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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL74012_cuf0 >transcript:BL74012_cuf0-protein ID=transcript:BL74012_cuf0-protein|Name=transcript:BL74012_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=361bp
MVSVELGFTLGYILVCLCFVAPPSEFRAAGITVQNILAGWLGSEDLHFIY
YHIKRTAATSLIHAALPLGYYVGLSIVSPHLQLWDFALAPTPAVVYFAVF
SAIFCGVVVLNYIWSRKGWEGHPIVARLKSLGGNSWRATASSINVEFRRI
DKFSSGIGGTRLYIMDSWILKTGPYNVNIAHQANVHLRVIKTENHVISHE
TGTSIQYLRIAVEQLSRGGKTFTIRLNSTEYGDLKNKLSAPIHAARDVVI
RQSLSDMFLEVFREQVSQNPHHTLPEDAPVPEPCIGCMQTQSNIKLVKHC
EEGDWGECVQCYCRPMWCLECMGKWFSSRQDQAHPERWLAGNSPCPTCRA
KFCMLDVCFIA Run BLAST on NCBI mRNA from alignment at Sc0000037:858906..861244+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL74012_cuf0 ID=transcript:BL74012_cuf0|Name=transcript:BL74012_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=2339bp|location=Sequence derived from alignment at Sc0000037:858906..861244+ (Branchiostoma lanceolatum)
GCTTATTGTAGGCTTTCACTGTTTATAGCTTTTACAGTCTCCCTCCCAAC
ATCTACTTGGATCTATACACAATATACCTGACGTCATCACTTCACGTGTG
GCGATGACGTTTACACATGCCTGCACACCAGACTGGAAAGTTTGACGTGG
TCTAAACCAAAGTTGCAGTGTTTTACCGGCAGTCTCAGAATTTGTTGTGT
CTGTGATAACCATAAGTGTTTGTACCAGGCTCTACCCATTAACAGCACAT
AGAATACGCGCACAAGTATCGTCCAGATCGCCGAGGTGAGTCGGCAGCTT
GAAGGCGGTGACAGCGGCGACTGAGCCCGAGGGAGGTCTGTGGGTCTGGT
CGGTCCTGGGCAGGATCCACCATGGTGTCTGTGGAGCTGGGGTTCACGCT
GGGGTACATCCTGGTGTGTTTGTGCTTCGTGGCACCTCCGTCAGAGTTCC
GGGCAGCTGGGATAACGGTTCAGGTAAAGTTTCTTCATATGTGCCCCCCT
CCCCACTGCCCAAAAACACGCAGTGTCAGTGTTTCCCTTATGATGGAAGG
AATCATACTAGGAAGGCATAATGTTATTATTAGACTTTGTGTTATGCAAA
CGATACATGGAATGTGATCTATTAAAAAAGAATATGTAAGTTACCTTGTT
TGCAGCGTTTATGATCAATTTTACATGCTCTGAGGACTTATGTCAATTAA
AGAACATGTCAGTTATAAGTTCAAAGTCCAAAAATCAAATGAATGACGTG
TTCCTTCTTGTTTAACATGCAGAATATCCTTGCTGGCTGGCTTGGCAGTG
AGGACCTGCACTTTATCTACTACCACATCAAGAGGACAGCAGCCACGTCC
CTCATACATGCAGCTCTGCCCCTGGGGTACTATGTAGGGCTGAGTATCGT
ATCCCCTCATCTTCAACTGTGGGACTTCGCACTGGCCCCTACTCCTGCCG
TGGTCTACTTTGCCGTTTTTAGCGCCATCTTCTGTGGAGTTGTCGTGTTG
