transcript:BL74007_cuf0 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL74007_cuf0
Unique Nametranscript:BL74007_cuf0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Full-screen view
Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL74007_cuf0

>transcript:BL74007_cuf0-protein ID=transcript:BL74007_cuf0-protein|Name=transcript:BL74007_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=139bp
MATTAHPVPNGTTVAAITVWILVLLTTPVVPCPEPCSCSGTDVECYNSGL
TTIPDNIPNTTTLLDLYGNAIQTIRNNAFIGLSNLRDIDLDNNLLTTLTN
YTFSGLSNLRNLDIRNNFIRKIPDGTFHSLSNLEYIYLD
Run BLAST on NCBI

mRNA from alignment at Sc0000037:744481..744921+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL74007_cuf0 ID=transcript:BL74007_cuf0|Name=transcript:BL74007_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=441bp|location=Sequence derived from alignment at Sc0000037:744481..744921+ (Branchiostoma lanceolatum)
GTTGCAGGATTGAGGACCTACGATGGCGACGACTGCACACCCAGTCCCAA
ACGGGACAACTGTGGCCGCGATTACCGTGTGGATCCTCGTGCTGCTGACC
ACCCCCGTCGTGCCGTGTCCGGAGCCGTGTTCATGTTCTGGTACAGATGT
TGAGTGCTACAACAGTGGACTCACAACCATTCCAGACAACATACCCAATA
CTACAACATTGCTAGACCTGTACGGCAATGCTATACAAACCATCCGGAAT
AACGCTTTTATTGGTCTGTCAAATCTGAGGGATATCGATTTAGATAACAA
CCTCTTAACTACCCTCACCAATTATACATTCTCCGGGTTGTCCAATCTTC
GGAACTTGGACATTCGTAATAATTTCATCAGAAAAATTCCCGATGGCACT
TTTCATAGTCTATCTAATCTTGAATATATATATCTCGACCG

Coding sequence (CDS) from alignment at Sc0000037:744481..744921+

>transcript:BL74007_cuf0 ID=transcript:BL74007_cuf0|Name=transcript:BL74007_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=417bp|location=Sequence derived from alignment at Sc0000037:744481..744921+ (Branchiostoma lanceolatum)
ATGGCGACGACTGCACACCCAGTCCCAAACGGGACAACTGTGGCCGCGAT
TACCGTGTGGATCCTCGTGCTGCTGACCACCCCCGTCGTGCCGTGTCCGG
AGCCGTGTTCATGTTCTGGTACAGATGTTGAGTGCTACAACAGTGGACTC
ACAACCATTCCAGACAACATACCCAATACTACAACATTGCTAGACCTGTA
CGGCAATGCTATACAAACCATCCGGAATAACGCTTTTATTGGTCTGTCAA
ATCTGAGGGATATCGATTTAGATAACAACCTCTTAACTACCCTCACCAAT
TATACATTCTCCGGGTTGTCCAATCTTCGGAACTTGGACATTCGTAATAA
TTTCATCAGAAAAATTCCCGATGGCACTTTTCATAGTCTATCTAATCTTG
AATATATATATCTCGAC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL74007gene:BL74007Branchiostoma lanceolatumgene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL74007_cuf0-E1BL74007_cuf0-E1-1564476830-194715Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL74007_cuf0transcript:BL74007_cuf0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000037genomeSc0000037:744481..744921 +
Properties
Property NameValue
Transcript idBL74007_cuf0
Biotypeprotein_coding