transcript:BL73814_cuf0 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL73814_cuf0
Unique Nametranscript:BL73814_cuf0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL73814_cuf0

>transcript:BL73814_cuf0-protein ID=transcript:BL73814_cuf0-protein|Name=transcript:BL73814_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=194bp
ELEHNAREAEEADTRYKSVEDKLNQNLKLVEEMKTEKQEDKIRLEQAEAS
MKSMREELEEKLHMIETELTQTQCSKSDVVQKLKEVEESNKDAENDKCKL
EQELKELKERVSKSASRLTEQEILVKELKNEKNEIAQKLKGSEKSKQDAE
NDKCKLRSELKELQDKFHQNLNLVDEMKTEKEKDKQALLATEAS
Run BLAST on NCBI

mRNA from alignment at xfSc0031509:1..584+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL73814_cuf0 ID=transcript:BL73814_cuf0|Name=transcript:BL73814_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=584bp|location=Sequence derived from alignment at xfSc0031509:1..584+ (Branchiostoma lanceolatum)
AGGAGCTGGAACATAATGCCAGAGAGGCAGAGGAAGCTGATACAAGGTAC AAAAGTGTTGAAGACAAGCTCAATCAGAATCTTAAGTTAGTCGAGGAGAT GAAGACAGAGAAGCAGGAAGACAAAATACGATTGGAACAAGCAGAAGCAT CGATGAAAAGCATGAGAGAAGAGCTCGAAGAGAAACTACATATGATCGAA ACAGAGCTCACTCAAACACAATGTTCAAAAAGTGACGTTGTCCAAAAATT GAAAGAAGTCGAAGAGTCCAACAAAGATGCCGAGAATGACAAATGTAAGT TAGAACAGGAATTGAAGGAATTGAAAGAAAGGGTTAGCAAATCCGCTTCA AGATTAACTGAGCAAGAAATATTGGTAAAAGAATTGAAGAACGAGAAGAA TGAGATTGCTCAAAAACTGAAAGGGTCAGAAAAGTCGAAACAAGATGCAG AGAATGACAAGTGTAAGTTGAGATCAGAATTGAAGGAGCTACAAGACAAG TTTCATCAGAATCTCAACTTAGTCGACGAGATGAAGACAGAGAAGGAGAA AGACAAACAAGCACTCCTGGCAACAGAAGCGTCC

Coding sequence (CDS) from alignment at xfSc0031509:1..584+

>transcript:BL73814_cuf0 ID=transcript:BL73814_cuf0|Name=transcript:BL73814_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=582bp|location=Sequence derived from alignment at xfSc0031509:1..584+ (Branchiostoma lanceolatum)
GAGCTGGAACATAATGCCAGAGAGGCAGAGGAAGCTGATACAAGGTACAA
AAGTGTTGAAGACAAGCTCAATCAGAATCTTAAGTTAGTCGAGGAGATGA
AGACAGAGAAGCAGGAAGACAAAATACGATTGGAACAAGCAGAAGCATCG
ATGAAAAGCATGAGAGAAGAGCTCGAAGAGAAACTACATATGATCGAAAC
AGAGCTCACTCAAACACAATGTTCAAAAAGTGACGTTGTCCAAAAATTGA
AAGAAGTCGAAGAGTCCAACAAAGATGCCGAGAATGACAAATGTAAGTTA
GAACAGGAATTGAAGGAATTGAAAGAAAGGGTTAGCAAATCCGCTTCAAG
ATTAACTGAGCAAGAAATATTGGTAAAAGAATTGAAGAACGAGAAGAATG
AGATTGCTCAAAAACTGAAAGGGTCAGAAAAGTCGAAACAAGATGCAGAG
AATGACAAGTGTAAGTTGAGATCAGAATTGAAGGAGCTACAAGACAAGTT
TCATCAGAATCTCAACTTAGTCGACGAGATGAAGACAGAGAAGGAGAAAG
ACAAACAAGCACTCCTGGCAACAGAAGCGTCC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL73814gene:BL73814Branchiostoma lanceolatumgene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL73814_cuf0-E1BL73814_cuf0-E1-1564476830-548175Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL73814_cuf0transcript:BL73814_cuf0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
xfSc0031509genomexfSc0031509:1..584 +
Properties
Property NameValue
Transcript idBL73814_cuf0
Biotypeprotein_coding