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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL73867_cuf1 >transcript:BL73867_cuf1-protein ID=transcript:BL73867_cuf1-protein|Name=transcript:BL73867_cuf1|organism=Branchiostoma lanceolatum|type=polypeptide|length=395bp
MGRAWFSKIYSLFANGKGLLASLAAAIGFTVSPVLSRRAADVGVPGFQLV
LVNELCKFALFVPLAFIFRAPLRGNDWKQTVLMVVNGGMRALGGTLLVLS
VILIPPGNALAISQGAAAPIYGMIVAWLIMREAPGWPNVIGIVFQLTGVA
MIVFGGTPVLDSSTEHSDSTCANDRNITMVPNVSTLPTGMISCNMTVDNI
TITTDRGMSGNLIHDPYAAYVVGNLFAVLYPLVLAFVDVLNRKNMRNNAK
LTCIVLVEGWGFVIILPIMFLTSTPKWDLELELVFSLIGQGVILTLAVGC
LYHGLDSEKAATVYIMLGLSTVLGYVLQYLVIHITPQTLELLGASIIVLA
IVLVFLFTWRQRARKKEATIEEENEKVQINNELNEIQFHWFESSV Run BLAST on NCBI mRNA from alignment at Sc0000033:1208902..1212602- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL73867_cuf1 ID=transcript:BL73867_cuf1|Name=transcript:BL73867_cuf1|organism=Branchiostoma lanceolatum|type=mRNA|length=3701bp|location=Sequence derived from alignment at Sc0000033:1208902..1212602- (Branchiostoma lanceolatum)
ACAACAGATCCAACAAAGGTAGCTTGTGTTTACACAAGCTCTCGGCCGGA
GGTTACTGACCCCGGCGGTCACAGGACCGGCTGGCCACTAGGAGCGCGAT
TCCTGAGCGGGACAAAAAACAGACGCCACCACGATGGGGAGGGCATGGTT
CTCAAAAATCTACAGCCTATTCGCCAACGGAAAAGGCCTCCTGGCATCGC
TGGCTGCTGCGATAGGCTTCACCGTAAGCCCCGTGCTGAGCAGGCGGGCT
GCAGACGTCGGCGTACCGGGCTTCCAGTTGGTCTTGGTGAACGAGCTCTG
TAAATTCGCCCTGTTCGTCCCTCTAGCTTTTATTTTCAGAGCCCCGCTGC
GAGGGAACGACTGGAAGCAGACTGTTCTCATGGTCGTTAACGGCGGAATG
AGAGCGCTGGGAGGAACGCTTTTGGTGTTGTCCGTTATTTTGATTCCACC
GGGTAAGAATATTAATGTGTATGTATATAGGTAATGATTGATAATCATCA
TCATCATCATGGGGTAACCCCATATAACCCCATCAGGGGCAAAGTGGGGG
GGGGGGGGTTGAGGTCCCGGTCTAAGGCGGAATGGTACGGGGAAAGTATG
AGCGTTTGTTCTGGCGTTGATGGTTTAAACTTTGAGATGGTGACTCTGAT
GATAATGCCTTTGTAAATAACTCATTTATTTAGACAATGTGCTGGGGACG
CTTTACTGCCAAGAGGTATACCGAAAGGCTCAAAATAGATTACTAATTAA
CTTAATTTAAAAAGTGGAAGGGTTGGTTCCGGGCGAGCCCATTTCGCGAC
TGGGGGCTATAGGGGAGGCAAACACCAGTGTCATGATACTAACGTTAGTA
CTACTTTATCAGATACTAGTACGTTGACATAGCCCTCTTTACGCTATGCG
