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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL73895_cuf0 >transcript:BL73895_cuf0-protein ID=transcript:BL73895_cuf0-protein|Name=transcript:BL73895_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=389bp
MPNTMKRMLVLLLIISGGTRPTAACSSSCSWYCDCRNRGLTSVPQDLPAT ITYLHLGHNDITSIGQSDFSRYNSLTNLVLHFNQISVINSKAFYNLTRLF PDLSLSNNQLRSLHADTFVGLDNTKSLSLSNNNIHSIEAGTFNTTPQVQY LNLNNNQLTRIRADMMAGLDNLQTLNLGNNNIHSIEEGTFSTTPQLQTLS LGYNKISTIASGTFANLPVLQYLYLSHNNINTFPIEALSNLNIPELSRLN LSYNQMETLPQLAYDILDSISTLYIDNNPWQCDCRMLPFKQKMTGYSDFE KQIRCTGPDHRVEGKSLLIAVYPEDLNCEEPASFSLPVFLSALGGVVVGI LLALSVFLIIWSRNRKLRTISTPKSVPVASPDVPGSNRD Run BLAST on NCBI mRNA from alignment at Sc0000003:601475..603495- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL73895_cuf0 ID=transcript:BL73895_cuf0|Name=transcript:BL73895_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=2021bp|location=Sequence derived from alignment at Sc0000003:601475..603495- (Branchiostoma lanceolatum) ACTAGTCATCGCTTGAGTTGAAGTGCTATGTTAAGTTTTATTCAGTTTTT
GGAAACAACAGACCGTGGATACGGAAAAAGCACTGTTAAACGATTGTACC
TGTGATTCCTGATAAGACTGTGCTCAATAACTCGGGTTATAAAACGTTAG
ATGATGTTGGCTATTAAAAGACGGATCAGACATAGTTGGCTAACCAATGA
AAAAGAAGGATGGACCTTGTCTATAATCTATGATACTATACGGCTGTGTT
TACTTTCTATTGTACAGACAAAATGCCCAACACGATGAAGAGGATGCTGG
TTCTTCTGCTGATCATCTCGGGGGGAACCAGACCGACCGCAGCCTGCAGC
AGCAGCTGTTCGTGGTACTGTGACTGCCGCAATAGAGGCCTCACAAGTGT
CCCTCAAGACCTGCCTGCAACCATCACTTACCTTCACCTGGGTCACAACG
ATATCACAAGCATAGGCCAGTCCGACTTCTCCAGGTACAACAGCCTGACC
AACTTAGTTCTTCATTTCAACCAGATCTCTGTAATCAACAGCAAAGCGTT
CTACAACTTAACCAGGTTATTTCCTGATCTGTCTCTTTCAAATAACCAGT
TAAGGAGTCTCCATGCTGACACATTTGTGGGACTTGATAACACAAAGAGC
CTTAGTCTGTCCAACAACAACATCCACAGTATCGAGGCAGGAACCTTTAA
TACCACGCCGCAGGTTCAGTATCTGAACCTCAACAATAACCAGTTAACCA
GAATCAGAGCTGACATGATGGCGGGACTTGATAACCTACAGACCCTTAAC
TTGGGAAACAACAACATCCACAGTATAGAGGAAGGAACCTTCAGTACCAC
CCCGCAGCTCCAAACTCTTAGTCTTGGATATAACAAAATCAGCACCATCG
CATCTGGTACATTTGCAAACTTGCCAGTTCTCCAATACTTGTACCTATCT
CACAACAACATCAACACTTTCCCCATCGAGGCCTTGTCAAATCTGAATAT
TCCAGAATTGTCGAGGCTTAATTTATCCTACAACCAGATGGAGACTCTTC
CCCAATTGGCATATGACATACTGGACTCTATCTCAACTTTGTACATTGAC
AACAATCCCTGGCAGTGTGACTGTAGGATGCTTCCCTTTAAGCAGAAGAT
GACAGGTTATTCAGATTTTGAAAAACAGATCCGATGTACCGGACCTGATC
ACCGTGTTGAAGGAAAAAGTTTGTTAATAGCTGTCTACCCCGAGGATCTG
AACTGTGAAGAGCCAGCTTCATTTTCCCTGCCAGTGTTTCTCAGTGCGCT
AGGGGGCGTGGTAGTCGGTATCCTCCTCGCCCTGTCCGTTTTCCTTATAA