AATTACATCTGGTCACGTAAAGGATGGGAGGGGCATCCAATAGTCGCACG
GCTGAAGAGTCTCGGAGGGAACTCCTGGAGAGCAACTGCGTCCAGCATCA
ACGTAGAGTTCCGCAGGATCGACAAGTTCTCATCGGGAATAGGAGGTACG
CGGTTGTACATCATGGATTCGTGGATCCTCAAAACTGGACCGTACAATGT
TAACATAGCGCACCAAGCGAATGTCCATCTGCGAGTGATCAAGACGGAGA
ATCACGTGATCTCGCATGAGACGGGCACCTCCATTCAGTATCTGAGAATT
GCAGTTGAACAGTTATCCCGAGGAGGAAAGACATTCACCATACGGTTAAA
CTCCACAGAATACGGCGACCTGAAGAATAAACTAAGTGCGCCGATACATG
CCGCAAGAGACGTAGTCATACGGCAGTCTTTGTCGGACATGTTCTTGGAG
GTGTTCCGCGAGCAGGTCTCCCAAAACCCCCATCACACCCTCCCAGAGGA
TGCCCCAGTCCCAGAGCCCTGTATAGGCTGTATGCAGACACAGTCTAACA
TCAAGCTAGTAAAGCATTGCGAGGAGGGTGATTGGGGAGAATGTGTGCAG
TGCTACTGTAGGCCCATGTGGTGTTTAGAGTGTATGGGGAAGTGGTTCTC
TAGTAGGCAGGACCAGGCACACCCTGAGAGGTGGTTGGCTGGAAATTCAC
CATGTCCGACATGTCGGGCTAAGTTCTGTATGCTGGATGTTTGTTTCATA
GCATGAAATAAAAAGGTCTGAGAAAATGATTCTACCATTTACTATAGATT
GCCTAAGTTCCCAGGGTCATACTTTGGCTTATACCGTAATAAGCTTGCTT
ATGAAAAGGGATCTATGGCAGTTTTGTTGTTCTATGGACTCTTCCTTTGC
ATTTTGTACATGCATTTAATAGTCAAGAATTGTTCTTGAGTTGGAAAGTT
GGAAAATTGGATTCGTGATTAGTTTATGCTAATTTAAATGATATGTAAGA
AGTAAAAGTATCCATAGGTTTGTCAGATACCCAGAATCAGGGGTGCACTC
TTAAATTCAGAAAATACAAAGGAGAAATTATGTGGAGAACAATATGCCAA
ACCAAGTATGGTACACCACAGAAATGGCACACATGTAGTCCTGGAATTTC
ATTTTTTATTTCTAGCATTACCACCCTTTTCAGTCTTGTGTTAGCTTTTG
GTAAATGAATTCAGTTTGGTATTGATTCTTTGGATCTATGCAGTTGTCAT
TTAGATGTTGTCAAGTATCCTCTTCTTATGCATGCATACTTTACTTTTGC
CATTTTATCAGGAAGTCTTAATTTATCACTCAATAAAAT Coding sequence (CDS) from alignment at Sc0000037:858906..861244+ >transcript:BL74012_cuf0 ID=transcript:BL74012_cuf0|Name=transcript:BL74012_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=2172bp|location=Sequence derived from alignment at Sc0000037:858906..861244+ (Branchiostoma lanceolatum)
ATGGTGTCTGTGGAGCTGGGGTTCACGCTGGGGTACATCCTGGTGTGTTT
GTGCTTCGTGGCACCTCCGTCAGAGTTCCGGGCAGCTGGGATAACGGTTC
AGAATATCCTTGCTGGCTGGCTTGGCAGTGAGGACCTGCACTTTATCTAC
TACCACATCAAGAGGACAGCAGCCACGTCCCTCATACATGCAGCTCTGCC
CCTGGGGTACTATGTAGGGCTGAGTATCGTATCCCCTCATCTTCAACTGT
GGGACTTCGCACTGGCCCCTACTCCTGCCGTGGTCTACTTTGCCGTTTTT
AGCGCCATCTTCTGTGGAGTTGTCGTGTTGAATTACATCTGGTCACGTAA
AGGATGGGAGGGGCATCCAATAGTCGCACGGCTGAAGAGTCTCGGAGGGA
