAAGTG
AAATACGGAGACTACTGTGACCACGTGTTGGGCTGGTGGAAGATGCGGGA
CGACCCCCATTTTCTCTTCGTGAAGTATATGGCGGTGAGGGAGTTCTGGG
CGTACAAAGAAACACACTTTCCCCCCAACGTTACCAAGGAAACGCTGGAG
GCCTTACCGGACTTTCAAATTCGCGATGACGACATTGTCGTGGCGAGCTA
CCCCAAGGCAGGATCTAACTGGCTTCTGGGCATCGTCTGTAAGCTCCTGA
GATCGGCGGGTAAGACGGAAGAGTCTGCGGAAAGTCTGCTAACAGGGCCG
ATGGAGATGACCCTGCCGACGGCCGAGCACGCCGGTTACGTCACGCTGGC
TGCCAAACCCTCCCCTCGCATCGTGAAGACCCACGTCCCAATCAGTTTCG
CACCACGAGGGGTGTCCAAGCCGCAGAATCAGGTAAAAGTGCTGGTGATG
ATGAGGAACCCGAAGGACACCGCGGTGTCATATTACCACTTCAACAGGAG
ACTTTGTCAGGTGGCGGGTCTGGCAGAACCCCCGGCCTGGAAGGAGTACG
CTCAGGCTTTTGTGGGTGGAAAAGTGAAATACGGAGACTACTGTGACCAC
GTGTTGGGCTGGTGGAAGATGCGGGACGACCCCCATTTTCTCTTCGTGAA
GTAT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000004 | genome | Sc0000004:6823014..6824803 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL74058_cuf0 |
| Biotype | protein_coding |
|
