|
|
Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL73980_cuf0 >transcript:BL73980_cuf0-protein ID=transcript:BL73980_cuf0-protein|Name=transcript:BL73980_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=209bp
IMEYLPASLVLLKRRMCWALYDILYNTARLPKQSKYKLQANITQTMEEKF
KKHNYADVMLYNHFEELFLKQIEQEGADFSDEVKHFERVNDQVSRFCAAN
NKMKWKDRKETLIEKSKWNDAFVVDKFFCLRLHFERIHWDYILWSRYKMR
PTRKQKRNRIGMYCGSAIERPKLNESIRMVKKYAMVNIKCGRAINNEQNK
MKICTMGNR Run BLAST on NCBI mRNA from alignment at xfSc0002993:1..1166+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL73980_cuf0 ID=transcript:BL73980_cuf0|Name=transcript:BL73980_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1166bp|location=Sequence derived from alignment at xfSc0002993:1..1166+ (Branchiostoma lanceolatum)
TGATCATGGAATATCTGCCTGCGTCCTTAGTTCTGCTGAAGCGACGCATG
TGCTGGGCGCTCTACGACATTCTCTACAACACAGCGCGTCTACCGAAGCA
GTCAAAGTATAAACTTCAAGCAAACATCACTCAAACGATGGAAGAAAAAT
TCAAGAAGCACAACTATGCTGATGTCATGCTTTACAATCATTTCGAGGAA
CTGTTTCTCAAGCAAATCGAGCAAGAAGGCGCTGACTTTTCAGACGAGGT
GAAACATTTTGAACGCGTCAACGACCAAGTTTCCCGTTTCTGCGCTGCGA
ACAACAAAATGAAATGGAAGGATCGGAAGGAAACGCTCATCGAAAAAAGC
AAATGGAACGACGCCTTCGTTGTTGACAAATTCTTTTGTTTGCGACTTCA
CTTCGAAAGAATACATTGGGATTACATATTGTGGTCAAGATATAAAATGC
GGCCGACAAGGAAGCAAAAAAGAAATAGAATTGGAATGTACTGTGGCTCA
GCGATAGAACGGCCAAAATTAAATGAGTCTATCAGAATGGTGAAAAAGTA
TGCCATGGTCAATATCAAGTGCGGCCGAGCAATAAACAATGAACAAAACA
AAATGAAAATATGTACTATGGGTAACCGGTAAAACAGTTAAGTAAATATA
ATATCAAAATGGTAAAAACGTATTTACGCGAGTGAGAAAGTTGTAAAAGA
GCTTCATAATTTGTGCATTTAAGTTTAACATAAACTTGTAACGTTACTTC
TACATGTTGGGTCAGGCATAAAGCAGAGATCATGGGTTGGCAAACCGCCA
TGTTCCGGTGTTTTTATTTATTCACTGTTTACATTGGGAGATAAGCTTTC
ACTCGAGACGTCATAGTGATTCTTATATTACAGCTTTTTAACTAGCCTGA
TGAAAATGTAATTCTGTTAGAGAGAAATTACAACAATGGAGCCACGATAA
GTGTGTGGTCTAACTGAATTGCCGACACCCTGTTACAATGATTAAGAGGC
AGAGACCAGCTTGATTCAGTTCCCGAGGAAACAGAAAAGGGGAGGGTGAC
TAACCTCAAACGTTGTTATACTTCCTTTCTATATGAAGTCGCTCAAAATT
CGTTGTGAGAGAATTCGTAACAAGCGAATAAGTGAAGGAAACAACCTCAA
TATTGGTAAGAGAATG Coding sequence (CDS) from alignment at xfSc0002993:1..1166+ >transcript:BL73980_cuf0 ID=transcript:BL73980_cuf0|Name=transcript:BL73980_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=630bp|location=Sequence derived from alignment at xfSc0002993:1..1166+ (Branchiostoma lanceolatum)
ATCATGGAATATCTGCCTGCGTCCTTAGTTCTGCTGAAGCGACGCATGTG
CTGGGCGCTCTACGACATTCTCTACAACACAGCGCGTCTACCGAAGCAGT
CAAAGTATAAACTTCAAGCAAACATCACTCAAACGATGGAAGAAAAATTC
AAGAAGCACAACTATGCTGATGTCATGCTTTACAATCATTTCGAGGAACT
GTTTCTCAAGCAAATCGAGCAAGAAGGCGCTGACTTTTCAGACGAGGTGA
AACATTTTGAACGCGTCAACGACCAAGTTTCCCGTTTCTGCGCTGCGAAC
AACAAAATGAAATGGAAGGATCGGAAGGAAACGCTCATCGAAAAAAGCAA
ATGGAACGACGCCTTCGTTGTTGACAAATTCTTTTGTTTGCGACTTCACT
TCGAAAGAATACATTGGGATTACATATTGTGGTCAAGATATAAAATGCGG
CCGACAAGGAAGCAAAAAAGAAATAGAATTGGAATGTACTGTGGCTCAGC
GATAGAACGGCCAAAATTAAATGAGTCTATCAGAATGGTGAAAAAGTATG
CCATGGTCAATATCAAGTGCGGCCGAGCAATAAACAATGAACAAAACAAA
ATGAAAATATGTACTATGGGTAACCGGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| xfSc0002993 | genome | xfSc0002993:1..1166 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL73980_cuf0 |
| Biotype | protein_coding |
|
