transcript:BL73865_cuf0 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL73865_cuf0
Unique Nametranscript:BL73865_cuf0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



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Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL73865_cuf0

>transcript:BL73865_cuf0-protein ID=transcript:BL73865_cuf0-protein|Name=transcript:BL73865_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=156bp
PGTVHPFLPAPEFVLQRPHRESTDRNDSPPPPPHFPPVTPGLAREAPRDA
RDFGSHVSSRELRKQLLHEQSFLSARLSEQSFLSARLSPSPPVPTWTRGC
DVHLQQLAQGYQYTHSTSTRSLLPARLGVRGARQRPAARSSPAWDRRTAT
TELRVE
Run BLAST on NCBI

mRNA from alignment at Sc0000027:2037824..2038569-

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL73865_cuf0 ID=transcript:BL73865_cuf0|Name=transcript:BL73865_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=746bp|location=Sequence derived from alignment at Sc0000027:2037824..2038569- (Branchiostoma lanceolatum)
AGCCTGGGACCGTGCACCCGTTCCTGCCTGCTCCTGAGTTTGTGCTTCAA
CGTCCACACAGAGAGTCTACAGACCGGAACGACAGCCCCCCTCCCCCTCC
CCATTTCCCGCCGGTGACGCCGGGTCTCGCGAGAGAGGCTCCGCGAGATG
CCCGAGACTTTGGCAGCCATGTTTCTTCTCGTGAACTACGTAAACAACTT
CTCCACGAGCAGTCCTTCCTCAGCGCCCGCCTTTCNGAGCAATCCTTCCT
CAGCGCCCGCCTTTCTCCCTCCCCACCCGTACCTACATGGACTCGAGGCT
GCGATGTGCATCTACAGCAGCTTGCACAAGGCTACCAGTACACCCACTCC
ACGTCGACGCGAAGTTTACTTCCGGCCCGACTCGGAGTTCGCGGCGCGCG
GCAGCGCCCTGCGGCGAGATCCTCTCCAGCCTGGGATCGCCGAACCGCAA
CTACTGAACTTAGAGTAGAGTAGAATAGATTAGAGTAGTTTAGCACAGCC
AGATTGACAGTGCATCAAGACCAGCTCCAGCTGTGCACCGAAGACCCCCA
GTACCCGCCCACGGCCCACTTCACAGTACTAAGTGAGAGCTACACGCCGA
CGCACTATTTCCGGCCTGACTCTACGCTGTTCGACAGTGCACGGTGACGT
CTGCGGCCTGTTCTTCGCCAGTCCTGGACTGTTTTGCATGAACTCGAATA
TCTAGCTACTTCCTAATTTAGATTTAGCACTACCCTACAACTAACT

Coding sequence (CDS) from alignment at Sc0000027:2037824..2038569-

>transcript:BL73865_cuf0 ID=transcript:BL73865_cuf0|Name=transcript:BL73865_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=471bp|location=Sequence derived from alignment at Sc0000027:2037824..2038569- (Branchiostoma lanceolatum)
CCTGGGACCGTGCACCCGTTCCTGCCTGCTCCTGAGTTTGTGCTTCAACG
TCCACACAGAGAGTCTACAGACCGGAACGACAGCCCCCCTCCCCCTCCCC
ATTTCCCGCCGGTGACGCCGGGTCTCGCGAGAGAGGCTCCGCGAGATGCC
CGAGACTTTGGCAGCCATGTTTCTTCTCGTGAACTACGTAAACAACTTCT
CCACGAGCAGTCCTTCCTCAGCGCCCGCCTTTCNGAGCAATCCTTCCTCA
GCGCCCGCCTTTCTCCCTCCCCACCCGTACCTACATGGACTCGAGGCTGC
GATGTGCATCTACAGCAGCTTGCACAAGGCTACCAGTACACCCACTCCAC
GTCGACGCGAAGTTTACTTCCGGCCCGACTCGGAGTTCGCGGCGCGCGGC
AGCGCCCTGCGGCGAGATCCTCTCCAGCCTGGGATCGCCGAACCGCAACT
ACTGAACTTAGAGTAGAGTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL73865gene:BL73865Branchiostoma lanceolatumgene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL73865_cuf0-E1BL73865_cuf0-E1-1564476830-168114Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL73865_cuf0transcript:BL73865_cuf0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000027genomeSc0000027:2037824..2038569 -
Properties
Property NameValue
Transcript idBL73865_cuf0
Biotypeprotein_coding