GACTTTGACTGTTATCAATTATACCATACGCTGTTGCTGATCGAGTCAGT
GATGTTGTGTTGAAATAGAAACGACTGTAGCTAACTGTAACTAATTAAGT
TACTCTGATTTGAGGTGGTCCGACTATTTACCGGAATATACTGGAATACA
CATAAAAATACTGAAATACAGTATGTCTTGAGGGTTTAGATTAAATTTTA
ATTACTATGTATAGTTTGGACTGGTCATGTGCGCTTATTACTCAGACTAC
GCTAAACAACATTCTAGCCTTTAAAACAAACATGGCGACGGGCTGGGATG
TTTGTTTGTGTTACACAAACACCGCGGTCCTTAATTTGACCCCTCCCGAT
TTTTATCAATATGAATTGAAATAGTAAAATATATGTACATGTTGGCATTG
CAGTGGACAATATATCATTATGCTTAAACGGTGGAAATCCACCAATCACT
ATCTCACCCCATACTACTTTTGTAAAGTATTTAATGTCATAGAAATTATG
GTTCACATGGTTATGCCAAACTTTACAATTGGACCCCGTGTAACTTTTTA
TCCATTATAATATCATTGGGTATGGTAATCACGGTCTTGTTTCTCTTATC
TTATGTTGCTATTTTTATTTCGCCTTTCCAGGGAACGCATTAGCTATCAG
TCAGGGGGCAGCAGCACCCATATATGGTATGATACTGGCCTGGTTGATCA
TGAGAGAGGCGCCGGGATGGCCGAACGTCATCGGCATCGTCTTCCAACTC
ACGGGCGTCGCCATGATTGTTTTCGGTGGAACACCAGTCCTAGATTCGTC
GACAGAACATTCGGATTCGACCTGTGCAAACGACCGGAATATCACCATGG
TGCCAAACGTTAGCACGTTACCGACAGGCATGATATCTTGCAACATGACT
GTTGATAACATTACTATCACAACTGACAGAGGAATGTCTGGAAACCTTAT
ACACGATCCCTACGCAGCATATGTTGTTGGAAACCTTTTTGCTGTTCTAT
ACCCGTTAGTACTGGCGTTCGTTGATGTCTTAAACAGAAANAATTAACTT
AATTTAAAAAGTGGAAGGGTTGGTTCCGGGCGAGCCCATTTCGCGACTGG
GGGCTATAGGGGAGGCAAACACCAGTGTCATGATACTAACGTTAGTACTA
CTTTATCAGATACTAGTACGTTGACATAGCCCTCTTTACGCTATGCGGAC
TTTGACTGTTATCAATTATACCATACGCTGTTGCTGATCGAGTCAGTGAT
GTTGTGTTGAAATAGAAACGACTGTAGCTAACTGTAACTAATTAAGTTAC
TCTGATTTGAGGTGGTCCGACTATTTACCGGAATATACTGGAATACACAT
AAAAATACTGAAATACAGTATGTCTTGAGGGTTTAGATTAAATTTTAATT
ACTATGTATAGTTTGGACTGGTCATGTGCGCTTATTACTCAGACTACGCT
AAACAACATTCTAGCCTTTAAAACAAACATGGCGACGGGCTGGGATGTTT
GTTTGTGTTACACAAACACCGCGGTCCTTAATTTGACCCCTCCCGATTTT
TATCAATATGAATTGAAATAGTAAAATATATGTACATGTTGGCATTGCAG
TGGACAATATATCATTATGCTTAAACGGTGGAAATCCACCAATCACTATC
TCACCCCATACTACTTTTGTAAAGTATTTAATGTCATAGAAATTATGGTT
CACATGGTTATGCCAAACTTTACAATTGGACCCCGTGTAACTTTTTATCC
ATTATAATATCATTGGGTATGGTAATCACGGTCTTGTTTCTCTTATCTTA
TGTTGCTATTTTTATTTCGCCTTTCCAGGGAACGCATTAGCTATCAGTCA
GGGGGCAGCAGCACCCATATATGGTATGATAGTGGCCTGGTTGATCATGA
GAGAGGCGCCGGGATGGCCGAACGTCATCGGCATCGTCTTCCAACTCACG