ACTCCTGGAGAGCAACTGCGTCCAGCATCAACGTAGAGTTCCGCAGGATC
GACAAGTTCTCATCGGGAATAGGAGGTACGCGGTTGTACATCATGGATTC
GTGGATCCTCAAAACTGGACCGTACAATGTTAACATAGCGCACCAAGCGA
ATGTCCATCTGCGAGTGATCAAGACGGAGAATCACGTGATCTCGCATGAG
ACGGGCACCTCCATTCAGTATCTGAGAATTGCAGTTGAACAGTTATCCCG
AGGAGGAAAGACATTCACCATACGGTTAAACTCCACAGAATACGGCGACC
TGAAGAATAAACTAAGTGCGCCGATACATGCCGCAAGAGACGTAGTCATA
CGGCAGTCTTTGTCGGACATGTTCTTGGAGGTGTTCCGCGAGCAGGTCTC
CCAAAACCCCCATCACACCCTCCCAGAGGATGCCCCAGTCCCAGAGCCCT
GTATAGGCTGTATGCAGACACAGTCTAACATCAAGCTAGTAAAGCATTGC
GAGGAGGGTGATTGGGGAGAATGTGTGCAGTGCTACTGTAGGCCCATGTG
GTGTTTAGAGTGTATGGGGAAGTGGTTCTCTAGTAGGCAGGACCAGGCAC
ACCCTGAGAGGTGGTTGGCTGGAAATTCACCATGTCCGACATGTCGGGCT
AAGTTCTGTATGCTGGATGTTTGTTTCATAGCATGAATGGTGTCTGTGGA
GCTGGGGTTCACGCTGGGGTACATCCTGGTGTGTTTGTGCTTCGTGGCAC
CTCCGTCAGAGTTCCGGGCAGCTGGGATAACGGTTCAGAATATCCTTGCT
GGCTGGCTTGGCAGTGAGGACCTGCACTTTATCTACTACCACATCAAGAG
GACAGCAGCCACGTCCCTCATACATGCAGCTCTGCCCCTGGGGTACTATG
TAGGGCTGAGTATCGTATCCCCTCATCTTCAACTGTGGGACTTCGCACTG
GCCCCTACTCCTGCCGTGGTCTACTTTGCCGTTTTTAGCGCCATCTTCTG
TGGAGTTGTCGTGTTGAATTACATCTGGTCACGTAAAGGATGGGAGGGGC
ATCCAATAGTCGCACGGCTGAAGAGTCTCGGAGGGAACTCCTGGAGAGCA
ACTGCGTCCAGCATCAACGTAGAGTTCCGCAGGATCGACAAGTTCTCATC
GGGAATAGGAGGTACGCGGTTGTACATCATGGATTCGTGGATCCTCAAAA
CTGGACCGTACAATGTTAACATAGCGCACCAAGCGAATGTCCATCTGCGA
GTGATCAAGACGGAGAATCACGTGATCTCGCATGAGACGGGCACCTCCAT
TCAGTATCTGAGAATTGCAGTTGAACAGTTATCCCGAGGAGGAAAGACAT
TCACCATACGGTTAAACTCCACAGAATACGGCGACCTGAAGAATAAACTA
AGTGCGCCGATACATGCCGCAAGAGACGTAGTCATACGGCAGTCTTTGTC
GGACATGTTCTTGGAGGTGTTCCGCGAGCAGGTCTCCCAAAACCCCCATC
ACACCCTCCCAGAGGATGCCCCAGTCCCAGAGCCCTGTATAGGCTGTATG
CAGACACAGTCTAACATCAAGCTAGTAAAGCATTGCGAGGAGGGTGATTG
GGGAGAATGTGTGCAGTGCTACTGTAGGCCCATGTGGTGTTTAGAGTGTA
TGGGGAAGTGGTTCTCTAGTAGGCAGGACCAGGCACACCCTGAGAGGTGG
TTGGCTGGAAATTCACCATGTCCGACATGTCGGGCTAAGTTCTGTATGCT
GGATGTTTGTTTCATAGCATGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000037 | genome | Sc0000037:858906..861244 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL74012_cuf0 |
| Biotype | protein_coding |
|
