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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL73740_cuf3 >transcript:BL73740_cuf3-protein ID=transcript:BL73740_cuf3-protein|Name=transcript:BL73740_cuf3|organism=Branchiostoma lanceolatum|type=polypeptide|length=157bp
MTTIARPRVALFVVTVLIYMATLKFSYQRLLTWGQDATVPKPLLKSHLMK
SPVNPLPIEPDEVQPCLPNQPLVIDQVTYPKYTEIVVLNRDRRYRRGDVL
TVRVVARDKKRRPKTYGGDFFRARLISSDRSPKASSPGRVTDHCNGTYTV
QFPLFWV Run BLAST on NCBI mRNA from alignment at Sc0000282:36002..37586+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL73740_cuf3 ID=transcript:BL73740_cuf3|Name=transcript:BL73740_cuf3|organism=Branchiostoma lanceolatum|type=mRNA|length=1585bp|location=Sequence derived from alignment at Sc0000282:36002..37586+ (Branchiostoma lanceolatum)
GCTGACCTGTGCGCCACTAGGCGCTACAAGGTGAGCGACATTTTATATAT
CCGCGCGTCATAGGTAAATTAAGACCCCAGTCACACCTAAACCTGTTCTT
GACGTAATAGCACAAAGGTCACACCAAGGACACACAAACGGAGTTCGTCG
GACACACTAAGACATAGCACAACGAGACTGTACTCCATCCAAGTGCGTCG
TAGATGGGCGAACTACAACGTACCTGATAGCGTGTCTTAAAGGCATGTTG
ACGAGTTTAAATTCCTTATACAGTATTAGGATTAACGACTTTCTGCGTGT
GATCCTTTCTCGTCTGCGATGTGTGGCTCAATTTGTCTACAATGACGACC
ATTGCCCGGCCGAGAGTTGCTCTGTTTGTGGTGACCGTCCTGATTTACAT
GGCGGTATGTAATTTTCACCTTGCTACATATGGTTACACTAGAGCGATAT
CATGCTTCCCCCGAGTAAACATCATCATCAATCAAAAACATGTCTGGGTA
TGCCGCTTTATACCCTGCGGCTGCCGCTCCACTACCGCATTCTTTCGCGG
GCATGCAACATACAGCAAACACGATATCATTTAGTAACAAATGGACTGTA
GAAACAGGAGGGTATGAAAAAAAATCTCCAGGACCACAGGTTCTGTCCTT
TGTGTTGAATTGTAATGAAAAAAGAACGTCATTTCATTCGTCATGGATCG
TTCAAAATATAGTGATGATTATTACTACCTTCGCCAAGAAGGTTATATTT
TTTGTGGCGTTTTACCATGTATGTATGTTTGCTTGTAGCTTTGTACTTAG
CAGCATAACTCAAGAACTGATGAATGGTTCGTTATGAAATTTGGTAAGTG
GTTAGGTCCTGTCCCATCGACGAAACCATTAGATTTTGGACCCCTTTGGG
CTTTCATTGGCACTGCAGCAGAACTGCTTTCTCGGTGTTCTGGACAAGCG
AGCTATGATCACGATTTTTGGGTGGTGGATACGAATGCGCTCTTGCGCTC
GCGAAGAAGCGGCATACTTTTACGCCTTACTATGTGTAAACAGGGAAATA
CTTAGAGAATGTTAAGATCTTAGAAACTGTAGTGTAAATATTGTTAAAAA
AAACGACCGTACAGACGACCGATTCATTGAATTATGCTAACAAGTGTAAA
GACGTTGTTCTTCATATGTCTTGCAGACGTTGAAGTTTTCCTATCAACGA
TTACTGACCTGGGGACAGGACGCTACAGTTCCCAAGCCGTTGTTGAAATC
TCACCTAATGAAGTCACCAGTCAACCCTCTCCCCATTGAGCCAGACGAAG
TCCAACCTTGCCTCCCCAACCAGCCTCTCGTCATCGACCAGGTCACCTAC
CCAAAGTACACGGAGATTGTCGTGTTAAATAGAGACAGACGGTATCGCCG
AGGAGACGTTCTTACCGTGAGGGTGGTGGCGAGAGACAAGAAACGACGGC
CGAAGACGTACGGAGGAGACTTTTTCCGTGCCAGACTCATCAGCAGCGAC
CGCTCTCCAAAGGCCAGTAGCCCCGGTCGCGTCACTGACCACTGTAACGG
CACCTACACCGTGCAGTTTCCGCTCTTCTGGGTCG Coding sequence (CDS) from alignment at Sc0000282:36002..37586+ >transcript:BL73740_cuf3 ID=transcript:BL73740_cuf3|Name=transcript:BL73740_cuf3|organism=Branchiostoma lanceolatum|type=CDS|length=942bp|location=Sequence derived from alignment at Sc0000282:36002..37586+ (Branchiostoma lanceolatum)
ATGACGACCATTGCCCGGCCGAGAGTTGCTCTGTTTGTGGTGACCGTCCT
GATTTACATGGCGACGTTGAAGTTTTCCTATCAACGATTACTGACCTGGG
GACAGGACGCTACAGTTCCCAAGCCGTTGTTGAAATCTCACCTAATGAAG
TCACCAGTCAACCCTCTCCCCATTGAGCCAGACGAAGTCCAACCTTGCCT
CCCCAACCAGCCTCTCGTCATCGACCAGGTCACCTACCCAAAGTACACGG
AGATTGTCGTGTTAAATAGAGACAGACGGTATCGCCGAGGAGACGTTCTT
ACCGTGAGGGTGGTGGCGAGAGACAAGAAACGACGGCCGAAGACGTACGG
AGGAGACTTTTTCCGTGCCAGACTCATCAGCAGCGACCGCTCTCCAAAGG
CCAGTAGCCCCGGTCGCGTCACTGACCACTGTAACGGCACCTACACCGTG
CAGTTTCCGCTCTTCTGGGTCATGACGACCATTGCCCGGCCGAGAGTTGC
TCTGTTTGTGGTGACCGTCCTGATTTACATGGCGACGTTGAAGTTTTCCT
ATCAACGATTACTGACCTGGGGACAGGACGCTACAGTTCCCAAGCCGTTG
TTGAAATCTCACCTAATGAAGTCACCAGTCAACCCTCTCCCCATTGAGCC
AGACGAAGTCCAACCTTGCCTCCCCAACCAGCCTCTCGTCATCGACCAGG
TCACCTACCCAAAGTACACGGAGATTGTCGTGTTAAATAGAGACAGACGG
TATCGCCGAGGAGACGTTCTTACCGTGAGGGTGGTGGCGAGAGACAAGAA
ACGACGGCCGAAGACGTACGGAGGAGACTTTTTCCGTGCCAGACTCATCA
GCAGCGACCGCTCTCCAAAGGCCAGTAGCCCCGGTCGCGTCACTGACCAC
TGTAACGGCACCTACACCGTGCAGTTTCCGCTCTTCTGGGTC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000282 | genome | Sc0000282:36002..37586 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL73740_cuf3 |
| Biotype | protein_coding |
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