GGCGTCGCCATGATTGTTTTCGGTGGAACACCAGTCCTAGATTCGTCGAC
AGAACATTCGGATTCGACCTGTGCAAACGACCGGAATATCACCATGGTGC
CAAACGTTAGCACGTTACCGACAGGCATGATATCTTGCAACATGACTGTT
GATAACATTACTATCACAACTGACAGAGGAATGTCTGGAAACCTTATACA
CGATCCCTACGCAGCATATGTTGTTGGAAACCTTTTTGCTGTTCTATACC
CGTTAGTACTGGCGTTCGTTGATGTCTTAAACAGAAAGAATATGAGAAAC
AATGCCAAGCTGACATGCATTGTGCTTGTGGAGGGTTGGGGGTTTGTTAT
CATCCTTCCAATCATGTTCCTGACTTCAACACCGAAATGGGATCTCGAAC
TAGAACTTGTTTTCAGTCTTATAGGGCAAGGTGTGATTTTGACTTTGGCG
GTAGGGTGCCTATACCATGGACTTGACTCAGAGAAAGCGGCGACTGTGTA
CATCATGTTAGGCCTTAGCACGGTGCTAGGGTACGTACTACAATACCTTG
TTATTCATATCACTCCGCAGACGTTAGAACTATTGGGAGCGTCCATTATA
GTGTTGGCAATTGTTCTTGTTTTCCTGTTTACGTGGAGACAACGTGCGAG
AAAGAAAGAGGCTACAATAGAGGAAGAAAATGAGAAAGTACAAATCAACA
ATGAACTTAATGAGATACAGTTCCATTGGTTTGAATCATCTGTATAAGAC
GAAGAAATAGACAGATTGGAATTTTGATTTTTTATTCTTTCTGGACTATA
TGAATATTGCACAGAAACTGCGATAATAAAAGGCCGGCGTGTGGCGGAAA
G Coding sequence (CDS) from alignment at Sc0000033:1208902..1212602- >transcript:BL73867_cuf1 ID=transcript:BL73867_cuf1|Name=transcript:BL73867_cuf1|organism=Branchiostoma lanceolatum|type=CDS|length=2376bp|location=Sequence derived from alignment at Sc0000033:1208902..1212602- (Branchiostoma lanceolatum)
ATGGGGAGGGCATGGTTCTCAAAAATCTACAGCCTATTCGCCAACGGAAA
AGGCCTCCTGGCATCGCTGGCTGCTGCGATAGGCTTCACCGTAAGCCCCG
TGCTGAGCAGGCGGGCTGCAGACGTCGGCGTACCGGGCTTCCAGTTGGTC
TTGGTGAACGAGCTCTGTAAATTCGCCCTGTTCGTCCCTCTAGCTTTTAT
TTTCAGAGCCCCGCTGCGAGGGAACGACTGGAAGCAGACTGTTCTCATGG
TCGTTAACGGCGGAATGAGAGCGCTGGGAGGAACGCTTTTGGTGTTGTCC
GTTATTTTGATTCCACCGGGGAACGCATTAGCTATCAGTCAGGGGGCAGC
AGCACCCATATATGGTATGATAGTGGCCTGGTTGATCATGAGAGAGGCGC
CGGGATGGCCGAACGTCATCGGCATCGTCTTCCAACTCACGGGCGTCGCC
ATGATTGTTTTCGGTGGAACACCAGTCCTAGATTCGTCGACAGAACATTC
GGATTCGACCTGTGCAAACGACCGGAATATCACCATGGTGCCAAACGTTA
GCACGTTACCGACAGGCATGATATCTTGCAACATGACTGTTGATAACATT
ACTATCACAACTGACAGAGGAATGTCTGGAAACCTTATACACGATCCCTA
CGCAGCATATGTTGTTGGAAACCTTTTTGCTGTTCTATACCCGTTAGTAC
TGGCGTTCGTTGATGTCTTAAACAGAAAGAATATGAGAAACAATGCCAAG