TATGGAGCAGAAACAGGAAGTTAAGAACCATTTCTACTCCTAAATCCGTG
CCTGTCGCTTCCCCAGACGTACCAGGCAGTAACCGTGACTAGACAGGAAC
TGACGTCACGAGAACAGGTGCAGCAGAGTCTGATGACGTCATCAATGGTA
TCAAGGATACTAAAAATAATAGAGATGATAATTGCAATGATGATAATAAG
AAGAAGAAGCAACTTGTACTTGAAACTCTGCTTAAAATCATCATAATAAT
AACAATGGTATAATGATGAAAATAGATACAAAAGTTTGTGATATCTTAAG
ATTAAAACGTGAAAGAACGGAATCGCCATCCCTGCCCAAACTTTAGTTTG
CTGATGTATTAACATGTTCCAGTGACTACATTGTAGGGCCAGCTCTTATA
GTACAATAATACGAACATTGAAGTGTGTTAGCTATTCGTTTGATTGCAGG
GATGTTTGCTGTGTGACACTGACGTATATTCAGTCGTATCATCGCGTGGA
ATGGTGTATGTAGCGTTTCCTGTAACTGCAGTTCATTCACAGAGAAAATC
CTCCGACCCCAAACACACGTCATATACTAGTAGTGTCACGTTATACTGGG
GATCCACTGACAGGGAAAATCCCTGACTGGTTGGAAATTCCACTGGCACA
ATACGTGTAGGAAGACTCGAC Coding sequence (CDS) from alignment at Sc0000003:601475..603495- >transcript:BL73895_cuf0 ID=transcript:BL73895_cuf0|Name=transcript:BL73895_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1170bp|location=Sequence derived from alignment at Sc0000003:601475..603495- (Branchiostoma lanceolatum) ATGCCCAACACGATGAAGAGGATGCTGGTTCTTCTGCTGATCATCTCGGG GGGAACCAGACCGACCGCAGCCTGCAGCAGCAGCTGTTCGTGGTACTGTG ACTGCCGCAATAGAGGCCTCACAAGTGTCCCTCAAGACCTGCCTGCAACC ATCACTTACCTTCACCTGGGTCACAACGATATCACAAGCATAGGCCAGTC CGACTTCTCCAGGTACAACAGCCTGACCAACTTAGTTCTTCATTTCAACC AGATCTCTGTAATCAACAGCAAAGCGTTCTACAACTTAACCAGGTTATTT CCTGATCTGTCTCTTTCAAATAACCAGTTAAGGAGTCTCCATGCTGACAC ATTTGTGGGACTTGATAACACAAAGAGCCTTAGTCTGTCCAACAACAACA TCCACAGTATCGAGGCAGGAACCTTTAATACCACGCCGCAGGTTCAGTAT CTGAACCTCAACAATAACCAGTTAACCAGAATCAGAGCTGACATGATGGC GGGACTTGATAACCTACAGACCCTTAACTTGGGAAACAACAACATCCACA GTATAGAGGAAGGAACCTTCAGTACCACCCCGCAGCTCCAAACTCTTAGT CTTGGATATAACAAAATCAGCACCATCGCATCTGGTACATTTGCAAACTT GCCAGTTCTCCAATACTTGTACCTATCTCACAACAACATCAACACTTTCC CCATCGAGGCCTTGTCAAATCTGAATATTCCAGAATTGTCGAGGCTTAAT TTATCCTACAACCAGATGGAGACTCTTCCCCAATTGGCATATGACATACT GGACTCTATCTCAACTTTGTACATTGACAACAATCCCTGGCAGTGTGACT GTAGGATGCTTCCCTTTAAGCAGAAGATGACAGGTTATTCAGATTTTGAA AAACAGATCCGATGTACCGGACCTGATCACCGTGTTGAAGGAAAAAGTTT GTTAATAGCTGTCTACCCCGAGGATCTGAACTGTGAAGAGCCAGCTTCAT TTTCCCTGCCAGTGTTTCTCAGTGCGCTAGGGGGCGTGGTAGTCGGTATC CTCCTCGCCCTGTCCGTTTTCCTTATAATATGGAGCAGAAACAGGAAGTT AAGAACCATTTCTACTCCTAAATCCGTGCCTGTCGCTTCCCCAGACGTAC CAGGCAGTAACCGTGACTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
Sc0000003 | genome | Sc0000003:601475..603495 - |
Properties
Property Name | Value |
Transcript id | BL73895_cuf0 |
Biotype | protein_coding |
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