CTGACATGCATTGTGCTTGTGGAGGGTTGGGGGTTTGTTATCATCCTTCC
AATCATGTTCCTGACTTCAACACCGAAATGGGATCTCGAACTAGAACTTG
TTTTCAGTCTTATAGGGCAAGGTGTGATTTTGACTTTGGCGGTAGGGTGC
CTATACCATGGACTTGACTCAGAGAAAGCGGCGACTGTGTACATCATGTT
AGGCCTTAGCACGGTGCTAGGGTACGTACTACAATACCTTGTTATTCATA
TCACTCCGCAGACGTTAGAACTATTGGGAGCGTCCATTATAGTGTTGGCA
ATTGTTCTTGTTTTCCTGTTTACGTGGAGACAACGTGCGAGAAAGAAAGA
GGCTACAATAGAGGAAGAAAATGAGAAAGTACAAATCAACAATGAACTTA
ATGAGATACAGTTCCATTGGTTTGAATCATCTGTATAAATGGGGAGGGCA
TGGTTCTCAAAAATCTACAGCCTATTCGCCAACGGAAAAGGCCTCCTGGC
ATCGCTGGCTGCTGCGATAGGCTTCACCGTAAGCCCCGTGCTGAGCAGGC
GGGCTGCAGACGTCGGCGTACCGGGCTTCCAGTTGGTCTTGGTGAACGAG
CTCTGTAAATTCGCCCTGTTCGTCCCTCTAGCTTTTATTTTCAGAGCCCC
GCTGCGAGGGAACGACTGGAAGCAGACTGTTCTCATGGTCGTTAACGGCG
GAATGAGAGCGCTGGGAGGAACGCTTTTGGTGTTGTCCGTTATTTTGATT
CCACCGGGGAACGCATTAGCTATCAGTCAGGGGGCAGCAGCACCCATATA
TGGTATGATAGTGGCCTGGTTGATCATGAGAGAGGCGCCGGGATGGCCGA
ACGTCATCGGCATCGTCTTCCAACTCACGGGCGTCGCCATGATTGTTTTC
GGTGGAACACCAGTCCTAGATTCGTCGACAGAACATTCGGATTCGACCTG
TGCAAACGACCGGAATATCACCATGGTGCCAAACGTTAGCACGTTACCGA
CAGGCATGATATCTTGCAACATGACTGTTGATAACATTACTATCACAACT
GACAGAGGAATGTCTGGAAACCTTATACACGATCCCTACGCAGCATATGT
TGTTGGAAACCTTTTTGCTGTTCTATACCCGTTAGTACTGGCGTTCGTTG
ATGTCTTAAACAGAAAGAATATGAGAAACAATGCCAAGCTGACATGCATT
GTGCTTGTGGAGGGTTGGGGGTTTGTTATCATCCTTCCAATCATGTTCCT
GACTTCAACACCGAAATGGGATCTCGAACTAGAACTTGTTTTCAGTCTTA
TAGGGCAAGGTGTGATTTTGACTTTGGCGGTAGGGTGCCTATACCATGGA
CTTGACTCAGAGAAAGCGGCGACTGTGTACATCATGTTAGGCCTTAGCAC
GGTGCTAGGGTACGTACTACAATACCTTGTTATTCATATCACTCCGCAGA
CGTTAGAACTATTGGGAGCGTCCATTATAGTGTTGGCAATTGTTCTTGTT
TTCCTGTTTACGTGGAGACAACGTGCGAGAAAGAAAGAGGCTACAATAGA
GGAAGAAAATGAGAAAGTACAAATCAACAATGAACTTAATGAGATACAGT
TCCATTGGTTTGAATCATCTGTATAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| Sc0000033 | genome | Sc0000033:1208902..1212602 - |
Properties
| Property Name | Value |
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| Transcript id | BL73867_cuf1 |
| Biotype | protein_coding |
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